RNA–Protein interactions for RNA: ENST00000587072.1

GCDH-205, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 453 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-205ENST00000587072 NISCHQ9Y2I1 1504 aa39.27■■■■□ 3.88
GCDH-205ENST00000587072 CCDC180Q9P1Z9 1646 aa34.85■■■■□ 3.17
GCDH-205ENST00000587072 ABCC9O60706 1549 aa33.77■■■■□ 3
GCDH-205ENST00000587072 ZCCHC6Q5VYS8 1495 aaKnown RBP32.78■■■□□ 2.84
GCDH-205ENST00000587072 NACADO15069 1562 aa32.69■■■□□ 2.82
GCDH-205ENST00000587072 RB1CC1Q8TDY2 1594 aa32.66■■■□□ 2.82
GCDH-205ENST00000587072 DCAF8L2P0C7V8 631 aa32.64■■■□□ 2.82
GCDH-205ENST00000587072 MYO15BQ96JP2 1530 aa32.59■■■□□ 2.81
GCDH-205ENST00000587072 DCAF1Q9Y4B6 1507 aa32.54■■■□□ 2.8
GCDH-205ENST00000587072 UNC13AQ9UPW8 1703 aa31.89■■■□□ 2.69
GCDH-205ENST00000587072 SCRIBQ14160 1630 aa31.77■■■□□ 2.68
GCDH-205ENST00000587072 BICRAQ9NZM4 1560 aa31.61■■■□□ 2.65
GCDH-205ENST00000587072 PABPN1Q86U42 306 aaKnown RBP eCLIP31.56■■■□□ 2.64
GCDH-205ENST00000587072 SHROOM4Q9ULL8 1493 aa31.41■■■□□ 2.62
GCDH-205ENST00000587072 EIF4G1Q04637 1599 aaKnown RBP30.79■■■□□ 2.52
GCDH-205ENST00000587072 DNAJC5BQ9UF47 199 aa30.67■■■□□ 2.5
GCDH-205ENST00000587072 CC2D2AQ9P2K1 1620 aa30.58■■■□□ 2.49
GCDH-205ENST00000587072 CECR2Q9BXF3 1484 aa30.51■■■□□ 2.48
GCDH-205ENST00000587072 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.46
GCDH-205ENST00000587072 SMARCA4P51532 1647 aa30.43■■■□□ 2.46
GCDH-205ENST00000587072 MROH2BQ7Z745 1585 aa30.24■■■□□ 2.43
GCDH-205ENST00000587072 SMARCA2P51531 1590 aa30.2■■■□□ 2.43
GCDH-205ENST00000587072 ATAD2BQ9ULI0 1458 aa30.17■■■□□ 2.42
GCDH-205ENST00000587072 PEG3Q9GZU2 1588 aa30.14■■■□□ 2.42
GCDH-205ENST00000587072 NCAPD3P42695 1498 aa30.12■■■□□ 2.41
GCDH-205ENST00000587072 HMGXB3Q12766 1538 aa30.04■■■□□ 2.4
GCDH-205ENST00000587072 RSF1Q96T23 1441 aaPredicted RBP29.99■■■□□ 2.39
GCDH-205ENST00000587072 BAZ1BQ9UIG0 1483 aaKnown RBP29.97■■■□□ 2.39
GCDH-205ENST00000587072 WIZO95785 1651 aa29.94■■■□□ 2.38
GCDH-205ENST00000587072 TOP2AP11388 1531 aaKnown RBP29.68■■■□□ 2.34
GCDH-205ENST00000587072 SUPT5HO00267 1087 aaKnown RBP29.4■■■□□ 2.3
GCDH-205ENST00000587072 LAMC3Q9Y6N6 1575 aa29.33■■■□□ 2.29
GCDH-205ENST00000587072 NESP48681 1621 aa29.28■■■□□ 2.28
GCDH-205ENST00000587072 CCDC88BA6NC98 1476 aa29.28■■■□□ 2.28
GCDH-205ENST00000587072 CADPSQ9ULU8 1353 aa29.26■■■□□ 2.28
GCDH-205ENST00000587072 CFTRP13569 1480 aa29.15■■■□□ 2.26
GCDH-205ENST00000587072 ERCC6Q03468 1493 aa29.15■■■□□ 2.26
GCDH-205ENST00000587072 PDS5BQ9NTI5 1447 aa29.11■■■□□ 2.25
GCDH-205ENST00000587072 PRDM2Q13029 1718 aa29■■■□□ 2.23
GCDH-205ENST00000587072 KIF21AQ7Z4S6 1674 aa28.99■■■□□ 2.23
GCDH-205ENST00000587072 FANCD2Q9BXW9 1451 aa28.93■■■□□ 2.22
GCDH-205ENST00000587072 CEP164Q9UPV0 1460 aa28.9■■■□□ 2.22
GCDH-205ENST00000587072 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
GCDH-205ENST00000587072 MRC2Q9UBG0 1479 aa28.79■■■□□ 2.2
GCDH-205ENST00000587072 CUX2O14529 1486 aa28.75■■■□□ 2.19
GCDH-205ENST00000587072 WDR62O43379 1518 aa28.69■■■□□ 2.18
GCDH-205ENST00000587072 URB2Q14146 1524 aaKnown RBP28.6■■■□□ 2.17
GCDH-205ENST00000587072 ABCC8Q09428 1581 aa28.55■■■□□ 2.16
GCDH-205ENST00000587072 DNMBPQ6XZF7 1577 aa28.52■■■□□ 2.16
GCDH-205ENST00000587072 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
GCDH-205ENST00000587072 CUX1P39880 1505 aa28.37■■■□□ 2.13
GCDH-205ENST00000587072 WRNQ14191 1432 aaPredicted RBP eCLIP28.31■■■□□ 2.12
GCDH-205ENST00000587072 IFT140Q96RY7 1462 aa28.28■■■□□ 2.12
GCDH-205ENST00000587072 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
GCDH-205ENST00000587072 FGD5Q6ZNL6 1462 aa28.24■■■□□ 2.11
GCDH-205ENST00000587072 TOP2BQ02880 1626 aa28.22■■■□□ 2.11
GCDH-205ENST00000587072 BIVM-ERCC5R4GMW8 1640 aa28.22■■■□□ 2.11
GCDH-205ENST00000587072 SYNJ1O43426 1573 aa28.2■■■□□ 2.1
GCDH-205ENST00000587072 TARBP1Q13395 1621 aaKnown RBP28.16■■■□□ 2.1
GCDH-205ENST00000587072 SOGA1O94964 1423 aa28.15■■■□□ 2.1
GCDH-205ENST00000587072 RAD54L2Q9Y4B4 1467 aa28.11■■■□□ 2.09
GCDH-205ENST00000587072 ZNF608Q9ULD9 1512 aaPredicted RBP28.08■■■□□ 2.08
GCDH-205ENST00000587072 WDR97A6NE52 1622 aa28.03■■■□□ 2.08
GCDH-205ENST00000587072 EIF4G3O43432 1585 aaKnown RBP28.03■■■□□ 2.08
GCDH-205ENST00000587072 ABCA10Q8WWZ4 1543 aa28■■■□□ 2.07
GCDH-205ENST00000587072 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.06
GCDH-205ENST00000587072 TDRD9Q8NDG6 1382 aaKnown RBP27.94■■■□□ 2.06
GCDH-205ENST00000587072 ABCA5Q8WWZ7 1642 aa27.86■■■□□ 2.05
GCDH-205ENST00000587072 GAPVD1Q14C86 1478 aa27.85■■■□□ 2.05
GCDH-205ENST00000587072 GRIN2BQ13224 1484 aa27.83■■■□□ 2.04
GCDH-205ENST00000587072 DNAJC5Q9H3Z4 198 aa27.82■■■□□ 2.04
GCDH-205ENST00000587072 PBRM1Q86U86 1689 aa27.79■■■□□ 2.04
GCDH-205ENST00000587072 TRIM41Q8WV44 630 aa27.79■■■□□ 2.04
GCDH-205ENST00000587072 SNAPC4Q5SXM2 1469 aa27.74■■■□□ 2.03
GCDH-205ENST00000587072 MAGI1Q96QZ7 1491 aaPredicted RBP27.74■■■□□ 2.03
GCDH-205ENST00000587072 KIF27Q86VH2 1401 aa27.71■■■□□ 2.03
GCDH-205ENST00000587072 ERICH3Q5RHP9 1530 aa27.68■■■□□ 2.02
GCDH-205ENST00000587072 SYNJ2O15056 1496 aa27.62■■■□□ 2.01
GCDH-205ENST00000587072 CHD1O14646 1710 aa27.61■■■□□ 2.01
GCDH-205ENST00000587072 CHIC1Q5VXU3 224 aa27.59■■■□□ 2.01
GCDH-205ENST00000587072 ADAMTS12P58397 1594 aa27.59■■■□□ 2.01
GCDH-205ENST00000587072 FBLN2P98095 1184 aa27.57■■■□□ 2
GCDH-205ENST00000587072 OSCARQ8IYS5 282 aa27.56■■■□□ 2
GCDH-205ENST00000587072 CHMP7Q8WUX9 453 aaPredicted RBP27.56■■■□□ 2
GCDH-205ENST00000587072 FHAD1B1AJZ9 1412 aa27.55■■■□□ 2
GCDH-205ENST00000587072 IGF1RP08069 1367 aa27.5■■□□□ 1.99
GCDH-205ENST00000587072 CUL7Q14999 1698 aa27.5■■□□□ 1.99
GCDH-205ENST00000587072 GRIN2AQ12879 1464 aa27.45■■□□□ 1.99
GCDH-205ENST00000587072 RUSC2Q8N2Y8 1516 aa27.45■■□□□ 1.98
GCDH-205ENST00000587072 EEA1Q15075 1411 aa27.38■■□□□ 1.97
GCDH-205ENST00000587072 CARMIL1Q5VZK9 1371 aa27.37■■□□□ 1.97
GCDH-205ENST00000587072 NUP160Q12769 1436 aa27.32■■□□□ 1.96
GCDH-205ENST00000587072 CLASP1Q7Z460 1538 aa27.31■■□□□ 1.96
GCDH-205ENST00000587072 CEP170Q5SW79 1584 aa27.3■■□□□ 1.96
GCDH-205ENST00000587072 RAPGEF2Q9Y4G8 1499 aa27.26■■□□□ 1.95
GCDH-205ENST00000587072 CSRNP3Q8WYN3 585 aa27.23■■□□□ 1.95
GCDH-205ENST00000587072 PRXQ9BXM0 1461 aa27.22■■□□□ 1.95
GCDH-205ENST00000587072 FAM9AQ8IZU1 332 aaPredicted RBP27.17■■□□□ 1.94
GCDH-205ENST00000587072 ARHGEF11O15085 1522 aa27.13■■□□□ 1.93
GCDH-205ENST00000587072 KIAA0586Q9BVV6 1533 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms