RNA–Protein interactions for RNA: ENST00000587072.1

GCDH-205, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 453 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-205ENST00000587072 ZFYVE9O95405 1425 aa23.98■■□□□ 1.43
GCDH-205ENST00000587072 ZNF326Q5BKZ1 582 aaKnown RBP23.96■■□□□ 1.43
GCDH-205ENST00000587072 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.96■■□□□ 1.43
GCDH-205ENST00000587072 NPHP4O75161 1426 aaPredicted RBP23.95■■□□□ 1.42
GCDH-205ENST00000587072 LTKP29376 864 aa23.95■■□□□ 1.42
GCDH-205ENST00000587072 IQGAP1P46940 1657 aa23.95■■□□□ 1.42
GCDH-205ENST00000587072 DHX57Q6P158 1386 aaKnown RBP23.94■■□□□ 1.42
GCDH-205ENST00000587072 PPP1R15AO75807 674 aaPredicted RBP23.94■■□□□ 1.42
GCDH-205ENST00000587072 SPATA31E1Q6ZUB1 1445 aa23.92■■□□□ 1.42
GCDH-205ENST00000587072 NEXMIFQ5QGS0 1516 aa23.9■■□□□ 1.42
GCDH-205ENST00000587072 RPGRIP1LQ68CZ1 1315 aa23.9■■□□□ 1.42
GCDH-205ENST00000587072 PLEKHG1Q9ULL1 1385 aa23.89■■□□□ 1.41
GCDH-205ENST00000587072 PPLO60437 1756 aa23.86■■□□□ 1.41
GCDH-205ENST00000587072 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
GCDH-205ENST00000587072 NUTM2DQ5VT03 806 aaPredicted RBP23.84■■□□□ 1.41
GCDH-205ENST00000587072 BCANQ96GW7 911 aa23.84■■□□□ 1.41
GCDH-205ENST00000587072 IFT172Q9UG01 1749 aa23.82■■□□□ 1.4
GCDH-205ENST00000587072 VGFO15240 615 aaPredicted RBP23.82■■□□□ 1.4
GCDH-205ENST00000587072 DIP2AQ14689 1571 aa23.8■■□□□ 1.4
GCDH-205ENST00000587072 SETBP1Q9Y6X0 1596 aa23.79■■□□□ 1.4
GCDH-205ENST00000587072 SLC26A8Q96RN1 970 aa23.76■■□□□ 1.39
GCDH-205ENST00000587072 ADAMTS13Q76LX8 1427 aa23.76■■□□□ 1.39
GCDH-205ENST00000587072 MYOM2P54296 1465 aa23.75■■□□□ 1.39
GCDH-205ENST00000587072 NRXN3Q9Y4C0 1643 aa23.75■■□□□ 1.39
GCDH-205ENST00000587072 ZNF335Q9H4Z2 1342 aaPredicted RBP23.75■■□□□ 1.39
GCDH-205ENST00000587072 TBX22Q9Y458 520 aa23.74■■□□□ 1.39
GCDH-205ENST00000587072 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
GCDH-205ENST00000587072 SENP3Q9H4L4 574 aaPredicted RBP23.73■■□□□ 1.39
GCDH-205ENST00000587072 LTBP4Q8N2S1 1624 aa23.71■■□□□ 1.39
GCDH-205ENST00000587072 SIN3AQ96ST3 1273 aa23.71■■□□□ 1.39
GCDH-205ENST00000587072 CPS1P31327 1500 aa23.7■■□□□ 1.38
GCDH-205ENST00000587072 PIK3R4Q99570 1358 aa23.7■■□□□ 1.38
GCDH-205ENST00000587072 ADGRF5Q8IZF2 1346 aa23.7■■□□□ 1.38
GCDH-205ENST00000587072 NRXN1Q9ULB1 1477 aa23.69■■□□□ 1.38
GCDH-205ENST00000587072 PIK3C2GO75747 1445 aa23.69■■□□□ 1.38
GCDH-205ENST00000587072 CLSPNQ9HAW4 1339 aa23.69■■□□□ 1.38
GCDH-205ENST00000587072 NEUROD1Q13562 356 aa23.69■■□□□ 1.38
GCDH-205ENST00000587072 DCAF11Q8TEB1 546 aa23.69■■□□□ 1.38
GCDH-205ENST00000587072 NWD1Q149M9 1564 aa23.67■■□□□ 1.38
GCDH-205ENST00000587072 ALKQ9UM73 1620 aa23.66■■□□□ 1.38
GCDH-205ENST00000587072 CHD2O14647 1828 aaKnown RBP23.66■■□□□ 1.38
GCDH-205ENST00000587072 SETD1AO15047 1707 aaKnown RBP23.65■■□□□ 1.38
GCDH-205ENST00000587072 KCNA6P17658 529 aa23.65■■□□□ 1.38
GCDH-205ENST00000587072 LAMC1P11047 1609 aa23.65■■□□□ 1.38
GCDH-205ENST00000587072 STRCP1A6NGW2 1772 aa23.65■■□□□ 1.38
GCDH-205ENST00000587072 KDM2AQ9Y2K7 1162 aa23.64■■□□□ 1.37
GCDH-205ENST00000587072 NKTRP30414 1462 aaKnown RBP23.63■■□□□ 1.37
GCDH-205ENST00000587072 CCER1Q8TC90 406 aaPredicted RBP23.63■■□□□ 1.37
GCDH-205ENST00000587072 METP08581 1390 aa23.61■■□□□ 1.37
GCDH-205ENST00000587072 TONSLQ96HA7 1378 aa23.61■■□□□ 1.37
GCDH-205ENST00000587072 L3MBTL2Q969R5 705 aa23.6■■□□□ 1.37
GCDH-205ENST00000587072 IQSEC2Q5JU85 1478 aa23.6■■□□□ 1.37
GCDH-205ENST00000587072 CERKQ8TCT0 537 aa23.59■■□□□ 1.37
GCDH-205ENST00000587072 XRN1Q8IZH2 1706 aaKnown RBP23.58■■□□□ 1.37
GCDH-205ENST00000587072 PTPRUQ92729 1446 aa23.58■■□□□ 1.36
GCDH-205ENST00000587072 C14orf93Q9H972 538 aaKnown RBP23.57■■□□□ 1.36
GCDH-205ENST00000587072 LRRC7Q96NW7 1537 aa23.57■■□□□ 1.36
GCDH-205ENST00000587072 AMOTL2Q9Y2J4 779 aa23.56■■□□□ 1.36
GCDH-205ENST00000587072 PRAG1Q86YV5 1406 aa23.55■■□□□ 1.36
GCDH-205ENST00000587072 ASXL1Q8IXJ9 1541 aa23.54■■□□□ 1.36
GCDH-205ENST00000587072 CFAP70Q5T0N1 1121 aa23.54■■□□□ 1.36
GCDH-205ENST00000587072 ILDR1Q86SU0 546 aaPredicted RBP23.54■■□□□ 1.36
GCDH-205ENST00000587072 PROSER2Q86WR7 435 aaPredicted RBP23.53■■□□□ 1.36
GCDH-205ENST00000587072 KIAA1210Q9ULL0 1709 aa23.53■■□□□ 1.36
GCDH-205ENST00000587072 PTCH1Q13635 1447 aa23.51■■□□□ 1.35
GCDH-205ENST00000587072 LRPPRCP42704 1394 aaKnown RBP23.51■■□□□ 1.35
GCDH-205ENST00000587072 TMEM94Q12767 1356 aa23.51■■□□□ 1.35
GCDH-205ENST00000587072 KNDC1Q76NI1 1749 aa23.49■■□□□ 1.35
GCDH-205ENST00000587072 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
GCDH-205ENST00000587072 TECPR2O15040 1411 aa23.49■■□□□ 1.35
GCDH-205ENST00000587072 YTHDC2Q9H6S0 1430 aaKnown RBP23.49■■□□□ 1.35
GCDH-205ENST00000587072 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
GCDH-205ENST00000587072 TMEM132EQ6IEE7 984 aa23.48■■□□□ 1.35
GCDH-205ENST00000587072 TIMELESSQ9UNS1 1208 aa23.48■■□□□ 1.35
GCDH-205ENST00000587072 NCOA3Q9Y6Q9 1424 aa23.48■■□□□ 1.35
GCDH-205ENST00000587072 ABCC11Q96J66 1382 aa23.47■■□□□ 1.35
GCDH-205ENST00000587072 FBXO41Q8TF61 875 aa23.46■■□□□ 1.35
GCDH-205ENST00000587072 STK26Q9P289 416 aa23.44■■□□□ 1.34
GCDH-205ENST00000587072 ROBO2Q9HCK4 1378 aa23.43■■□□□ 1.34
GCDH-205ENST00000587072 TRPM1Q7Z4N2 1603 aa23.43■■□□□ 1.34
GCDH-205ENST00000587072 MSH6P52701 1360 aa23.42■■□□□ 1.34
GCDH-205ENST00000587072 C14orf37Q86TY3 774 aa23.42■■□□□ 1.34
GCDH-205ENST00000587072 RBM33Q96EV2 1170 aaKnown RBP23.41■■□□□ 1.34
GCDH-205ENST00000587072 DLC1Q96QB1 1528 aa23.41■■□□□ 1.34
GCDH-205ENST00000587072 FAM135BQ49AJ0 1406 aa23.4■■□□□ 1.34
GCDH-205ENST00000587072 SIRT1Q96EB6 747 aa23.38■■□□□ 1.33
GCDH-205ENST00000587072 ADGRL3Q9HAR2 1447 aa23.38■■□□□ 1.33
GCDH-205ENST00000587072 TOM1O60784 492 aa23.37■■□□□ 1.33
GCDH-205ENST00000587072 C19orf44Q9H6X5 657 aa23.37■■□□□ 1.33
GCDH-205ENST00000587072 ROCK2O75116 1388 aaKnown RBP23.37■■□□□ 1.33
GCDH-205ENST00000587072 RALGAPBQ86X10 1494 aa23.36■■□□□ 1.33
GCDH-205ENST00000587072 DCCP43146 1447 aa23.36■■□□□ 1.33
GCDH-205ENST00000587072 UBAP1LF5GYI3 381 aa23.36■■□□□ 1.33
GCDH-205ENST00000587072 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
GCDH-205ENST00000587072 NBPF8Q3BBV2 869 aa23.36■■□□□ 1.33
GCDH-205ENST00000587072 NALCNQ8IZF0 1738 aa23.36■■□□□ 1.33
GCDH-205ENST00000587072 TRAK1Q9UPV9 953 aa23.35■■□□□ 1.33
GCDH-205ENST00000587072 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.34■■□□□ 1.33
GCDH-205ENST00000587072 ARHGEF28Q8N1W1 1705 aaKnown RBP23.33■■□□□ 1.33
GCDH-205ENST00000587072 WAPLQ7Z5K2 1190 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms