RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
CDK5RAP3-209ENST00000578663 C8orf37Q96NL8 207 aa11.72□□□□□ -0.53
CDK5RAP3-209ENST00000578663 TET3O43151 1660 aa11.71□□□□□ -0.53
CDK5RAP3-209ENST00000578663 ERVK-7P63135 1459 aa11.71□□□□□ -0.53
CDK5RAP3-209ENST00000578663 BLMP54132 1417 aaPredicted RBP11.71□□□□□ -0.53
CDK5RAP3-209ENST00000578663 CEP162Q5TB80 1403 aa11.71□□□□□ -0.53
CDK5RAP3-209ENST00000578663 CHD2O14647 1828 aaKnown RBP11.71□□□□□ -0.54
CDK5RAP3-209ENST00000578663 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.71□□□□□ -0.54
CDK5RAP3-209ENST00000578663 ZNF644Q9H582 1327 aaPredicted RBP11.7□□□□□ -0.54
CDK5RAP3-209ENST00000578663 RSPH4AQ5TD94 716 aa11.7□□□□□ -0.54
CDK5RAP3-209ENST00000578663 TXNDC2Q86VQ3 553 aa11.69□□□□□ -0.54
CDK5RAP3-209ENST00000578663 ARHGEF5Q12774 1597 aa11.69□□□□□ -0.54
CDK5RAP3-209ENST00000578663 EIF2AK4Q9P2K8 1649 aaKnown RBP11.68□□□□□ -0.54
CDK5RAP3-209ENST00000578663 C1QTNF8P60827 252 aa11.68□□□□□ -0.54
CDK5RAP3-209ENST00000578663 CAMSAP2Q08AD1 1489 aa11.68□□□□□ -0.54
CDK5RAP3-209ENST00000578663 CAMTA1Q9Y6Y1 1673 aa11.68□□□□□ -0.54
CDK5RAP3-209ENST00000578663 ATRNO75882 1429 aa11.68□□□□□ -0.54
CDK5RAP3-209ENST00000578663 SETD5Q9C0A6 1442 aa11.67□□□□□ -0.54
CDK5RAP3-209ENST00000578663 ZNF784Q8NCA9 323 aaPredicted RBP11.66□□□□□ -0.54
CDK5RAP3-209ENST00000578663 MROH1Q8NDA8 1641 aa11.65□□□□□ -0.54
CDK5RAP3-209ENST00000578663 UNC13BO14795 1591 aa11.65□□□□□ -0.54
CDK5RAP3-209ENST00000578663 SPHKAPQ2M3C7 1700 aa11.65□□□□□ -0.54
CDK5RAP3-209ENST00000578663 PIK3C2BO00750 1634 aa11.64□□□□□ -0.55
CDK5RAP3-209ENST00000578663 CHD4Q14839 1912 aa11.63□□□□□ -0.55
CDK5RAP3-209ENST00000578663 ARHGAP31Q2M1Z3 1444 aa11.62□□□□□ -0.55
CDK5RAP3-209ENST00000578663 TRPC5Q9UL62 973 aaPredicted RBP11.62□□□□□ -0.55
CDK5RAP3-209ENST00000578663 PNPLA6Q8IY17 1366 aa11.62□□□□□ -0.55
CDK5RAP3-209ENST00000578663 UTRNP46939 3433 aa11.61□□□□□ -0.55
CDK5RAP3-209ENST00000578663 CEP152O94986 1710 aa11.61□□□□□ -0.55
CDK5RAP3-209ENST00000578663 BRINP3Q76B58 766 aa11.61□□□□□ -0.55
CDK5RAP3-209ENST00000578663 SLC26A8Q96RN1 970 aa11.61□□□□□ -0.55
CDK5RAP3-209ENST00000578663 USP21Q9UK80 565 aa11.61□□□□□ -0.55
CDK5RAP3-209ENST00000578663 ASXL1Q8IXJ9 1541 aa11.6□□□□□ -0.55
CDK5RAP3-209ENST00000578663 MARF1Q9Y4F3 1742 aaKnown RBP11.6□□□□□ -0.55
CDK5RAP3-209ENST00000578663 TSPY4P0CV99 314 aa11.6□□□□□ -0.55
CDK5RAP3-209ENST00000578663 TSPY10P0CW01 314 aa11.6□□□□□ -0.55
CDK5RAP3-209ENST00000578663 EID1Q9Y6B2 187 aa11.6□□□□□ -0.55
CDK5RAP3-209ENST00000578663 TMEM2Q9UHN6 1383 aa11.59□□□□□ -0.55
CDK5RAP3-209ENST00000578663 SLC34A2O95436 690 aa11.58□□□□□ -0.56
CDK5RAP3-209ENST00000578663 ADAMTS2O95450 1211 aa11.58□□□□□ -0.56
CDK5RAP3-209ENST00000578663 GLI3P10071 1580 aa11.58□□□□□ -0.56
CDK5RAP3-209ENST00000578663 DUOX2Q9NRD8 1548 aa11.57□□□□□ -0.56
CDK5RAP3-209ENST00000578663 FNBP4Q8N3X1 1017 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP3-209ENST00000578663 NCOA3Q9Y6Q9 1424 aa11.57□□□□□ -0.56
CDK5RAP3-209ENST00000578663 EFCAB6Q5THR3 1501 aa11.56□□□□□ -0.56
CDK5RAP3-209ENST00000578663 R3HDM1Q15032 1099 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-209ENST00000578663 CHIC1Q5VXU3 224 aa11.56□□□□□ -0.56
CDK5RAP3-209ENST00000578663 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP3-209ENST00000578663 LRRC59Q96AG4 307 aaKnown RBP11.54□□□□□ -0.56
CDK5RAP3-209ENST00000578663 ERBINQ96RT1 1412 aa11.53□□□□□ -0.56
CDK5RAP3-209ENST00000578663 SF3B2Q13435 895 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP3-209ENST00000578663 CADPS2Q86UW7 1296 aa11.53□□□□□ -0.56
CDK5RAP3-209ENST00000578663 ADGRB3O60242 1522 aa11.51□□□□□ -0.57
CDK5RAP3-209ENST00000578663 LMTK2Q8IWU2 1503 aa11.51□□□□□ -0.57
CDK5RAP3-209ENST00000578663 COL22A1Q8NFW1 1626 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-209ENST00000578663 DDX17Q92841 729 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-209ENST00000578663 RGPD1P0DJD0 1748 aa11.51□□□□□ -0.57
CDK5RAP3-209ENST00000578663 PTCH1Q13635 1447 aa11.51□□□□□ -0.57
CDK5RAP3-209ENST00000578663 LAMC1P11047 1609 aa11.5□□□□□ -0.57
CDK5RAP3-209ENST00000578663 TNS1Q9HBL0 1735 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-209ENST00000578663 GJD4Q96KN9 370 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-209ENST00000578663 C19orf44Q9H6X5 657 aa11.49□□□□□ -0.57
CDK5RAP3-209ENST00000578663 KIF15Q9NS87 1388 aa11.49□□□□□ -0.57
CDK5RAP3-209ENST00000578663 MYOM3Q5VTT5 1437 aa11.49□□□□□ -0.57
CDK5RAP3-209ENST00000578663 MYO5BQ9ULV0 1848 aa11.49□□□□□ -0.57
CDK5RAP3-209ENST00000578663 ATF3P18847 181 aa11.48□□□□□ -0.57
CDK5RAP3-209ENST00000578663 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
CDK5RAP3-209ENST00000578663 MST1RQ04912 1400 aa11.48□□□□□ -0.57
CDK5RAP3-209ENST00000578663 RALGAPBQ86X10 1494 aa11.48□□□□□ -0.57
CDK5RAP3-209ENST00000578663 CROCC2H7BZ55 1655 aa11.47□□□□□ -0.57
CDK5RAP3-209ENST00000578663 NOS1P29475 1434 aa11.47□□□□□ -0.57
CDK5RAP3-209ENST00000578663 KANK1Q14678 1352 aa11.47□□□□□ -0.57
CDK5RAP3-209ENST00000578663 NINLQ9Y2I6 1382 aa11.47□□□□□ -0.57
CDK5RAP3-209ENST00000578663 BAG6P46379 1132 aa11.47□□□□□ -0.57
CDK5RAP3-209ENST00000578663 C14orf37Q86TY3 774 aa11.46□□□□□ -0.57
CDK5RAP3-209ENST00000578663 PLEKHG1Q9ULL1 1385 aa11.45□□□□□ -0.58
CDK5RAP3-209ENST00000578663 DCAF8L1A6NGE4 600 aa11.45□□□□□ -0.58
CDK5RAP3-209ENST00000578663 EN1Q05925 392 aaPredicted RBP11.45□□□□□ -0.58
CDK5RAP3-209ENST00000578663 IDI1Q13907 227 aa11.45□□□□□ -0.58
CDK5RAP3-209ENST00000578663 ZFYVE9O95405 1425 aa11.44□□□□□ -0.58
CDK5RAP3-209ENST00000578663 DCCP43146 1447 aa11.44□□□□□ -0.58
CDK5RAP3-209ENST00000578663 RREB1Q92766 1687 aa11.43□□□□□ -0.58
CDK5RAP3-209ENST00000578663 SLC52A1Q9NWF4 448 aa11.43□□□□□ -0.58
CDK5RAP3-209ENST00000578663 RPRD2Q5VT52 1461 aaKnown RBP11.43□□□□□ -0.58
CDK5RAP3-209ENST00000578663 NUP188Q5SRE5 1749 aa11.43□□□□□ -0.58
CDK5RAP3-209ENST00000578663 MYOM2P54296 1465 aa11.42□□□□□ -0.58
CDK5RAP3-209ENST00000578663 PIK3R4Q99570 1358 aa11.41□□□□□ -0.58
CDK5RAP3-209ENST00000578663 DISP2A7MBM2 1401 aa11.41□□□□□ -0.58
CDK5RAP3-209ENST00000578663 ABCC5O15440 1437 aa11.41□□□□□ -0.58
CDK5RAP3-209ENST00000578663 SEPT12Q8IYM1 358 aa11.4□□□□□ -0.58
CDK5RAP3-209ENST00000578663 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.4□□□□□ -0.588e-7■□□□□ 10.6
CDK5RAP3-209ENST00000578663 TBX22Q9Y458 520 aa11.4□□□□□ -0.58
CDK5RAP3-209ENST00000578663 GIGYF1O75420 1035 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP3-209ENST00000578663 PCDH10Q9P2E7 1040 aa11.39□□□□□ -0.59
CDK5RAP3-209ENST00000578663 RIMS2Q9UQ26 1411 aa11.39□□□□□ -0.59
CDK5RAP3-209ENST00000578663 VPS8Q8N3P4 1428 aa11.38□□□□□ -0.59
CDK5RAP3-209ENST00000578663 HDGFP51858 240 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP3-209ENST00000578663 TRPM2O94759 1503 aa11.38□□□□□ -0.59
CDK5RAP3-209ENST00000578663 SLIT2O94813 1529 aa11.38□□□□□ -0.59
CDK5RAP3-209ENST00000578663 TMEM131LA2VDJ0 1609 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms