RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SPHKAPQ2M3C7 1700 aa14.98□□□□□ -0.01
TPM4-207ENST00000588032 IQGAP1P46940 1657 aa14.98□□□□□ -0.01
TPM4-207ENST00000588032 FBXO41Q8TF61 875 aa14.98□□□□□ -0.01
TPM4-207ENST00000588032 LTBP4Q8N2S1 1624 aa14.98□□□□□ -0.01
TPM4-207ENST00000588032 PPP1R15AO75807 674 aaPredicted RBP14.97□□□□□ -0.01
TPM4-207ENST00000588032 RIMS2Q9UQ26 1411 aa14.97□□□□□ -0.01
TPM4-207ENST00000588032 TRPM2O94759 1503 aa14.97□□□□□ -0.01
TPM4-207ENST00000588032 ZFYVE9O95405 1425 aa14.96□□□□□ -0.01
TPM4-207ENST00000588032 IQSEC2Q5JU85 1478 aa14.95□□□□□ -0.02
TPM4-207ENST00000588032 ZNF326Q5BKZ1 582 aaKnown RBP14.94□□□□□ -0.02
TPM4-207ENST00000588032 ILDR1Q86SU0 546 aaPredicted RBP14.94□□□□□ -0.02
TPM4-207ENST00000588032 BCANQ96GW7 911 aa14.94□□□□□ -0.02
TPM4-207ENST00000588032 PLEKHG1Q9ULL1 1385 aa14.94□□□□□ -0.02
TPM4-207ENST00000588032 CPS1P31327 1500 aa14.93□□□□□ -0.02
TPM4-207ENST00000588032 RPGRIP1LQ68CZ1 1315 aa14.92□□□□□ -0.02
TPM4-207ENST00000588032 SLC26A8Q96RN1 970 aa14.91□□□□□ -0.02
TPM4-207ENST00000588032 TBX22Q9Y458 520 aa14.91□□□□□ -0.02
TPM4-207ENST00000588032 CLTCL1P53675 1640 aa14.91□□□□□ -0.02
TPM4-207ENST00000588032 CCDC144AA2RUR9 1427 aa14.91□□□□□ -0.02
TPM4-207ENST00000588032 MYO5BQ9ULV0 1848 aa14.89□□□□□ -0.03
TPM4-207ENST00000588032 VGFO15240 615 aaPredicted RBP14.89□□□□□ -0.03
TPM4-207ENST00000588032 KCNA6P17658 529 aa14.89□□□□□ -0.03
TPM4-207ENST00000588032 NUTM2DQ5VT03 806 aaPredicted RBP14.88□□□□□ -0.03
TPM4-207ENST00000588032 KIF1BO60333 1816 aa14.87□□□□□ -0.03
TPM4-207ENST00000588032 ADRA2BP18089 450 aa14.87□□□□□ -0.03
TPM4-207ENST00000588032 PIK3R4Q99570 1358 aa14.85□□□□□ -0.03
TPM4-207ENST00000588032 TRIM26Q12899 539 aaPredicted RBP14.85□□□□□ -0.03
TPM4-207ENST00000588032 ADAMTS13Q76LX8 1427 aa14.83□□□□□ -0.03
TPM4-207ENST00000588032 NEXMIFQ5QGS0 1516 aa14.83□□□□□ -0.04
TPM4-207ENST00000588032 LRRC7Q96NW7 1537 aa14.83□□□□□ -0.04
TPM4-207ENST00000588032 DIP2AQ14689 1571 aa14.83□□□□□ -0.04
TPM4-207ENST00000588032 TOM1O60784 492 aa14.83□□□□□ -0.04
TPM4-207ENST00000588032 ANKRD30BQ9BXX2 1392 aa14.83□□□□□ -0.04
TPM4-207ENST00000588032 SPATA31E1Q6ZUB1 1445 aa14.83□□□□□ -0.04
TPM4-207ENST00000588032 UBAP1LF5GYI3 381 aa14.82□□□□□ -0.04
TPM4-207ENST00000588032 RGL3Q3MIN7 710 aa14.82□□□□□ -0.04
TPM4-207ENST00000588032 PROSER2Q86WR7 435 aaPredicted RBP14.82□□□□□ -0.04
TPM4-207ENST00000588032 SETBP1Q9Y6X0 1596 aa14.81□□□□□ -0.04
TPM4-207ENST00000588032 STRCP1A6NGW2 1772 aa14.8□□□□□ -0.04
TPM4-207ENST00000588032 NKTRP30414 1462 aaKnown RBP14.8□□□□□ -0.04
TPM4-207ENST00000588032 NWD1Q149M9 1564 aa14.78□□□□□ -0.04
TPM4-207ENST00000588032 STAC3Q96MF2 364 aa14.78□□□□□ -0.04
TPM4-207ENST00000588032 AMOTL2Q9Y2J4 779 aa14.78□□□□□ -0.04
TPM4-207ENST00000588032 NCOA3Q9Y6Q9 1424 aa14.77□□□□□ -0.04
TPM4-207ENST00000588032 TMEM94Q12767 1356 aa14.77□□□□□ -0.04
TPM4-207ENST00000588032 CHD2O14647 1828 aaKnown RBP14.76□□□□□ -0.05
TPM4-207ENST00000588032 NRXN3Q9Y4C0 1643 aa14.75□□□□□ -0.05
TPM4-207ENST00000588032 PPLO60437 1756 aa14.75□□□□□ -0.05
TPM4-207ENST00000588032 METP08581 1390 aa14.74□□□□□ -0.05
TPM4-207ENST00000588032 ADGRF5Q8IZF2 1346 aa14.74□□□□□ -0.05
TPM4-207ENST00000588032 PTPRUQ92729 1446 aa14.73□□□□□ -0.05
TPM4-207ENST00000588032 MSH6P52701 1360 aa14.73□□□□□ -0.05
TPM4-207ENST00000588032 ALKQ9UM73 1620 aa14.72□□□□□ -0.05
TPM4-207ENST00000588032 PIP4K2BP78356 416 aa14.71□□□□□ -0.05
TPM4-207ENST00000588032 C14orf37Q86TY3 774 aa14.71□□□□□ -0.05
TPM4-207ENST00000588032 RBM33Q96EV2 1170 aaKnown RBP14.71□□□□□ -0.05
TPM4-207ENST00000588032 C19orf44Q9H6X5 657 aa14.71□□□□□ -0.05
TPM4-207ENST00000588032 SCAF1Q9H7N4 1312 aaKnown RBP14.7□□□□□ -0.06
TPM4-207ENST00000588032 MYOM2P54296 1465 aa14.69□□□□□ -0.06
TPM4-207ENST00000588032 PIK3C2GO75747 1445 aa14.69□□□□□ -0.06
TPM4-207ENST00000588032 DCAF11Q8TEB1 546 aa14.69□□□□□ -0.06
TPM4-207ENST00000588032 C14orf93Q9H972 538 aaKnown RBP14.69□□□□□ -0.06
TPM4-207ENST00000588032 IFT172Q9UG01 1749 aa14.69□□□□□ -0.06
TPM4-207ENST00000588032 XIRP1Q702N8 1843 aaKnown RBP14.69□□□□□ -0.06
TPM4-207ENST00000588032 CADPS2Q86UW7 1296 aa14.68□□□□□ -0.06
TPM4-207ENST00000588032 NRXN1Q9ULB1 1477 aa14.68□□□□□ -0.06
TPM4-207ENST00000588032 PRAG1Q86YV5 1406 aa14.67□□□□□ -0.06
TPM4-207ENST00000588032 XRN1Q8IZH2 1706 aaKnown RBP14.67□□□□□ -0.06
TPM4-207ENST00000588032 ATF3P18847 181 aa14.66□□□□□ -0.06
TPM4-207ENST00000588032 SLAIN2Q9P270 581 aa14.66□□□□□ -0.06
TPM4-207ENST00000588032 KDM2AQ9Y2K7 1162 aa14.66□□□□□ -0.06
TPM4-207ENST00000588032 PTCH1Q13635 1447 aa14.66□□□□□ -0.06
TPM4-207ENST00000588032 FAM135BQ49AJ0 1406 aa14.66□□□□□ -0.06
TPM4-207ENST00000588032 DHX57Q6P158 1386 aaKnown RBP14.65□□□□□ -0.06
TPM4-207ENST00000588032 ABCC11Q96J66 1382 aa14.65□□□□□ -0.06
TPM4-207ENST00000588032 SETD1AO15047 1707 aaKnown RBP14.65□□□□□ -0.06
TPM4-207ENST00000588032 LRPPRCP42704 1394 aaKnown RBP14.64□□□□□ -0.07
TPM4-207ENST00000588032 CFAP70Q5T0N1 1121 aa14.64□□□□□ -0.07
TPM4-207ENST00000588032 SIRT1Q96EB6 747 aa14.64□□□□□ -0.07
TPM4-207ENST00000588032 DCCP43146 1447 aa14.64□□□□□ -0.07
TPM4-207ENST00000588032 TMEM132EQ6IEE7 984 aa14.63□□□□□ -0.07
TPM4-207ENST00000588032 ROBO2Q9HCK4 1378 aa14.62□□□□□ -0.07
TPM4-207ENST00000588032 TECPR2O15040 1411 aa14.62□□□□□ -0.07
TPM4-207ENST00000588032 HSPA1LP34931 641 aa14.62□□□□□ -0.07
TPM4-207ENST00000588032 ADGRL3Q9HAR2 1447 aa14.61□□□□□ -0.07
TPM4-207ENST00000588032 STK26Q9P289 416 aa14.61□□□□□ -0.07
TPM4-207ENST00000588032 LAMC1P11047 1609 aa14.61□□□□□ -0.07
TPM4-207ENST00000588032 YTHDC2Q9H6S0 1430 aaKnown RBP14.6□□□□□ -0.07
TPM4-207ENST00000588032 SIN3AQ96ST3 1273 aa14.6□□□□□ -0.07
TPM4-207ENST00000588032 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.59□□□□□ -0.07
TPM4-207ENST00000588032 NEUROD1Q13562 356 aa14.59□□□□□ -0.07
TPM4-207ENST00000588032 ASXL1Q8IXJ9 1541 aa14.57□□□□□ -0.08
TPM4-207ENST00000588032 L3MBTL2Q969R5 705 aa14.57□□□□□ -0.08
TPM4-207ENST00000588032 WAPLQ7Z5K2 1190 aa14.56□□□□□ -0.08
TPM4-207ENST00000588032 PCGF6Q9BYE7 350 aa14.56□□□□□ -0.08
TPM4-207ENST00000588032 MST1RQ04912 1400 aa14.54□□□□□ -0.08
TPM4-207ENST00000588032 ADGRB1O14514 1584 aa14.54□□□□□ -0.08
TPM4-207ENST00000588032 ROBO1Q9Y6N7 1651 aa14.54□□□□□ -0.08
TPM4-207ENST00000588032 KNDC1Q76NI1 1749 aa14.54□□□□□ -0.08
TPM4-207ENST00000588032 DLC1Q96QB1 1528 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms