RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 STAG3Q9UJ98 1225 aa17.73■□□□□ 0.43
CDK5RAP3-217ENST00000580287 ERVK-7P63135 1459 aa17.73■□□□□ 0.43
CDK5RAP3-217ENST00000580287 RALGAPBQ86X10 1494 aa17.73■□□□□ 0.43
CDK5RAP3-217ENST00000580287 MROH2AA6NES4 1674 aa17.72■□□□□ 0.43
CDK5RAP3-217ENST00000580287 WASHC2AQ641Q2 1341 aa17.71■□□□□ 0.43
CDK5RAP3-217ENST00000580287 POLR3GLQ9BT43 218 aa17.7■□□□□ 0.42
CDK5RAP3-217ENST00000580287 PREX1Q8TCU6 1659 aa17.69■□□□□ 0.42
CDK5RAP3-217ENST00000580287 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
CDK5RAP3-217ENST00000580287 KIF1BO60333 1816 aa17.68■□□□□ 0.42
CDK5RAP3-217ENST00000580287 TMEM132EQ6IEE7 984 aa17.67■□□□□ 0.42
CDK5RAP3-217ENST00000580287 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
CDK5RAP3-217ENST00000580287 TRPM1Q7Z4N2 1603 aa17.65■□□□□ 0.42
CDK5RAP3-217ENST00000580287 MADDQ8WXG6 1647 aa17.64■□□□□ 0.41
CDK5RAP3-217ENST00000580287 KIF7Q2M1P5 1343 aa17.63■□□□□ 0.41
CDK5RAP3-217ENST00000580287 STAC3Q96MF2 364 aa17.63■□□□□ 0.41
CDK5RAP3-217ENST00000580287 GPRASP1Q5JY77 1395 aa17.62■□□□□ 0.41
CDK5RAP3-217ENST00000580287 TNRQ92752 1358 aa17.62■□□□□ 0.41
CDK5RAP3-217ENST00000580287 SPATA31D1Q6ZQQ2 1576 aa17.62■□□□□ 0.41
CDK5RAP3-217ENST00000580287 VGFO15240 615 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-217ENST00000580287 RPGRIP1LQ68CZ1 1315 aa17.62■□□□□ 0.41
CDK5RAP3-217ENST00000580287 CCDC7Q96M83 1385 aa17.6■□□□□ 0.41
CDK5RAP3-217ENST00000580287 TMEM131LA2VDJ0 1609 aa17.6■□□□□ 0.41
CDK5RAP3-217ENST00000580287 MYOM2P54296 1465 aa17.6■□□□□ 0.41
CDK5RAP3-217ENST00000580287 NEURL4Q96JN8 1562 aa17.6■□□□□ 0.41
CDK5RAP3-217ENST00000580287 NEXMIFQ5QGS0 1516 aa17.59■□□□□ 0.41
CDK5RAP3-217ENST00000580287 C14orf93Q9H972 538 aaKnown RBP17.59■□□□□ 0.41
CDK5RAP3-217ENST00000580287 TRAK1Q9UPV9 953 aa17.59■□□□□ 0.41
CDK5RAP3-217ENST00000580287 MYO5BQ9ULV0 1848 aa17.58■□□□□ 0.41
CDK5RAP3-217ENST00000580287 A2ML1A8K2U0 1454 aa17.58■□□□□ 0.41
CDK5RAP3-217ENST00000580287 TESK2Q96S53 571 aa17.58■□□□□ 0.4
CDK5RAP3-217ENST00000580287 PIK3C2GO75747 1445 aa17.57■□□□□ 0.4
CDK5RAP3-217ENST00000580287 CNGB1Q14028 1251 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-217ENST00000580287 NRXN1Q9ULB1 1477 aa17.57■□□□□ 0.4
CDK5RAP3-217ENST00000580287 ANP32CO43423 234 aa17.56■□□□□ 0.4
CDK5RAP3-217ENST00000580287 STK26Q9P289 416 aa17.56■□□□□ 0.4
CDK5RAP3-217ENST00000580287 IFT172Q9UG01 1749 aa17.56■□□□□ 0.4
CDK5RAP3-217ENST00000580287 PPLO60437 1756 aa17.55■□□□□ 0.4
CDK5RAP3-217ENST00000580287 FER1L4A9Z1Z3 1794 aa17.54■□□□□ 0.4
CDK5RAP3-217ENST00000580287 RIMS2Q9UQ26 1411 aa17.53■□□□□ 0.4
CDK5RAP3-217ENST00000580287 DISP3Q9P2K9 1392 aa17.52■□□□□ 0.4
CDK5RAP3-217ENST00000580287 C3P01024 1663 aa17.52■□□□□ 0.4
CDK5RAP3-217ENST00000580287 BCANQ96GW7 911 aa17.52■□□□□ 0.4
CDK5RAP3-217ENST00000580287 LTKP29376 864 aa17.51■□□□□ 0.39
CDK5RAP3-217ENST00000580287 SAFB2Q14151 953 aaKnown RBP eCLIP17.51■□□□□ 0.39
CDK5RAP3-217ENST00000580287 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-217ENST00000580287 SCAF11Q99590 1463 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-217ENST00000580287 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-217ENST00000580287 ERICH6Q7L0X2 663 aa17.48■□□□□ 0.39
CDK5RAP3-217ENST00000580287 TMEM2Q9UHN6 1383 aa17.48■□□□□ 0.39
CDK5RAP3-217ENST00000580287 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
CDK5RAP3-217ENST00000580287 TXNDC2Q86VQ3 553 aa17.47■□□□□ 0.39
CDK5RAP3-217ENST00000580287 TMF1P82094 1093 aa17.47■□□□□ 0.39
CDK5RAP3-217ENST00000580287 ADGRB1O14514 1584 aa17.47■□□□□ 0.39
CDK5RAP3-217ENST00000580287 KCNA4P22459 653 aa17.46■□□□□ 0.39
CDK5RAP3-217ENST00000580287 SLC26A8Q96RN1 970 aa17.45■□□□□ 0.38
CDK5RAP3-217ENST00000580287 LAMC1P11047 1609 aa17.45■□□□□ 0.38
CDK5RAP3-217ENST00000580287 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.44■□□□□ 0.38
CDK5RAP3-217ENST00000580287 NLRP1Q9C000 1473 aa17.44■□□□□ 0.38
CDK5RAP3-217ENST00000580287 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
CDK5RAP3-217ENST00000580287 IQGAP1P46940 1657 aa17.43■□□□□ 0.38
CDK5RAP3-217ENST00000580287 ADAMTSL3P82987 1691 aa17.43■□□□□ 0.38
CDK5RAP3-217ENST00000580287 THEMISQ8N1K5 641 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP3-217ENST00000580287 KIAA1210Q9ULL0 1709 aa17.42■□□□□ 0.38
CDK5RAP3-217ENST00000580287 ASXL1Q8IXJ9 1541 aa17.42■□□□□ 0.38
CDK5RAP3-217ENST00000580287 EIF3AQ14152 1382 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP3-217ENST00000580287 METP08581 1390 aa17.42■□□□□ 0.38
CDK5RAP3-217ENST00000580287 UBR1Q8IWV7 1749 aa17.42■□□□□ 0.38
CDK5RAP3-217ENST00000580287 HDGFP51858 240 aaKnown RBP17.41■□□□□ 0.38
CDK5RAP3-217ENST00000580287 PTPRMP28827 1452 aa17.41■□□□□ 0.38
CDK5RAP3-217ENST00000580287 ALKQ9UM73 1620 aa17.41■□□□□ 0.38
CDK5RAP3-217ENST00000580287 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
CDK5RAP3-217ENST00000580287 PRAM1Q96QH2 718 aa17.41■□□□□ 0.38
CDK5RAP3-217ENST00000580287 CCER2I3L3R5 266 aa17.4■□□□□ 0.38
CDK5RAP3-217ENST00000580287 EID1Q9Y6B2 187 aa17.4■□□□□ 0.38
CDK5RAP3-217ENST00000580287 SETBP1Q9Y6X0 1596 aa17.39■□□□□ 0.37
CDK5RAP3-217ENST00000580287 YTHDC2Q9H6S0 1430 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-217ENST00000580287 PANK3Q9H999 370 aa17.38■□□□□ 0.37
CDK5RAP3-217ENST00000580287 POGKQ9P215 609 aa17.38■□□□□ 0.37
CDK5RAP3-217ENST00000580287 MINK1Q8N4C8 1332 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP3-217ENST00000580287 PLEKHH1Q9ULM0 1364 aa17.35■□□□□ 0.37
CDK5RAP3-217ENST00000580287 KDM4FA0A1W2PPD8 638 aa17.35■□□□□ 0.37
CDK5RAP3-217ENST00000580287 CCDC184Q52MB2 194 aa17.35■□□□□ 0.37
CDK5RAP3-217ENST00000580287 MYO3AQ8NEV4 1616 aa17.35■□□□□ 0.37
CDK5RAP3-217ENST00000580287 PRKRIP1Q9H875 184 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-217ENST00000580287 AMER1Q5JTC6 1135 aaPredicted RBP17.34■□□□□ 0.37
CDK5RAP3-217ENST00000580287 CABP2Q9NPB3 220 aa17.34■□□□□ 0.37
CDK5RAP3-217ENST00000580287 NRXN3Q9Y4C0 1643 aa17.34■□□□□ 0.37
CDK5RAP3-217ENST00000580287 ADAMTS13Q76LX8 1427 aa17.34■□□□□ 0.37
CDK5RAP3-217ENST00000580287 POLR1AO95602 1720 aaPredicted RBP17.33■□□□□ 0.36
CDK5RAP3-217ENST00000580287 TMC1Q8TDI8 760 aa17.33■□□□□ 0.36
CDK5RAP3-217ENST00000580287 CEP170BQ9Y4F5 1589 aaPredicted RBP17.32■□□□□ 0.36
CDK5RAP3-217ENST00000580287 PER1O15534 1290 aaPredicted RBP17.32■□□□□ 0.36
CDK5RAP3-217ENST00000580287 PLEKHG1Q9ULL1 1385 aa17.32■□□□□ 0.36
CDK5RAP3-217ENST00000580287 SLC12A5Q9H2X9 1139 aa17.32■□□□□ 0.36
CDK5RAP3-217ENST00000580287 FKBP8Q14318 412 aa17.31■□□□□ 0.36
CDK5RAP3-217ENST00000580287 ARHGAP23Q9P227 1491 aa17.31■□□□□ 0.36
CDK5RAP3-217ENST00000580287 CDCA8Q53HL2 280 aa17.31■□□□□ 0.36
CDK5RAP3-217ENST00000580287 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-217ENST00000580287 LRPPRCP42704 1394 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-217ENST00000580287 ANKLE2Q86XL3 938 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms