RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 NCKAP5LQ9HCH0 1330 aa20.75■□□□□ 0.91
CCDC43-203ENST00000588210 CCDC144AA2RUR9 1427 aa20.73■□□□□ 0.91
CCDC43-203ENST00000588210 TIMELESSQ9UNS1 1208 aa20.73■□□□□ 0.91
CCDC43-203ENST00000588210 EID1Q9Y6B2 187 aa20.73■□□□□ 0.91
CCDC43-203ENST00000588210 POLR1AO95602 1720 aaPredicted RBP20.72■□□□□ 0.91
CCDC43-203ENST00000588210 MYO5BQ9ULV0 1848 aa20.72■□□□□ 0.91
CCDC43-203ENST00000588210 TXNDC2Q86VQ3 553 aa20.71■□□□□ 0.91
CCDC43-203ENST00000588210 KIF1BO60333 1816 aa20.71■□□□□ 0.91
CCDC43-203ENST00000588210 HDGFP51858 240 aaKnown RBP20.71■□□□□ 0.91
CCDC43-203ENST00000588210 SCAF11Q99590 1463 aaKnown RBP20.7■□□□□ 0.9
CCDC43-203ENST00000588210 LTKP29376 864 aa20.69■□□□□ 0.9
CCDC43-203ENST00000588210 ANKRD30BQ9BXX2 1392 aa20.69■□□□□ 0.9
CCDC43-203ENST00000588210 MED14O60244 1454 aa20.69■□□□□ 0.9
CCDC43-203ENST00000588210 NEURL4Q96JN8 1562 aa20.69■□□□□ 0.9
CCDC43-203ENST00000588210 ZFYVE9O95405 1425 aa20.68■□□□□ 0.9
CCDC43-203ENST00000588210 RIMS2Q9UQ26 1411 aa20.67■□□□□ 0.9
CCDC43-203ENST00000588210 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.67■□□□□ 0.9
CCDC43-203ENST00000588210 NPHP4O75161 1426 aaPredicted RBP20.67■□□□□ 0.9
CCDC43-203ENST00000588210 ZNF326Q5BKZ1 582 aaKnown RBP20.66■□□□□ 0.9
CCDC43-203ENST00000588210 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
CCDC43-203ENST00000588210 IQGAP1P46940 1657 aa20.63■□□□□ 0.89
CCDC43-203ENST00000588210 PPP1R15AO75807 674 aaPredicted RBP20.62■□□□□ 0.89
CCDC43-203ENST00000588210 RPGRIP1LQ68CZ1 1315 aa20.62■□□□□ 0.89
CCDC43-203ENST00000588210 SPATA31E1Q6ZUB1 1445 aa20.61■□□□□ 0.89
CCDC43-203ENST00000588210 PLEKHG1Q9ULL1 1385 aa20.6■□□□□ 0.89
CCDC43-203ENST00000588210 NUTM2DQ5VT03 806 aaPredicted RBP20.59■□□□□ 0.89
CCDC43-203ENST00000588210 NEXMIFQ5QGS0 1516 aa20.59■□□□□ 0.89
CCDC43-203ENST00000588210 RGL3Q3MIN7 710 aa20.58■□□□□ 0.88
CCDC43-203ENST00000588210 VGFO15240 615 aaPredicted RBP20.57■□□□□ 0.88
CCDC43-203ENST00000588210 BCANQ96GW7 911 aa20.56■□□□□ 0.88
CCDC43-203ENST00000588210 PPLO60437 1756 aa20.54■□□□□ 0.88
CCDC43-203ENST00000588210 SUPT16HQ9Y5B9 1047 aaKnown RBP20.52■□□□□ 0.88
CCDC43-203ENST00000588210 SLC26A8Q96RN1 970 aa20.52■□□□□ 0.87
CCDC43-203ENST00000588210 ZNF335Q9H4Z2 1342 aaPredicted RBP20.51■□□□□ 0.87
CCDC43-203ENST00000588210 TBX22Q9Y458 520 aa20.5■□□□□ 0.87
CCDC43-203ENST00000588210 SENP3Q9H4L4 574 aaPredicted RBP20.5■□□□□ 0.87
CCDC43-203ENST00000588210 IFT172Q9UG01 1749 aa20.5■□□□□ 0.87
CCDC43-203ENST00000588210 TONSLQ96HA7 1378 aa20.49■□□□□ 0.87
CCDC43-203ENST00000588210 SETBP1Q9Y6X0 1596 aa20.49■□□□□ 0.87
CCDC43-203ENST00000588210 ADAMTS13Q76LX8 1427 aa20.49■□□□□ 0.87
CCDC43-203ENST00000588210 DIP2AQ14689 1571 aa20.48■□□□□ 0.87
CCDC43-203ENST00000588210 LTBP4Q8N2S1 1624 aa20.48■□□□□ 0.87
CCDC43-203ENST00000588210 DDX10Q13206 875 aaKnown RBP20.47■□□□□ 0.87
CCDC43-203ENST00000588210 STAC3Q96MF2 364 aa20.47■□□□□ 0.87
CCDC43-203ENST00000588210 NRXN3Q9Y4C0 1643 aa20.46■□□□□ 0.87
CCDC43-203ENST00000588210 ADGRF5Q8IZF2 1346 aa20.46■□□□□ 0.87
CCDC43-203ENST00000588210 MYOM2P54296 1465 aa20.45■□□□□ 0.86
CCDC43-203ENST00000588210 PIK3R4Q99570 1358 aa20.44■□□□□ 0.86
CCDC43-203ENST00000588210 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
CCDC43-203ENST00000588210 CPS1P31327 1500 aa20.43■□□□□ 0.86
CCDC43-203ENST00000588210 KCNA6P17658 529 aa20.43■□□□□ 0.86
CCDC43-203ENST00000588210 PIK3C2GO75747 1445 aa20.41■□□□□ 0.86
CCDC43-203ENST00000588210 NRXN1Q9ULB1 1477 aa20.41■□□□□ 0.86
CCDC43-203ENST00000588210 CERKQ8TCT0 537 aa20.41■□□□□ 0.86
CCDC43-203ENST00000588210 STRCP1A6NGW2 1772 aa20.4■□□□□ 0.86
CCDC43-203ENST00000588210 CCER2I3L3R5 266 aa20.4■□□□□ 0.86
CCDC43-203ENST00000588210 ALKQ9UM73 1620 aa20.4■□□□□ 0.86
CCDC43-203ENST00000588210 CHD2O14647 1828 aaKnown RBP20.4■□□□□ 0.86
CCDC43-203ENST00000588210 KDM2AQ9Y2K7 1162 aa20.39■□□□□ 0.86
CCDC43-203ENST00000588210 NWD1Q149M9 1564 aa20.38■□□□□ 0.85
CCDC43-203ENST00000588210 METP08581 1390 aa20.38■□□□□ 0.85
CCDC43-203ENST00000588210 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
CCDC43-203ENST00000588210 MYT1Q01538 1121 aa20.36■□□□□ 0.85
CCDC43-203ENST00000588210 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
CCDC43-203ENST00000588210 NKTRP30414 1462 aaKnown RBP20.35■□□□□ 0.85
CCDC43-203ENST00000588210 IQSEC2Q5JU85 1478 aa20.35■□□□□ 0.85
CCDC43-203ENST00000588210 C14orf93Q9H972 538 aaKnown RBP20.35■□□□□ 0.85
CCDC43-203ENST00000588210 AMOTL2Q9Y2J4 779 aa20.35■□□□□ 0.85
CCDC43-203ENST00000588210 PTPRUQ92729 1446 aa20.35■□□□□ 0.85
CCDC43-203ENST00000588210 LRRC7Q96NW7 1537 aa20.34■□□□□ 0.85
CCDC43-203ENST00000588210 LAMC1P11047 1609 aa20.33■□□□□ 0.85
CCDC43-203ENST00000588210 ANP32CO43423 234 aa20.33■□□□□ 0.84
CCDC43-203ENST00000588210 CFAP70Q5T0N1 1121 aa20.32■□□□□ 0.84
CCDC43-203ENST00000588210 HIRIP3Q9BW71 556 aaPredicted RBP20.32■□□□□ 0.84
CCDC43-203ENST00000588210 PROSER2Q86WR7 435 aaPredicted RBP20.31■□□□□ 0.84
CCDC43-203ENST00000588210 XRN1Q8IZH2 1706 aaKnown RBP20.31■□□□□ 0.84
CCDC43-203ENST00000588210 TMEM94Q12767 1356 aa20.28■□□□□ 0.84
CCDC43-203ENST00000588210 PRAG1Q86YV5 1406 aa20.28■□□□□ 0.84
CCDC43-203ENST00000588210 TMEM132EQ6IEE7 984 aa20.28■□□□□ 0.84
CCDC43-203ENST00000588210 ASXL1Q8IXJ9 1541 aa20.27■□□□□ 0.83
CCDC43-203ENST00000588210 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
CCDC43-203ENST00000588210 LRPPRCP42704 1394 aaKnown RBP20.26■□□□□ 0.83
CCDC43-203ENST00000588210 XIRP1Q702N8 1843 aaKnown RBP20.25■□□□□ 0.83
CCDC43-203ENST00000588210 PTCH1Q13635 1447 aa20.25■□□□□ 0.83
CCDC43-203ENST00000588210 ABCC11Q96J66 1382 aa20.24■□□□□ 0.83
CCDC43-203ENST00000588210 YTHDC2Q9H6S0 1430 aaKnown RBP20.24■□□□□ 0.83
CCDC43-203ENST00000588210 RBM33Q96EV2 1170 aaKnown RBP20.24■□□□□ 0.83
CCDC43-203ENST00000588210 KIAA1210Q9ULL0 1709 aa20.24■□□□□ 0.83
CCDC43-203ENST00000588210 TECPR2O15040 1411 aa20.23■□□□□ 0.83
CCDC43-203ENST00000588210 ADGRB1O14514 1584 aa20.23■□□□□ 0.83
CCDC43-203ENST00000588210 STK26Q9P289 416 aa20.23■□□□□ 0.83
CCDC43-203ENST00000588210 ROBO2Q9HCK4 1378 aa20.22■□□□□ 0.83
CCDC43-203ENST00000588210 KNDC1Q76NI1 1749 aa20.21■□□□□ 0.83
CCDC43-203ENST00000588210 FBXO41Q8TF61 875 aa20.2■□□□□ 0.82
CCDC43-203ENST00000588210 SIRT1Q96EB6 747 aa20.2■□□□□ 0.82
CCDC43-203ENST00000588210 MSH6P52701 1360 aa20.19■□□□□ 0.82
CCDC43-203ENST00000588210 TOM1O60784 492 aa20.19■□□□□ 0.82
CCDC43-203ENST00000588210 C14orf37Q86TY3 774 aa20.19■□□□□ 0.82
CCDC43-203ENST00000588210 C19orf44Q9H6X5 657 aa20.18■□□□□ 0.82
CCDC43-203ENST00000588210 UBAP1LF5GYI3 381 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms