RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 TONSLQ96HA7 1378 aa15.69■□□□□ 0.1
CDK5RAP3-232ENST00000584168 CHMP4AQ9BY43 222 aa15.68■□□□□ 0.1
CDK5RAP3-232ENST00000584168 PNNQ9H307 717 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-232ENST00000584168 L3MBTL2Q969R5 705 aa15.67■□□□□ 0.1
CDK5RAP3-232ENST00000584168 ERBINQ96RT1 1412 aa15.66■□□□□ 0.1
CDK5RAP3-232ENST00000584168 MAGI2Q86UL8 1455 aa15.66■□□□□ 0.1
CDK5RAP3-232ENST00000584168 PDCL3Q9H2J4 239 aa15.65■□□□□ 0.1
CDK5RAP3-232ENST00000584168 COL17A1Q9UMD9 1497 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-232ENST00000584168 RGL3Q3MIN7 710 aa15.65■□□□□ 0.1
CDK5RAP3-232ENST00000584168 ANKRD30BQ9BXX2 1392 aa15.64■□□□□ 0.09
CDK5RAP3-232ENST00000584168 ABCA6Q8N139 1617 aa15.64■□□□□ 0.09
CDK5RAP3-232ENST00000584168 KDM2AQ9Y2K7 1162 aa15.64■□□□□ 0.09
CDK5RAP3-232ENST00000584168 MLECQ14165 292 aa15.63■□□□□ 0.09
CDK5RAP3-232ENST00000584168 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
CDK5RAP3-232ENST00000584168 DIP2CQ9Y2E4 1556 aa15.62■□□□□ 0.09
CDK5RAP3-232ENST00000584168 DHX29Q7Z478 1369 aaKnown RBP15.62■□□□□ 0.09
CDK5RAP3-232ENST00000584168 YEATS2Q9ULM3 1422 aa15.62■□□□□ 0.09
CDK5RAP3-232ENST00000584168 A2MP01023 1474 aa15.62■□□□□ 0.09
CDK5RAP3-232ENST00000584168 EIF2AK4Q9P2K8 1649 aaKnown RBP15.61■□□□□ 0.09
CDK5RAP3-232ENST00000584168 SENP3Q9H4L4 574 aaPredicted RBP15.61■□□□□ 0.09
CDK5RAP3-232ENST00000584168 NFKBIBQ15653 356 aa15.6■□□□□ 0.09
CDK5RAP3-232ENST00000584168 UNC13BO14795 1591 aa15.59■□□□□ 0.09
CDK5RAP3-232ENST00000584168 FAM135AQ9P2D6 1515 aa15.58■□□□□ 0.08
CDK5RAP3-232ENST00000584168 ARHGEF40Q8TER5 1519 aa15.58■□□□□ 0.08
CDK5RAP3-232ENST00000584168 KDM5DQ9BY66 1539 aa15.58■□□□□ 0.08
CDK5RAP3-232ENST00000584168 NBPF8Q3BBV2 869 aa15.57■□□□□ 0.08
CDK5RAP3-232ENST00000584168 NPM2Q86SE8 214 aaKnown RBP15.57■□□□□ 0.08
CDK5RAP3-232ENST00000584168 ATP10AO60312 1499 aa15.57■□□□□ 0.08
CDK5RAP3-232ENST00000584168 REREQ9P2R6 1566 aa15.57■□□□□ 0.08
CDK5RAP3-232ENST00000584168 BCORL1Q5H9F3 1711 aa15.57■□□□□ 0.08
CDK5RAP3-232ENST00000584168 DEPDC5O75140 1603 aa15.56■□□□□ 0.08
CDK5RAP3-232ENST00000584168 CLCN1P35523 988 aa15.55■□□□□ 0.08
CDK5RAP3-232ENST00000584168 ZFP91Q96JP5 570 aaPredicted RBP15.55■□□□□ 0.08
CDK5RAP3-232ENST00000584168 RNF17Q9BXT8 1623 aaKnown RBP15.53■□□□□ 0.08
CDK5RAP3-232ENST00000584168 IQGAP3Q86VI3 1631 aa15.52■□□□□ 0.08
CDK5RAP3-232ENST00000584168 FTSJ3Q8IY81 847 aaKnown RBP15.52■□□□□ 0.07
CDK5RAP3-232ENST00000584168 NCLP19338 710 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-232ENST00000584168 PRDM15P57071 1507 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-232ENST00000584168 HNRNPUQ00839 825 aaKnown RBP eCLIP15.51■□□□□ 0.07
CDK5RAP3-232ENST00000584168 AGLP35573 1532 aa15.51■□□□□ 0.07
CDK5RAP3-232ENST00000584168 CHGAP10645 457 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-232ENST00000584168 SAMD1Q6SPF0 538 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-232ENST00000584168 PLA2R1Q13018 1463 aa15.5■□□□□ 0.07
CDK5RAP3-232ENST00000584168 MROH1Q8NDA8 1641 aa15.5■□□□□ 0.07
CDK5RAP3-232ENST00000584168 CFAP65Q6ZU64 1925 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-232ENST00000584168 RPRD2Q5VT52 1461 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-232ENST00000584168 KANK1Q14678 1352 aa15.5■□□□□ 0.07
CDK5RAP3-232ENST00000584168 HOMEZQ8IX15 550 aa15.49■□□□□ 0.07
CDK5RAP3-232ENST00000584168 VWDEQ8N2E2 1590 aa15.49■□□□□ 0.07
CDK5RAP3-232ENST00000584168 ARID4BQ4LE39 1312 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-232ENST00000584168 TPM2P07951 284 aa15.47■□□□□ 0.07
CDK5RAP3-232ENST00000584168 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-232ENST00000584168 TEX2Q8IWB9 1127 aa15.47■□□□□ 0.07
CDK5RAP3-232ENST00000584168 CCDC144AA2RUR9 1427 aa15.46■□□□□ 0.07
CDK5RAP3-232ENST00000584168 HSPA5P11021 654 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-232ENST00000584168 DDRGK1Q96HY6 314 aa15.46■□□□□ 0.07
CDK5RAP3-232ENST00000584168 SMAP1Q8IYB5 467 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-232ENST00000584168 SIGLEC1Q9BZZ2 1709 aa15.45■□□□□ 0.06
CDK5RAP3-232ENST00000584168 FBXO31Q5XUX0 539 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-232ENST00000584168 PLCD3Q8N3E9 789 aa15.45■□□□□ 0.06
CDK5RAP3-232ENST00000584168 ZHX1Q9UKY1 873 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-232ENST00000584168 LMTK2Q8IWU2 1503 aa15.45■□□□□ 0.06
CDK5RAP3-232ENST00000584168 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-232ENST00000584168 UGGT1Q9NYU2 1555 aa15.44■□□□□ 0.06
CDK5RAP3-232ENST00000584168 SECISBP2LQ93073 1101 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-232ENST00000584168 ZNF830Q96NB3 372 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-232ENST00000584168 TET3O43151 1660 aa15.44■□□□□ 0.06
CDK5RAP3-232ENST00000584168 ZC3H13Q5T200 1668 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-232ENST00000584168 CHRM1P11229 460 aaPredicted RBP15.42■□□□□ 0.06
CDK5RAP3-232ENST00000584168 TMEM51Q9NW97 253 aa15.42■□□□□ 0.06
CDK5RAP3-232ENST00000584168 CEP152O94986 1710 aa15.42■□□□□ 0.06
CDK5RAP3-232ENST00000584168 POLR3GLQ9BT43 218 aa15.41■□□□□ 0.06
CDK5RAP3-232ENST00000584168 ABCC3O15438 1527 aa15.41■□□□□ 0.06
CDK5RAP3-232ENST00000584168 TULP1O00294 542 aaPredicted RBP15.41■□□□□ 0.06
CDK5RAP3-232ENST00000584168 NBPF1Q3BBV0 1214 aa15.41■□□□□ 0.06
CDK5RAP3-232ENST00000584168 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
CDK5RAP3-232ENST00000584168 EIF4G2P78344 907 aaKnown RBP eCLIP15.4■□□□□ 0.06
CDK5RAP3-232ENST00000584168 L1TD1Q5T7N2 865 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-232ENST00000584168 E9PCH4 1651 aa15.4■□□□□ 0.06
CDK5RAP3-232ENST00000584168 EFCAB6Q5THR3 1501 aa15.39■□□□□ 0.05
CDK5RAP3-232ENST00000584168 CCDC184Q52MB2 194 aa15.38■□□□□ 0.05
CDK5RAP3-232ENST00000584168 CAMSAP1Q5T5Y3 1602 aa15.37■□□□□ 0.05
CDK5RAP3-232ENST00000584168 NPATQ14207 1427 aa15.37■□□□□ 0.05
CDK5RAP3-232ENST00000584168 VGLL3A8MV65 326 aa15.36■□□□□ 0.05
CDK5RAP3-232ENST00000584168 FRAT2O75474 233 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-232ENST00000584168 CEBPAP49715 358 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-232ENST00000584168 CNTLNQ9NXG0 1405 aa15.34■□□□□ 0.05
CDK5RAP3-232ENST00000584168 UTP14CQ5TAP6 766 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-232ENST00000584168 CARD11Q9BXL7 1154 aa15.34■□□□□ 0.05
CDK5RAP3-232ENST00000584168 ARHGAP31Q2M1Z3 1444 aa15.34■□□□□ 0.05
CDK5RAP3-232ENST00000584168 SPHKAPQ2M3C7 1700 aa15.34■□□□□ 0.05
CDK5RAP3-232ENST00000584168 MAP7D2Q96T17 732 aa15.33■□□□□ 0.05
CDK5RAP3-232ENST00000584168 CLTCQ00610 1675 aaKnown RBP15.33■□□□□ 0.05
CDK5RAP3-232ENST00000584168 PDE4AP27815 886 aa15.33■□□□□ 0.04
CDK5RAP3-232ENST00000584168 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.04
CDK5RAP3-232ENST00000584168 BCCIPQ9P287 314 aaKnown RBP eCLIP15.33■□□□□ 0.04
CDK5RAP3-232ENST00000584168 PTPRTO14522 1441 aa15.33■□□□□ 0.04
CDK5RAP3-232ENST00000584168 IDI1Q13907 227 aa15.32■□□□□ 0.04
CDK5RAP3-232ENST00000584168 TRPM2O94759 1503 aa15.32■□□□□ 0.04
CDK5RAP3-232ENST00000584168 PPP4R3BQ5MIZ7 849 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms