RNA–Protein interactions for RNA: ENST00000578875.5

PPP4R1-211, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-211ENST00000578875 TSPY10P0CW01 314 aa13.06□□□□□ -0.32
PPP4R1-211ENST00000578875 ATF3P18847 181 aa13.06□□□□□ -0.32
PPP4R1-211ENST00000578875 CADPS2Q86UW7 1296 aa13.06□□□□□ -0.32
PPP4R1-211ENST00000578875 CCDC125Q86Z20 511 aa13.06□□□□□ -0.32
PPP4R1-211ENST00000578875 C19orf44Q9H6X5 657 aa13.06□□□□□ -0.32
PPP4R1-211ENST00000578875 USP21Q9UK80 565 aa13.06□□□□□ -0.32
PPP4R1-211ENST00000578875 PIK3C2BO00750 1634 aa13.05□□□□□ -0.32
PPP4R1-211ENST00000578875 MAST1Q9Y2H9 1570 aa13.04□□□□□ -0.32
PPP4R1-211ENST00000578875 RSPH4AQ5TD94 716 aa13.04□□□□□ -0.32
PPP4R1-211ENST00000578875 LRRC59Q96AG4 307 aaKnown RBP13.04□□□□□ -0.32
PPP4R1-211ENST00000578875 MTUS2Q5JR59 1369 aa13.04□□□□□ -0.32
PPP4R1-211ENST00000578875 CCDC141Q6ZP82 1450 aa13.04□□□□□ -0.32
PPP4R1-211ENST00000578875 NWD1Q149M9 1564 aa13.03□□□□□ -0.32
PPP4R1-211ENST00000578875 KDM5AP29375 1690 aaKnown RBP13.03□□□□□ -0.32
PPP4R1-211ENST00000578875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.322e-6■■□□□ 14.2
PPP4R1-211ENST00000578875 IFFO2Q5TF58 517 aa13.02□□□□□ -0.33
PPP4R1-211ENST00000578875 TRPC5Q9UL62 973 aaPredicted RBP13.02□□□□□ -0.33
PPP4R1-211ENST00000578875 CEP152O94986 1710 aa13.02□□□□□ -0.33
PPP4R1-211ENST00000578875 YY1P25490 414 aa13.01□□□□□ -0.33
PPP4R1-211ENST00000578875 PNPLA6Q8IY17 1366 aa13.01□□□□□ -0.33
PPP4R1-211ENST00000578875 SETD5Q9C0A6 1442 aa13.01□□□□□ -0.33
PPP4R1-211ENST00000578875 MROH1Q8NDA8 1641 aa13.01□□□□□ -0.33
PPP4R1-211ENST00000578875 FYCO1Q9BQS8 1478 aa13□□□□□ -0.33
PPP4R1-211ENST00000578875 HRCP23327 699 aa13□□□□□ -0.33
PPP4R1-211ENST00000578875 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.99□□□□□ -0.33
PPP4R1-211ENST00000578875 EFCAB6Q5THR3 1501 aa12.99□□□□□ -0.33
PPP4R1-211ENST00000578875 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
PPP4R1-211ENST00000578875 TBX22Q9Y458 520 aa12.98□□□□□ -0.33
PPP4R1-211ENST00000578875 CAMSAP2Q08AD1 1489 aa12.97□□□□□ -0.33
PPP4R1-211ENST00000578875 ARHGAP31Q2M1Z3 1444 aa12.97□□□□□ -0.33
PPP4R1-211ENST00000578875 CHD2O14647 1828 aaKnown RBP12.97□□□□□ -0.33
PPP4R1-211ENST00000578875 NCOA3Q9Y6Q9 1424 aa12.96□□□□□ -0.33
PPP4R1-211ENST00000578875 EP400Q96L91 3159 aa12.96□□□□□ -0.33
PPP4R1-211ENST00000578875 ATRNO75882 1429 aa12.95□□□□□ -0.34
PPP4R1-211ENST00000578875 LRP5O75197 1615 aa12.95□□□□□ -0.34
PPP4R1-211ENST00000578875 PPP1R15AO75807 674 aaPredicted RBP12.94□□□□□ -0.34
PPP4R1-211ENST00000578875 AMOTL2Q9Y2J4 779 aa12.94□□□□□ -0.34
PPP4R1-211ENST00000578875 ASXL1Q8IXJ9 1541 aa12.93□□□□□ -0.34
PPP4R1-211ENST00000578875 GJD4Q96KN9 370 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-211ENST00000578875 BLMP54132 1417 aaPredicted RBP12.93□□□□□ -0.34
PPP4R1-211ENST00000578875 PLEKHG1Q9ULL1 1385 aa12.93□□□□□ -0.34
PPP4R1-211ENST00000578875 RRP7BPQ9NSQ0 103 aa12.91□□□□□ -0.34
PPP4R1-211ENST00000578875 MST1RQ04912 1400 aa12.9□□□□□ -0.34
PPP4R1-211ENST00000578875 CEP162Q5TB80 1403 aa12.9□□□□□ -0.34
PPP4R1-211ENST00000578875 PTPRUQ92729 1446 aa12.9□□□□□ -0.34
PPP4R1-211ENST00000578875 BCL9LQ86UU0 1499 aa12.9□□□□□ -0.34
PPP4R1-211ENST00000578875 ZFYVE9O95405 1425 aa12.89□□□□□ -0.35
PPP4R1-211ENST00000578875 ADAMTS13Q76LX8 1427 aa12.89□□□□□ -0.35
PPP4R1-211ENST00000578875 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
PPP4R1-211ENST00000578875 RIMS2Q9UQ26 1411 aa12.88□□□□□ -0.35
PPP4R1-211ENST00000578875 R3HDM1Q15032 1099 aaKnown RBP12.88□□□□□ -0.35
PPP4R1-211ENST00000578875 ARHGEF5Q12774 1597 aa12.88□□□□□ -0.35
PPP4R1-211ENST00000578875 ORAI2Q96SN7 254 aa12.87□□□□□ -0.35
PPP4R1-211ENST00000578875 SLC52A1Q9NWF4 448 aa12.87□□□□□ -0.35
PPP4R1-211ENST00000578875 CHGAP10645 457 aaKnown RBP12.86□□□□□ -0.35
PPP4R1-211ENST00000578875 HDGFP51858 240 aaKnown RBP12.86□□□□□ -0.35
PPP4R1-211ENST00000578875 NHSL1Q5SYE7 1610 aa12.86□□□□□ -0.35
PPP4R1-211ENST00000578875 EIF2AK4Q9P2K8 1649 aaKnown RBP12.86□□□□□ -0.35
PPP4R1-211ENST00000578875 NOS1P29475 1434 aa12.86□□□□□ -0.35
PPP4R1-211ENST00000578875 ADGRB3O60242 1522 aa12.84□□□□□ -0.35
PPP4R1-211ENST00000578875 SENP3-EIF4A1A0A087X0R7 540 aa12.84□□□□□ -0.35
PPP4R1-211ENST00000578875 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-211ENST00000578875 SEPT12Q8IYM1 358 aa12.84□□□□□ -0.35
PPP4R1-211ENST00000578875 SOS2Q07890 1332 aaPredicted RBP12.84□□□□□ -0.35
PPP4R1-211ENST00000578875 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.36
PPP4R1-211ENST00000578875 DUOX2Q9NRD8 1548 aa12.82□□□□□ -0.36
PPP4R1-211ENST00000578875 KIF15Q9NS87 1388 aa12.81□□□□□ -0.36
PPP4R1-211ENST00000578875 PTCH1Q13635 1447 aa12.81□□□□□ -0.36
PPP4R1-211ENST00000578875 KANK1Q14678 1352 aa12.81□□□□□ -0.36
PPP4R1-211ENST00000578875 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.8□□□□□ -0.36
PPP4R1-211ENST00000578875 MYO5BQ9ULV0 1848 aa12.8□□□□□ -0.36
PPP4R1-211ENST00000578875 PIK3R4Q99570 1358 aa12.8□□□□□ -0.36
PPP4R1-211ENST00000578875 DCCP43146 1447 aa12.79□□□□□ -0.36
PPP4R1-211ENST00000578875 RALGAPBQ86X10 1494 aa12.79□□□□□ -0.36
PPP4R1-211ENST00000578875 BAG6P46379 1132 aa12.79□□□□□ -0.36
PPP4R1-211ENST00000578875 FAM182BQ5T319 152 aa12.79□□□□□ -0.36
PPP4R1-211ENST00000578875 UNC5CLQ8IV45 518 aa12.79□□□□□ -0.36
PPP4R1-211ENST00000578875 BRWD3Q6RI45 1802 aa12.78□□□□□ -0.36
PPP4R1-211ENST00000578875 GLI3P10071 1580 aa12.78□□□□□ -0.36
PPP4R1-211ENST00000578875 XPCQ01831 940 aaPredicted RBP12.78□□□□□ -0.36
PPP4R1-211ENST00000578875 KRT27Q7Z3Y8 459 aa12.78□□□□□ -0.36
PPP4R1-211ENST00000578875 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
PPP4R1-211ENST00000578875 ZNF784Q8NCA9 323 aaPredicted RBP12.77□□□□□ -0.37
PPP4R1-211ENST00000578875 CHIC2Q9UKJ5 165 aa12.77□□□□□ -0.37
PPP4R1-211ENST00000578875 ADGRL3Q9HAR2 1447 aa12.76□□□□□ -0.37
PPP4R1-211ENST00000578875 TRPM2O94759 1503 aa12.76□□□□□ -0.37
PPP4R1-211ENST00000578875 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
PPP4R1-211ENST00000578875 METP08581 1390 aa12.75□□□□□ -0.37
PPP4R1-211ENST00000578875 EZH2Q15910 746 aaKnown RBP12.75□□□□□ -0.37
PPP4R1-211ENST00000578875 TMEM131LA2VDJ0 1609 aa12.74□□□□□ -0.37
PPP4R1-211ENST00000578875 LMTK2Q8IWU2 1503 aa12.74□□□□□ -0.37
PPP4R1-211ENST00000578875 MYOM2P54296 1465 aa12.74□□□□□ -0.37
PPP4R1-211ENST00000578875 ERBINQ96RT1 1412 aa12.74□□□□□ -0.37
PPP4R1-211ENST00000578875 C1QTNF8P60827 252 aa12.73□□□□□ -0.37
PPP4R1-211ENST00000578875 ABCC5O15440 1437 aa12.72□□□□□ -0.37
PPP4R1-211ENST00000578875 PLEKHG5O94827 1062 aa12.72□□□□□ -0.37
PPP4R1-211ENST00000578875 KANK4Q5T7N3 995 aaPredicted RBP12.72□□□□□ -0.37
PPP4R1-211ENST00000578875 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
PPP4R1-211ENST00000578875 GCC2Q8IWJ2 1684 aa12.71□□□□□ -0.37
PPP4R1-211ENST00000578875 FOXO3O43524 673 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms