RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 HDGFP51858 240 aaKnown RBP23.28■■□□□ 1.32
CCDC57-213ENST00000581625 ZNF326Q5BKZ1 582 aaKnown RBP23.27■■□□□ 1.32
CCDC57-213ENST00000581625 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.27■■□□□ 1.32
CCDC57-213ENST00000581625 RPGRIP1LQ68CZ1 1315 aa23.26■■□□□ 1.31
CCDC57-213ENST00000581625 TXNDC2Q86VQ3 553 aa23.24■■□□□ 1.31
CCDC57-213ENST00000581625 DMRT2Q9Y5R5 561 aa23.24■■□□□ 1.31
CCDC57-213ENST00000581625 IQGAP1P46940 1657 aa23.24■■□□□ 1.31
CCDC57-213ENST00000581625 NPHP4O75161 1426 aaPredicted RBP23.24■■□□□ 1.31
CCDC57-213ENST00000581625 PPLO60437 1756 aa23.23■■□□□ 1.31
CCDC57-213ENST00000581625 CLSPNQ9HAW4 1339 aa23.23■■□□□ 1.31
CCDC57-213ENST00000581625 NCKAP5LQ9HCH0 1330 aa23.23■■□□□ 1.31
CCDC57-213ENST00000581625 IFT172Q9UG01 1749 aa23.22■■□□□ 1.31
CCDC57-213ENST00000581625 PPP1R15AO75807 674 aaPredicted RBP23.22■■□□□ 1.31
CCDC57-213ENST00000581625 PLEKHG1Q9ULL1 1385 aa23.22■■□□□ 1.31
CCDC57-213ENST00000581625 LTKP29376 864 aa23.21■■□□□ 1.31
CCDC57-213ENST00000581625 MYOM2P54296 1465 aa23.18■■□□□ 1.3
CCDC57-213ENST00000581625 RGL3Q3MIN7 710 aa23.18■■□□□ 1.3
CCDC57-213ENST00000581625 VGFO15240 615 aaPredicted RBP23.17■■□□□ 1.3
CCDC57-213ENST00000581625 SETBP1Q9Y6X0 1596 aa23.17■■□□□ 1.3
CCDC57-213ENST00000581625 DIP2AQ14689 1571 aa23.16■■□□□ 1.3
CCDC57-213ENST00000581625 STAC3Q96MF2 364 aa23.14■■□□□ 1.29
CCDC57-213ENST00000581625 CCER1Q8TC90 406 aaPredicted RBP23.13■■□□□ 1.29
CCDC57-213ENST00000581625 NUTM2DQ5VT03 806 aaPredicted RBP23.12■■□□□ 1.29
CCDC57-213ENST00000581625 SIN3AQ96ST3 1273 aa23.12■■□□□ 1.29
CCDC57-213ENST00000581625 NRXN1Q9ULB1 1477 aa23.11■■□□□ 1.29
CCDC57-213ENST00000581625 NRXN3Q9Y4C0 1643 aa23.11■■□□□ 1.29
CCDC57-213ENST00000581625 PIK3C2GO75747 1445 aa23.09■■□□□ 1.29
CCDC57-213ENST00000581625 NEUROD1Q13562 356 aa23.09■■□□□ 1.29
CCDC57-213ENST00000581625 ADAMTS13Q76LX8 1427 aa23.08■■□□□ 1.29
CCDC57-213ENST00000581625 BCANQ96GW7 911 aa23.08■■□□□ 1.29
CCDC57-213ENST00000581625 LAMC1P11047 1609 aa23.08■■□□□ 1.28
CCDC57-213ENST00000581625 TONSLQ96HA7 1378 aa23.07■■□□□ 1.28
CCDC57-213ENST00000581625 DCAF11Q8TEB1 546 aa23.06■■□□□ 1.28
CCDC57-213ENST00000581625 ADGRF5Q8IZF2 1346 aa23.06■■□□□ 1.28
CCDC57-213ENST00000581625 PIK3R4Q99570 1358 aa23.04■■□□□ 1.28
CCDC57-213ENST00000581625 TBX22Q9Y458 520 aa23.04■■□□□ 1.28
CCDC57-213ENST00000581625 SLC26A8Q96RN1 970 aa23.03■■□□□ 1.28
CCDC57-213ENST00000581625 ALKQ9UM73 1620 aa23.03■■□□□ 1.28
CCDC57-213ENST00000581625 SETD1AO15047 1707 aaKnown RBP23.02■■□□□ 1.28
CCDC57-213ENST00000581625 NWD1Q149M9 1564 aa23.01■■□□□ 1.27
CCDC57-213ENST00000581625 L3MBTL2Q969R5 705 aa23.01■■□□□ 1.27
CCDC57-213ENST00000581625 TIMELESSQ9UNS1 1208 aa22.99■■□□□ 1.27
CCDC57-213ENST00000581625 KDM2AQ9Y2K7 1162 aa22.99■■□□□ 1.27
CCDC57-213ENST00000581625 PRAG1Q86YV5 1406 aa22.99■■□□□ 1.27
CCDC57-213ENST00000581625 CPS1P31327 1500 aa22.98■■□□□ 1.27
CCDC57-213ENST00000581625 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
CCDC57-213ENST00000581625 ZNF335Q9H4Z2 1342 aaPredicted RBP22.97■■□□□ 1.27
CCDC57-213ENST00000581625 NKTRP30414 1462 aaKnown RBP22.97■■□□□ 1.27
CCDC57-213ENST00000581625 KIAA1210Q9ULL0 1709 aa22.96■■□□□ 1.27
CCDC57-213ENST00000581625 CHD2O14647 1828 aaKnown RBP22.95■■□□□ 1.26
CCDC57-213ENST00000581625 LTBP4Q8N2S1 1624 aa22.95■■□□□ 1.26
CCDC57-213ENST00000581625 XRN1Q8IZH2 1706 aaKnown RBP22.94■■□□□ 1.26
CCDC57-213ENST00000581625 METP08581 1390 aa22.94■■□□□ 1.26
CCDC57-213ENST00000581625 C14orf93Q9H972 538 aaKnown RBP22.94■■□□□ 1.26
CCDC57-213ENST00000581625 ASXL1Q8IXJ9 1541 aa22.93■■□□□ 1.26
CCDC57-213ENST00000581625 KCNA6P17658 529 aa22.93■■□□□ 1.26
CCDC57-213ENST00000581625 STRCP1A6NGW2 1772 aa22.91■■□□□ 1.26
CCDC57-213ENST00000581625 PTPRUQ92729 1446 aa22.91■■□□□ 1.26
CCDC57-213ENST00000581625 ADGRB1O14514 1584 aa22.9■■□□□ 1.26
CCDC57-213ENST00000581625 CFAP70Q5T0N1 1121 aa22.89■■□□□ 1.25
CCDC57-213ENST00000581625 KNDC1Q76NI1 1749 aa22.88■■□□□ 1.25
CCDC57-213ENST00000581625 TRPM1Q7Z4N2 1603 aa22.88■■□□□ 1.25
CCDC57-213ENST00000581625 PTCH1Q13635 1447 aa22.88■■□□□ 1.25
CCDC57-213ENST00000581625 TECPR2O15040 1411 aa22.87■■□□□ 1.25
CCDC57-213ENST00000581625 LRPPRCP42704 1394 aaKnown RBP22.87■■□□□ 1.25
CCDC57-213ENST00000581625 YTHDC2Q9H6S0 1430 aaKnown RBP22.86■■□□□ 1.25
CCDC57-213ENST00000581625 AMOTL2Q9Y2J4 779 aa22.86■■□□□ 1.25
CCDC57-213ENST00000581625 IQSEC2Q5JU85 1478 aa22.85■■□□□ 1.25
CCDC57-213ENST00000581625 LRRC7Q96NW7 1537 aa22.85■■□□□ 1.25
CCDC57-213ENST00000581625 RALGAPBQ86X10 1494 aa22.84■■□□□ 1.25
CCDC57-213ENST00000581625 ABCC11Q96J66 1382 aa22.83■■□□□ 1.25
CCDC57-213ENST00000581625 DLC1Q96QB1 1528 aa22.82■■□□□ 1.24
CCDC57-213ENST00000581625 NCOA3Q9Y6Q9 1424 aa22.82■■□□□ 1.24
CCDC57-213ENST00000581625 TMEM132EQ6IEE7 984 aa22.81■■□□□ 1.24
CCDC57-213ENST00000581625 ROCK2O75116 1388 aaKnown RBP22.8■■□□□ 1.24
CCDC57-213ENST00000581625 NBPF8Q3BBV2 869 aa22.79■■□□□ 1.24
CCDC57-213ENST00000581625 FAM135BQ49AJ0 1406 aa22.79■■□□□ 1.24
CCDC57-213ENST00000581625 TMEM94Q12767 1356 aa22.78■■□□□ 1.24
CCDC57-213ENST00000581625 GPRASP1Q5JY77 1395 aa22.78■■□□□ 1.24
CCDC57-213ENST00000581625 ROBO2Q9HCK4 1378 aa22.77■■□□□ 1.24
CCDC57-213ENST00000581625 PROSER2Q86WR7 435 aaPredicted RBP22.77■■□□□ 1.24
CCDC57-213ENST00000581625 CERKQ8TCT0 537 aa22.76■■□□□ 1.23
CCDC57-213ENST00000581625 NBPF1Q3BBV0 1214 aa22.75■■□□□ 1.23
CCDC57-213ENST00000581625 SIRT1Q96EB6 747 aa22.75■■□□□ 1.23
CCDC57-213ENST00000581625 STK26Q9P289 416 aa22.75■■□□□ 1.23
CCDC57-213ENST00000581625 XIRP1Q702N8 1843 aaKnown RBP22.75■■□□□ 1.23
CCDC57-213ENST00000581625 ARHGEF28Q8N1W1 1705 aaKnown RBP22.74■■□□□ 1.23
CCDC57-213ENST00000581625 ADGRL3Q9HAR2 1447 aa22.72■■□□□ 1.23
CCDC57-213ENST00000581625 TRAK1Q9UPV9 953 aa22.71■■□□□ 1.23
CCDC57-213ENST00000581625 DCCP43146 1447 aa22.71■■□□□ 1.23
CCDC57-213ENST00000581625 NALCNQ8IZF0 1738 aa22.71■■□□□ 1.23
CCDC57-213ENST00000581625 MSH6P52701 1360 aa22.7■■□□□ 1.22
CCDC57-213ENST00000581625 EIF3AQ14152 1382 aaKnown RBP22.7■■□□□ 1.22
CCDC57-213ENST00000581625 C14orf37Q86TY3 774 aa22.68■■□□□ 1.22
CCDC57-213ENST00000581625 CARD11Q9BXL7 1154 aa22.68■■□□□ 1.22
CCDC57-213ENST00000581625 PRAM1Q96QH2 718 aa22.67■■□□□ 1.22
CCDC57-213ENST00000581625 CDC42BPGQ6DT37 1551 aa22.67■■□□□ 1.22
CCDC57-213ENST00000581625 RBM33Q96EV2 1170 aaKnown RBP22.66■■□□□ 1.22
CCDC57-213ENST00000581625 ADGRB2O60241 1585 aa22.66■■□□□ 1.22
CCDC57-213ENST00000581625 PLEKHH1Q9ULM0 1364 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms