RNA–Protein interactions for RNA: ENST00000588260.1

AC003043.1-201, humanhuman

TSL 3 BASIC

Gene AC003043.1, Length 337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003043.1-201ENST00000588260 TRPM2O94759 1503 aa20.58■□□□□ 0.88
AC003043.1-201ENST00000588260 RIMS2Q9UQ26 1411 aa20.56■□□□□ 0.88
AC003043.1-201ENST00000588260 PPP1R15AO75807 674 aaPredicted RBP20.56■□□□□ 0.88
AC003043.1-201ENST00000588260 CLTCL1P53675 1640 aa20.54■□□□□ 0.88
AC003043.1-201ENST00000588260 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.54■□□□□ 0.88
AC003043.1-201ENST00000588260 BCANQ96GW7 911 aa20.54■□□□□ 0.88
AC003043.1-201ENST00000588260 RAB3GAP2Q9H2M9 1393 aa20.54■□□□□ 0.88
AC003043.1-201ENST00000588260 ZFYVE9O95405 1425 aa20.53■□□□□ 0.88
AC003043.1-201ENST00000588260 CPS1P31327 1500 aa20.53■□□□□ 0.88
AC003043.1-201ENST00000588260 IQSEC2Q5JU85 1478 aa20.53■□□□□ 0.88
AC003043.1-201ENST00000588260 KIF1BO60333 1816 aa20.53■□□□□ 0.88
AC003043.1-201ENST00000588260 MPHOSPH9Q99550 1183 aa20.52■□□□□ 0.88
AC003043.1-201ENST00000588260 ZNF326Q5BKZ1 582 aaKnown RBP20.5■□□□□ 0.87
AC003043.1-201ENST00000588260 PLEKHG1Q9ULL1 1385 aa20.48■□□□□ 0.87
AC003043.1-201ENST00000588260 SLC26A8Q96RN1 970 aa20.47■□□□□ 0.87
AC003043.1-201ENST00000588260 NUTM2DQ5VT03 806 aaPredicted RBP20.46■□□□□ 0.87
AC003043.1-201ENST00000588260 STRCP1A6NGW2 1772 aa20.45■□□□□ 0.86
AC003043.1-201ENST00000588260 CCDC144AA2RUR9 1427 aa20.44■□□□□ 0.86
AC003043.1-201ENST00000588260 HRCP23327 699 aa20.43■□□□□ 0.86
AC003043.1-201ENST00000588260 DIP2AQ14689 1571 aa20.41■□□□□ 0.86
AC003043.1-201ENST00000588260 NEXMIFQ5QGS0 1516 aa20.4■□□□□ 0.86
AC003043.1-201ENST00000588260 LRRC7Q96NW7 1537 aa20.39■□□□□ 0.85
AC003043.1-201ENST00000588260 UBAP1LF5GYI3 381 aa20.39■□□□□ 0.85
AC003043.1-201ENST00000588260 KCNA6P17658 529 aa20.39■□□□□ 0.85
AC003043.1-201ENST00000588260 TBX22Q9Y458 520 aa20.38■□□□□ 0.85
AC003043.1-201ENST00000588260 RPGRIP1LQ68CZ1 1315 aa20.37■□□□□ 0.85
AC003043.1-201ENST00000588260 NWD1Q149M9 1564 aa20.36■□□□□ 0.85
AC003043.1-201ENST00000588260 ADAMTS13Q76LX8 1427 aa20.36■□□□□ 0.85
AC003043.1-201ENST00000588260 SETBP1Q9Y6X0 1596 aa20.35■□□□□ 0.85
AC003043.1-201ENST00000588260 CHD2O14647 1828 aaKnown RBP20.35■□□□□ 0.85
AC003043.1-201ENST00000588260 VGFO15240 615 aaPredicted RBP20.35■□□□□ 0.85
AC003043.1-201ENST00000588260 NKTRP30414 1462 aaKnown RBP20.35■□□□□ 0.85
AC003043.1-201ENST00000588260 PPLO60437 1756 aa20.34■□□□□ 0.85
AC003043.1-201ENST00000588260 TOM1O60784 492 aa20.33■□□□□ 0.85
AC003043.1-201ENST00000588260 PROSER2Q86WR7 435 aaPredicted RBP20.33■□□□□ 0.85
AC003043.1-201ENST00000588260 PIK3R4Q99570 1358 aa20.33■□□□□ 0.84
AC003043.1-201ENST00000588260 NRXN3Q9Y4C0 1643 aa20.32■□□□□ 0.84
AC003043.1-201ENST00000588260 MSH5O43196 834 aa20.32■□□□□ 0.84
AC003043.1-201ENST00000588260 SPATA31E1Q6ZUB1 1445 aa20.31■□□□□ 0.84
AC003043.1-201ENST00000588260 RGL3Q3MIN7 710 aa20.31■□□□□ 0.84
AC003043.1-201ENST00000588260 XIRP1Q702N8 1843 aaKnown RBP20.3■□□□□ 0.84
AC003043.1-201ENST00000588260 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
AC003043.1-201ENST00000588260 SCAF1Q9H7N4 1312 aaKnown RBP20.29■□□□□ 0.84
AC003043.1-201ENST00000588260 ANKRD30BQ9BXX2 1392 aa20.27■□□□□ 0.84
AC003043.1-201ENST00000588260 IFT172Q9UG01 1749 aa20.27■□□□□ 0.83
AC003043.1-201ENST00000588260 PIP4K2BP78356 416 aa20.26■□□□□ 0.83
AC003043.1-201ENST00000588260 AMOTL2Q9Y2J4 779 aa20.25■□□□□ 0.83
AC003043.1-201ENST00000588260 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
AC003043.1-201ENST00000588260 RBM33Q96EV2 1170 aaKnown RBP20.24■□□□□ 0.83
AC003043.1-201ENST00000588260 METP08581 1390 aa20.23■□□□□ 0.83
AC003043.1-201ENST00000588260 ALKQ9UM73 1620 aa20.23■□□□□ 0.83
AC003043.1-201ENST00000588260 MSH6P52701 1360 aa20.22■□□□□ 0.83
AC003043.1-201ENST00000588260 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
AC003043.1-201ENST00000588260 PTPRUQ92729 1446 aa20.22■□□□□ 0.83
AC003043.1-201ENST00000588260 C14orf37Q86TY3 774 aa20.22■□□□□ 0.83
AC003043.1-201ENST00000588260 ADGRF5Q8IZF2 1346 aa20.21■□□□□ 0.83
AC003043.1-201ENST00000588260 NCOA3Q9Y6Q9 1424 aa20.2■□□□□ 0.82
AC003043.1-201ENST00000588260 SETD1AO15047 1707 aaKnown RBP20.2■□□□□ 0.82
AC003043.1-201ENST00000588260 MYOM2P54296 1465 aa20.17■□□□□ 0.82
AC003043.1-201ENST00000588260 PIK3C2GO75747 1445 aa20.15■□□□□ 0.82
AC003043.1-201ENST00000588260 C19orf44Q9H6X5 657 aa20.13■□□□□ 0.81
AC003043.1-201ENST00000588260 LAMC1P11047 1609 aa20.13■□□□□ 0.81
AC003043.1-201ENST00000588260 ATF3P18847 181 aa20.12■□□□□ 0.81
AC003043.1-201ENST00000588260 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.12■□□□□ 0.81
AC003043.1-201ENST00000588260 NRXN1Q9ULB1 1477 aa20.11■□□□□ 0.81
AC003043.1-201ENST00000588260 PTCH1Q13635 1447 aa20.11■□□□□ 0.81
AC003043.1-201ENST00000588260 HSPA1LP34931 641 aa20.11■□□□□ 0.81
AC003043.1-201ENST00000588260 CADPS2Q86UW7 1296 aa20.11■□□□□ 0.81
AC003043.1-201ENST00000588260 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
AC003043.1-201ENST00000588260 STAC3Q96MF2 364 aa20.1■□□□□ 0.81
AC003043.1-201ENST00000588260 SLAIN2Q9P270 581 aa20.09■□□□□ 0.81
AC003043.1-201ENST00000588260 KDM2AQ9Y2K7 1162 aa20.09■□□□□ 0.81
AC003043.1-201ENST00000588260 FAM135BQ49AJ0 1406 aa20.09■□□□□ 0.81
AC003043.1-201ENST00000588260 PRAG1Q86YV5 1406 aa20.09■□□□□ 0.81
AC003043.1-201ENST00000588260 ROBO1Q9Y6N7 1651 aa20.08■□□□□ 0.81
AC003043.1-201ENST00000588260 DCCP43146 1447 aa20.08■□□□□ 0.8
AC003043.1-201ENST00000588260 ROBO2Q9HCK4 1378 aa20.08■□□□□ 0.8
AC003043.1-201ENST00000588260 C14orf93Q9H972 538 aaKnown RBP20.07■□□□□ 0.8
AC003043.1-201ENST00000588260 STK26Q9P289 416 aa20.07■□□□□ 0.8
AC003043.1-201ENST00000588260 ADGRL3Q9HAR2 1447 aa20.07■□□□□ 0.8
AC003043.1-201ENST00000588260 LRPPRCP42704 1394 aaKnown RBP20.07■□□□□ 0.8
AC003043.1-201ENST00000588260 TMEM132EQ6IEE7 984 aa20.06■□□□□ 0.8
AC003043.1-201ENST00000588260 NALCNQ8IZF0 1738 aa20.06■□□□□ 0.8
AC003043.1-201ENST00000588260 ASXL1Q8IXJ9 1541 aa20.06■□□□□ 0.8
AC003043.1-201ENST00000588260 CFAP70Q5T0N1 1121 aa20.05■□□□□ 0.8
AC003043.1-201ENST00000588260 KNDC1Q76NI1 1749 aa20.05■□□□□ 0.8
AC003043.1-201ENST00000588260 YTHDC2Q9H6S0 1430 aaKnown RBP20.04■□□□□ 0.8
AC003043.1-201ENST00000588260 DHX57Q6P158 1386 aaKnown RBP20.04■□□□□ 0.8
AC003043.1-201ENST00000588260 TECPR2O15040 1411 aa20.03■□□□□ 0.8
AC003043.1-201ENST00000588260 ABCC11Q96J66 1382 aa20.03■□□□□ 0.8
AC003043.1-201ENST00000588260 NEUROD1Q13562 356 aa19.98■□□□□ 0.79
AC003043.1-201ENST00000588260 SIN3AQ96ST3 1273 aa19.98■□□□□ 0.79
AC003043.1-201ENST00000588260 MST1RQ04912 1400 aa19.98■□□□□ 0.79
AC003043.1-201ENST00000588260 PHLPP1O60346 1717 aa19.97■□□□□ 0.79
AC003043.1-201ENST00000588260 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
AC003043.1-201ENST00000588260 ADGRB1O14514 1584 aa19.95■□□□□ 0.78
AC003043.1-201ENST00000588260 CDC42BPGQ6DT37 1551 aa19.95■□□□□ 0.78
AC003043.1-201ENST00000588260 SIRT1Q96EB6 747 aa19.95■□□□□ 0.78
AC003043.1-201ENST00000588260 PLEKHH1Q9ULM0 1364 aa19.94■□□□□ 0.78
AC003043.1-201ENST00000588260 KIAA1210Q9ULL0 1709 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms