RNA–Protein interactions for RNA: ENST00000587605.5

MBD1-216, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 2 BASIC

Gene MBD1, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-216ENST00000587605 ERICH6Q7L0X2 663 aa26.37■■□□□ 1.81
MBD1-216ENST00000587605 EFCAB6Q5THR3 1501 aa26.36■■□□□ 1.81
MBD1-216ENST00000587605 LMTK2Q8IWU2 1503 aa26.36■■□□□ 1.81
MBD1-216ENST00000587605 MAP3K4Q9Y6R4 1608 aa26.36■■□□□ 1.81
MBD1-216ENST00000587605 KIF1BO60333 1816 aa26.36■■□□□ 1.81
MBD1-216ENST00000587605 ASXL1Q8IXJ9 1541 aa26.35■■□□□ 1.81
MBD1-216ENST00000587605 KDM5AP29375 1690 aaKnown RBP26.35■■□□□ 1.81
MBD1-216ENST00000587605 MYOM1P52179 1685 aa26.33■■□□□ 1.81
MBD1-216ENST00000587605 ASXL2Q76L83 1435 aa26.32■■□□□ 1.8
MBD1-216ENST00000587605 IFT172Q9UG01 1749 aa26.32■■□□□ 1.8
MBD1-216ENST00000587605 KIF3BO15066 747 aa26.32■■□□□ 1.8
MBD1-216ENST00000587605 CFAP74Q9C0B2 1584 aa26.32■■□□□ 1.8
MBD1-216ENST00000587605 PIK3C2GO75747 1445 aa26.32■■□□□ 1.8
MBD1-216ENST00000587605 KIDINS220Q9ULH0 1771 aa26.3■■□□□ 1.8
MBD1-216ENST00000587605 ZNF518AQ6AHZ1 1483 aa26.3■■□□□ 1.8
MBD1-216ENST00000587605 AMER1Q5JTC6 1135 aaPredicted RBP26.29■■□□□ 1.8
MBD1-216ENST00000587605 ABCA6Q8N139 1617 aa26.29■■□□□ 1.8
MBD1-216ENST00000587605 SENP3-EIF4A1A0A087X0R7 540 aa26.28■■□□□ 1.8
MBD1-216ENST00000587605 PPP2R1AP30153 589 aa26.27■■□□□ 1.8
MBD1-216ENST00000587605 NRXN1Q9ULB1 1477 aa26.26■■□□□ 1.79
MBD1-216ENST00000587605 MYO3AQ8NEV4 1616 aa26.26■■□□□ 1.79
MBD1-216ENST00000587605 PPRC1Q5VV67 1664 aaKnown RBP26.25■■□□□ 1.79
MBD1-216ENST00000587605 MYT1LQ9UL68 1186 aa26.25■■□□□ 1.79
MBD1-216ENST00000587605 WDR43Q15061 677 aaKnown RBP eCLIP26.24■■□□□ 1.79
MBD1-216ENST00000587605 SALL2Q9Y467 1007 aaPredicted RBP26.24■■□□□ 1.79
MBD1-216ENST00000587605 EXOC6Q8TAG9 804 aa26.23■■□□□ 1.79
MBD1-216ENST00000587605 SBNO2Q9Y2G9 1366 aa26.23■■□□□ 1.79
MBD1-216ENST00000587605 SETBP1Q9Y6X0 1596 aa26.22■■□□□ 1.79
MBD1-216ENST00000587605 CDCA7LQ96GN5 454 aa26.22■■□□□ 1.79
MBD1-216ENST00000587605 ADGRB3O60242 1522 aa26.21■■□□□ 1.79
MBD1-216ENST00000587605 ADAMTS8Q9UP79 889 aa26.2■■□□□ 1.79
MBD1-216ENST00000587605 TCERG1O14776 1098 aaKnown RBP26.2■■□□□ 1.78
MBD1-216ENST00000587605 MROH2AA6NES4 1674 aa26.19■■□□□ 1.78
MBD1-216ENST00000587605 ERVK-7P63135 1459 aa26.19■■□□□ 1.78
MBD1-216ENST00000587605 UGGT1Q9NYU2 1555 aa26.18■■□□□ 1.78
MBD1-216ENST00000587605 MLH3Q9UHC1 1453 aa26.17■■□□□ 1.78
MBD1-216ENST00000587605 ANP32AP39687 249 aaKnown RBP26.16■■□□□ 1.78
MBD1-216ENST00000587605 POGZQ7Z3K3 1410 aa26.16■■□□□ 1.78
MBD1-216ENST00000587605 NPM1P06748 294 aaKnown RBP eCLIP26.14■■□□□ 1.78
MBD1-216ENST00000587605 MS4A1P11836 297 aa26.14■■□□□ 1.78
MBD1-216ENST00000587605 CFAP70Q5T0N1 1121 aa26.14■■□□□ 1.77
MBD1-216ENST00000587605 ADGRF5Q8IZF2 1346 aa26.13■■□□□ 1.77
MBD1-216ENST00000587605 ZNF521Q96K83 1311 aa26.13■■□□□ 1.77
MBD1-216ENST00000587605 NGEFQ8N5V2 710 aa26.13■■□□□ 1.77
MBD1-216ENST00000587605 HECW2Q9P2P5 1572 aa26.13■■□□□ 1.77
MBD1-216ENST00000587605 NOP58Q9Y2X3 529 aaKnown RBP26.12■■□□□ 1.77
MBD1-216ENST00000587605 PPLO60437 1756 aa26.11■■□□□ 1.77
MBD1-216ENST00000587605 PLEKHH1Q9ULM0 1364 aa26.09■■□□□ 1.77
MBD1-216ENST00000587605 CD109Q6YHK3 1445 aa26.09■■□□□ 1.77
MBD1-216ENST00000587605 RPGRIP1LQ68CZ1 1315 aa26.09■■□□□ 1.77
MBD1-216ENST00000587605 FRMPD1Q5SYB0 1578 aa26.09■■□□□ 1.77
MBD1-216ENST00000587605 GOLGA2Q08379 1002 aa26.08■■□□□ 1.77
MBD1-216ENST00000587605 ZC3H13Q5T200 1668 aaKnown RBP26.07■■□□□ 1.76
MBD1-216ENST00000587605 NOS1P29475 1434 aa26.06■■□□□ 1.76
MBD1-216ENST00000587605 DUSP27Q5VZP5 1158 aa26.06■■□□□ 1.76
MBD1-216ENST00000587605 IPO9Q96P70 1041 aaKnown RBP26.06■■□□□ 1.76
MBD1-216ENST00000587605 NPATQ14207 1427 aa26.06■■□□□ 1.76
MBD1-216ENST00000587605 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.06■■□□□ 1.76
MBD1-216ENST00000587605 CENPJQ9HC77 1338 aaPredicted RBP26.04■■□□□ 1.76
MBD1-216ENST00000587605 CRBNQ96SW2 442 aa26.03■■□□□ 1.76
MBD1-216ENST00000587605 ABCC3O15438 1527 aa26.03■■□□□ 1.76
MBD1-216ENST00000587605 NEO1Q92859 1461 aa26.02■■□□□ 1.76
MBD1-216ENST00000587605 SLFN5Q08AF3 891 aa26.01■■□□□ 1.75
MBD1-216ENST00000587605 QRICH2Q9H0J4 1663 aa26.01■■□□□ 1.75
MBD1-216ENST00000587605 C14orf93Q9H972 538 aaKnown RBP26.01■■□□□ 1.75
MBD1-216ENST00000587605 USP32Q8NFA0 1604 aa26■■□□□ 1.75
MBD1-216ENST00000587605 ADGRB1O14514 1584 aa26■■□□□ 1.75
MBD1-216ENST00000587605 POLR3AO14802 1390 aaPredicted RBP26■■□□□ 1.75
MBD1-216ENST00000587605 PLIN1O60240 522 aa26■■□□□ 1.75
MBD1-216ENST00000587605 TRMT2AQ8IZ69 625 aaKnown RBP26■■□□□ 1.75
MBD1-216ENST00000587605 CAMSAP1Q5T5Y3 1602 aa25.99■■□□□ 1.75
MBD1-216ENST00000587605 OSCARQ8IYS5 282 aa25.97■■□□□ 1.75
MBD1-216ENST00000587605 PUS7Q96PZ0 661 aaKnown RBP25.97■■□□□ 1.75
MBD1-216ENST00000587605 CARD14Q9BXL6 1004 aa25.97■■□□□ 1.75
MBD1-216ENST00000587605 NKTRP30414 1462 aaKnown RBP25.96■■□□□ 1.75
MBD1-216ENST00000587605 PIK3C2BO00750 1634 aa25.96■■□□□ 1.75
MBD1-216ENST00000587605 PDE4AP27815 886 aa25.96■■□□□ 1.75
MBD1-216ENST00000587605 BACH2Q9BYV9 841 aa25.95■■□□□ 1.74
MBD1-216ENST00000587605 ZBTB47Q9UFB7 747 aaPredicted RBP25.94■■□□□ 1.74
MBD1-216ENST00000587605 E9PSI1 815 aa25.94■■□□□ 1.74
MBD1-216ENST00000587605 CHGAP10645 457 aaKnown RBP25.92■■□□□ 1.74
MBD1-216ENST00000587605 CENPQQ7L2Z9 268 aaPredicted RBP25.92■■□□□ 1.74
MBD1-216ENST00000587605 ARHGAP31Q2M1Z3 1444 aa25.92■■□□□ 1.74
MBD1-216ENST00000587605 NSD3Q9BZ95 1437 aa25.9■■□□□ 1.74
MBD1-216ENST00000587605 KDM2BQ8NHM5 1336 aa25.9■■□□□ 1.74
MBD1-216ENST00000587605 GGT6Q6P531 493 aa25.9■■□□□ 1.74
MBD1-216ENST00000587605 APAF1O14727 1248 aa25.89■■□□□ 1.74
MBD1-216ENST00000587605 GLI2P10070 1586 aa25.88■■□□□ 1.73
MBD1-216ENST00000587605 DIP2CQ9Y2E4 1556 aa25.88■■□□□ 1.73
MBD1-216ENST00000587605 NINLQ9Y2I6 1382 aa25.87■■□□□ 1.73
MBD1-216ENST00000587605 PAK3O75914 559 aaPredicted RBP25.87■■□□□ 1.73
MBD1-216ENST00000587605 C20orf194Q5TEA3 1177 aa25.87■■□□□ 1.73
MBD1-216ENST00000587605 CCDC146Q8IYE0 955 aa25.87■■□□□ 1.73
MBD1-216ENST00000587605 CFAP65Q6ZU64 1925 aaKnown RBP25.87■■□□□ 1.73
MBD1-216ENST00000587605 NEXMIFQ5QGS0 1516 aa25.86■■□□□ 1.73
MBD1-216ENST00000587605 SHPRHQ149N8 1683 aa25.86■■□□□ 1.73
MBD1-216ENST00000587605 SIGLEC1Q9BZZ2 1709 aa25.86■■□□□ 1.73
MBD1-216ENST00000587605 VGFO15240 615 aaPredicted RBP25.86■■□□□ 1.73
MBD1-216ENST00000587605 TRAK1Q9UPV9 953 aa25.86■■□□□ 1.73
MBD1-216ENST00000587605 NSD2O96028 1365 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms