RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ANKLE2Q86XL3 938 aa27.7■■■□□ 2.02
CLPTM1-209ENST00000588855 PPLO60437 1756 aa27.7■■■□□ 2.02
CLPTM1-209ENST00000588855 IFT172Q9UG01 1749 aa27.69■■■□□ 2.02
CLPTM1-209ENST00000588855 TXNDC2Q86VQ3 553 aa27.68■■■□□ 2.02
CLPTM1-209ENST00000588855 RGL3Q3MIN7 710 aa27.67■■■□□ 2.02
CLPTM1-209ENST00000588855 EID1Q9Y6B2 187 aa27.67■■■□□ 2.02
CLPTM1-209ENST00000588855 IQGAP1P46940 1657 aa27.66■■■□□ 2.02
CLPTM1-209ENST00000588855 NUTM2DQ5VT03 806 aaPredicted RBP27.66■■■□□ 2.02
CLPTM1-209ENST00000588855 SIN3AQ96ST3 1273 aa27.66■■■□□ 2.02
CLPTM1-209ENST00000588855 MED14O60244 1454 aa27.65■■■□□ 2.02
CLPTM1-209ENST00000588855 NPHP4O75161 1426 aaPredicted RBP27.63■■■□□ 2.01
CLPTM1-209ENST00000588855 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.62■■■□□ 2.01
CLPTM1-209ENST00000588855 PPP1R15AO75807 674 aaPredicted RBP27.61■■■□□ 2.01
CLPTM1-209ENST00000588855 RPGRIP1LQ68CZ1 1315 aa27.6■■■□□ 2.01
CLPTM1-209ENST00000588855 HDGFP51858 240 aaKnown RBP27.6■■■□□ 2.01
CLPTM1-209ENST00000588855 PLEKHG1Q9ULL1 1385 aa27.58■■■□□ 2.01
CLPTM1-209ENST00000588855 NEUROD1Q13562 356 aa27.58■■■□□ 2.01
CLPTM1-209ENST00000588855 SENP3Q9H4L4 574 aaPredicted RBP27.57■■■□□ 2
CLPTM1-209ENST00000588855 CCER1Q8TC90 406 aaPredicted RBP27.57■■■□□ 2
CLPTM1-209ENST00000588855 NRXN3Q9Y4C0 1643 aa27.55■■■□□ 2
CLPTM1-209ENST00000588855 DMRT2Q9Y5R5 561 aa27.55■■■□□ 2
CLPTM1-209ENST00000588855 MYOM2P54296 1465 aa27.53■■■□□ 2
CLPTM1-209ENST00000588855 SETBP1Q9Y6X0 1596 aa27.53■■■□□ 2
CLPTM1-209ENST00000588855 VGFO15240 615 aaPredicted RBP27.51■■■□□ 2
CLPTM1-209ENST00000588855 CLSPNQ9HAW4 1339 aa27.51■■■□□ 2
CLPTM1-209ENST00000588855 ADGRF5Q8IZF2 1346 aa27.5■■□□□ 1.99
CLPTM1-209ENST00000588855 BCANQ96GW7 911 aa27.5■■□□□ 1.99
CLPTM1-209ENST00000588855 ADAMTS13Q76LX8 1427 aa27.49■■□□□ 1.99
CLPTM1-209ENST00000588855 DCAF11Q8TEB1 546 aa27.48■■□□□ 1.99
CLPTM1-209ENST00000588855 SLC26A8Q96RN1 970 aa27.47■■□□□ 1.99
CLPTM1-209ENST00000588855 DIP2AQ14689 1571 aa27.47■■□□□ 1.99
CLPTM1-209ENST00000588855 NRXN1Q9ULB1 1477 aa27.47■■□□□ 1.99
CLPTM1-209ENST00000588855 SETD1AO15047 1707 aaKnown RBP27.46■■□□□ 1.99
CLPTM1-209ENST00000588855 PIK3C2GO75747 1445 aa27.45■■□□□ 1.99
CLPTM1-209ENST00000588855 KDM2AQ9Y2K7 1162 aa27.45■■□□□ 1.98
CLPTM1-209ENST00000588855 L3MBTL2Q969R5 705 aa27.44■■□□□ 1.98
CLPTM1-209ENST00000588855 TONSLQ96HA7 1378 aa27.43■■□□□ 1.98
CLPTM1-209ENST00000588855 ALKQ9UM73 1620 aa27.43■■□□□ 1.98
CLPTM1-209ENST00000588855 STRCP1A6NGW2 1772 aa27.4■■□□□ 1.98
CLPTM1-209ENST00000588855 TBX22Q9Y458 520 aa27.39■■□□□ 1.98
CLPTM1-209ENST00000588855 LAMC1P11047 1609 aa27.39■■□□□ 1.97
CLPTM1-209ENST00000588855 ZNF335Q9H4Z2 1342 aaPredicted RBP27.39■■□□□ 1.97
CLPTM1-209ENST00000588855 STAC3Q96MF2 364 aa27.38■■□□□ 1.97
CLPTM1-209ENST00000588855 CHD2O14647 1828 aaKnown RBP27.37■■□□□ 1.97
CLPTM1-209ENST00000588855 NWD1Q149M9 1564 aa27.35■■□□□ 1.97
CLPTM1-209ENST00000588855 PRAG1Q86YV5 1406 aa27.35■■□□□ 1.97
CLPTM1-209ENST00000588855 METP08581 1390 aa27.34■■□□□ 1.97
CLPTM1-209ENST00000588855 ASXL1Q8IXJ9 1541 aa27.34■■□□□ 1.97
CLPTM1-209ENST00000588855 LTBP4Q8N2S1 1624 aa27.33■■□□□ 1.97
CLPTM1-209ENST00000588855 PIK3R4Q99570 1358 aa27.32■■□□□ 1.96
CLPTM1-209ENST00000588855 PTPRUQ92729 1446 aa27.31■■□□□ 1.96
CLPTM1-209ENST00000588855 KIAA1210Q9ULL0 1709 aa27.31■■□□□ 1.96
CLPTM1-209ENST00000588855 CFAP70Q5T0N1 1121 aa27.31■■□□□ 1.96
CLPTM1-209ENST00000588855 XRN1Q8IZH2 1706 aaKnown RBP27.3■■□□□ 1.96
CLPTM1-209ENST00000588855 C14orf93Q9H972 538 aaKnown RBP27.3■■□□□ 1.96
CLPTM1-209ENST00000588855 TRPM1Q7Z4N2 1603 aa27.27■■□□□ 1.96
CLPTM1-209ENST00000588855 KCNA6P17658 529 aa27.26■■□□□ 1.96
CLPTM1-209ENST00000588855 ADGRB1O14514 1584 aa27.26■■□□□ 1.95
CLPTM1-209ENST00000588855 CPS1P31327 1500 aa27.26■■□□□ 1.95
CLPTM1-209ENST00000588855 TMEM132EQ6IEE7 984 aa27.24■■□□□ 1.95
CLPTM1-209ENST00000588855 TIMELESSQ9UNS1 1208 aa27.24■■□□□ 1.95
CLPTM1-209ENST00000588855 NKTRP30414 1462 aaKnown RBP27.24■■□□□ 1.95
CLPTM1-209ENST00000588855 NBPF8Q3BBV2 869 aa27.22■■□□□ 1.95
CLPTM1-209ENST00000588855 AMOTL2Q9Y2J4 779 aa27.22■■□□□ 1.95
CLPTM1-209ENST00000588855 KNDC1Q76NI1 1749 aa27.22■■□□□ 1.95
CLPTM1-209ENST00000588855 YTHDC2Q9H6S0 1430 aaKnown RBP27.2■■□□□ 1.94
CLPTM1-209ENST00000588855 LRRC7Q96NW7 1537 aa27.2■■□□□ 1.94
CLPTM1-209ENST00000588855 XIRP1Q702N8 1843 aaKnown RBP27.2■■□□□ 1.94
CLPTM1-209ENST00000588855 LRPPRCP42704 1394 aaKnown RBP27.18■■□□□ 1.94
CLPTM1-209ENST00000588855 NBPF1Q3BBV0 1214 aa27.17■■□□□ 1.94
CLPTM1-209ENST00000588855 STK26Q9P289 416 aa27.16■■□□□ 1.94
CLPTM1-209ENST00000588855 TECPR2O15040 1411 aa27.15■■□□□ 1.94
CLPTM1-209ENST00000588855 PTCH1Q13635 1447 aa27.15■■□□□ 1.94
CLPTM1-209ENST00000588855 RALGAPBQ86X10 1494 aa27.14■■□□□ 1.94
CLPTM1-209ENST00000588855 ROBO2Q9HCK4 1378 aa27.13■■□□□ 1.93
CLPTM1-209ENST00000588855 ABCC11Q96J66 1382 aa27.13■■□□□ 1.93
CLPTM1-209ENST00000588855 PROSER2Q86WR7 435 aaPredicted RBP27.12■■□□□ 1.93
CLPTM1-209ENST00000588855 RBM33Q96EV2 1170 aaKnown RBP27.12■■□□□ 1.93
CLPTM1-209ENST00000588855 TMEM94Q12767 1356 aa27.12■■□□□ 1.93
CLPTM1-209ENST00000588855 ROCK2O75116 1388 aaKnown RBP27.11■■□□□ 1.93
CLPTM1-209ENST00000588855 ARHGEF28Q8N1W1 1705 aaKnown RBP27.11■■□□□ 1.93
CLPTM1-209ENST00000588855 DLC1Q96QB1 1528 aa27.1■■□□□ 1.93
CLPTM1-209ENST00000588855 CERKQ8TCT0 537 aa27.09■■□□□ 1.93
CLPTM1-209ENST00000588855 GPRASP1Q5JY77 1395 aa27.07■■□□□ 1.92
CLPTM1-209ENST00000588855 TRAK1Q9UPV9 953 aa27.07■■□□□ 1.92
CLPTM1-209ENST00000588855 NALCNQ8IZF0 1738 aa27.07■■□□□ 1.92
CLPTM1-209ENST00000588855 IQSEC2Q5JU85 1478 aa27.06■■□□□ 1.92
CLPTM1-209ENST00000588855 PLEKHH1Q9ULM0 1364 aa27.05■■□□□ 1.92
CLPTM1-209ENST00000588855 FAM135BQ49AJ0 1406 aa27.04■■□□□ 1.92
CLPTM1-209ENST00000588855 WAPLQ7Z5K2 1190 aa27.03■■□□□ 1.92
CLPTM1-209ENST00000588855 NCOA3Q9Y6Q9 1424 aa27.03■■□□□ 1.92
CLPTM1-209ENST00000588855 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.02■■□□□ 1.92
CLPTM1-209ENST00000588855 SIRT1Q96EB6 747 aa27■■□□□ 1.91
CLPTM1-209ENST00000588855 PRAM1Q96QH2 718 aa27■■□□□ 1.91
CLPTM1-209ENST00000588855 ADGRL3Q9HAR2 1447 aa27■■□□□ 1.91
CLPTM1-209ENST00000588855 CARD11Q9BXL7 1154 aa27■■□□□ 1.91
CLPTM1-209ENST00000588855 C14orf37Q86TY3 774 aa26.99■■□□□ 1.91
CLPTM1-209ENST00000588855 SAFB2Q14151 953 aaKnown RBP eCLIP26.97■■□□□ 1.91
CLPTM1-209ENST00000588855 MSH6P52701 1360 aa26.96■■□□□ 1.91
CLPTM1-209ENST00000588855 POGKQ9P215 609 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms