RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 NUTM2DQ5VT03 806 aaPredicted RBP16.83■□□□□ 0.28
ERBB2-208ENST00000578630 ANKRD30BQ9BXX2 1392 aa16.83■□□□□ 0.28
ERBB2-208ENST00000578630 RIMS2Q9UQ26 1411 aa16.83■□□□□ 0.28
ERBB2-208ENST00000578630 TMEM131LA2VDJ0 1609 aa16.81■□□□□ 0.28
ERBB2-208ENST00000578630 MED14O60244 1454 aa16.81■□□□□ 0.28
ERBB2-208ENST00000578630 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
ERBB2-208ENST00000578630 ZFYVE9O95405 1425 aa16.78■□□□□ 0.28
ERBB2-208ENST00000578630 SLC26A8Q96RN1 970 aa16.77■□□□□ 0.28
ERBB2-208ENST00000578630 PLEKHG1Q9ULL1 1385 aa16.77■□□□□ 0.27
ERBB2-208ENST00000578630 KIF1BO60333 1816 aa16.76■□□□□ 0.27
ERBB2-208ENST00000578630 SENP3Q9H4L4 574 aaPredicted RBP16.76■□□□□ 0.27
ERBB2-208ENST00000578630 TBX22Q9Y458 520 aa16.76■□□□□ 0.27
ERBB2-208ENST00000578630 ZNF335Q9H4Z2 1342 aaPredicted RBP16.74■□□□□ 0.27
ERBB2-208ENST00000578630 POLR1AO95602 1720 aaPredicted RBP16.74■□□□□ 0.27
ERBB2-208ENST00000578630 STAC3Q96MF2 364 aa16.74■□□□□ 0.27
ERBB2-208ENST00000578630 NEURL4Q96JN8 1562 aa16.73■□□□□ 0.27
ERBB2-208ENST00000578630 DHX57Q6P158 1386 aaKnown RBP16.73■□□□□ 0.27
ERBB2-208ENST00000578630 MYO5BQ9ULV0 1848 aa16.73■□□□□ 0.27
ERBB2-208ENST00000578630 SPATA31E1Q6ZUB1 1445 aa16.72■□□□□ 0.27
ERBB2-208ENST00000578630 CERKQ8TCT0 537 aa16.72■□□□□ 0.27
ERBB2-208ENST00000578630 KCNA6P17658 529 aa16.71■□□□□ 0.27
ERBB2-208ENST00000578630 IQGAP1P46940 1657 aa16.71■□□□□ 0.27
ERBB2-208ENST00000578630 NEUROD1Q13562 356 aa16.7■□□□□ 0.26
ERBB2-208ENST00000578630 DCAF11Q8TEB1 546 aa16.7■□□□□ 0.26
ERBB2-208ENST00000578630 SIN3AQ96ST3 1273 aa16.69■□□□□ 0.26
ERBB2-208ENST00000578630 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
ERBB2-208ENST00000578630 ADGRF5Q8IZF2 1346 aa16.68■□□□□ 0.26
ERBB2-208ENST00000578630 NEXMIFQ5QGS0 1516 aa16.66■□□□□ 0.26
ERBB2-208ENST00000578630 PIK3R4Q99570 1358 aa16.65■□□□□ 0.26
ERBB2-208ENST00000578630 ADAMTS13Q76LX8 1427 aa16.65■□□□□ 0.26
ERBB2-208ENST00000578630 PROSER2Q86WR7 435 aaPredicted RBP16.65■□□□□ 0.26
ERBB2-208ENST00000578630 AMOTL2Q9Y2J4 779 aa16.64■□□□□ 0.25
ERBB2-208ENST00000578630 CPS1P31327 1500 aa16.62■□□□□ 0.25
ERBB2-208ENST00000578630 C14orf93Q9H972 538 aaKnown RBP16.62■□□□□ 0.25
ERBB2-208ENST00000578630 LTBP4Q8N2S1 1624 aa16.62■□□□□ 0.25
ERBB2-208ENST00000578630 CCER1Q8TC90 406 aaPredicted RBP16.6■□□□□ 0.25
ERBB2-208ENST00000578630 L3MBTL2Q969R5 705 aa16.6■□□□□ 0.25
ERBB2-208ENST00000578630 CLSPNQ9HAW4 1339 aa16.6■□□□□ 0.25
ERBB2-208ENST00000578630 DIP2AQ14689 1571 aa16.6■□□□□ 0.25
ERBB2-208ENST00000578630 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
ERBB2-208ENST00000578630 CFAP70Q5T0N1 1121 aa16.59■□□□□ 0.25
ERBB2-208ENST00000578630 METP08581 1390 aa16.59■□□□□ 0.25
ERBB2-208ENST00000578630 PPLO60437 1756 aa16.59■□□□□ 0.25
ERBB2-208ENST00000578630 TOM1O60784 492 aa16.57■□□□□ 0.24
ERBB2-208ENST00000578630 MYOM2P54296 1465 aa16.56■□□□□ 0.24
ERBB2-208ENST00000578630 TMEM132EQ6IEE7 984 aa16.56■□□□□ 0.24
ERBB2-208ENST00000578630 C14orf37Q86TY3 774 aa16.56■□□□□ 0.24
ERBB2-208ENST00000578630 FBXO41Q8TF61 875 aa16.56■□□□□ 0.24
ERBB2-208ENST00000578630 ALKQ9UM73 1620 aa16.56■□□□□ 0.24
ERBB2-208ENST00000578630 IQSEC2Q5JU85 1478 aa16.55■□□□□ 0.24
ERBB2-208ENST00000578630 PIK3C2GO75747 1445 aa16.55■□□□□ 0.24
ERBB2-208ENST00000578630 RBM33Q96EV2 1170 aaKnown RBP16.55■□□□□ 0.24
ERBB2-208ENST00000578630 STK26Q9P289 416 aa16.55■□□□□ 0.24
ERBB2-208ENST00000578630 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
ERBB2-208ENST00000578630 TMEM94Q12767 1356 aa16.54■□□□□ 0.24
ERBB2-208ENST00000578630 TONSLQ96HA7 1378 aa16.54■□□□□ 0.24
ERBB2-208ENST00000578630 UBAP1LF5GYI3 381 aa16.54■□□□□ 0.24
ERBB2-208ENST00000578630 PTPRUQ92729 1446 aa16.53■□□□□ 0.24
ERBB2-208ENST00000578630 NKTRP30414 1462 aaKnown RBP16.53■□□□□ 0.24
ERBB2-208ENST00000578630 NRXN1Q9ULB1 1477 aa16.53■□□□□ 0.24
ERBB2-208ENST00000578630 NRXN3Q9Y4C0 1643 aa16.52■□□□□ 0.24
ERBB2-208ENST00000578630 C19orf44Q9H6X5 657 aa16.52■□□□□ 0.24
ERBB2-208ENST00000578630 TIMELESSQ9UNS1 1208 aa16.52■□□□□ 0.24
ERBB2-208ENST00000578630 NCOA3Q9Y6Q9 1424 aa16.52■□□□□ 0.23
ERBB2-208ENST00000578630 CHD2O14647 1828 aaKnown RBP16.52■□□□□ 0.23
ERBB2-208ENST00000578630 IFT172Q9UG01 1749 aa16.51■□□□□ 0.23
ERBB2-208ENST00000578630 SIRT1Q96EB6 747 aa16.51■□□□□ 0.23
ERBB2-208ENST00000578630 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
ERBB2-208ENST00000578630 ABCC11Q96J66 1382 aa16.51■□□□□ 0.23
ERBB2-208ENST00000578630 MSH6P52701 1360 aa16.5■□□□□ 0.23
ERBB2-208ENST00000578630 STRCP1A6NGW2 1772 aa16.49■□□□□ 0.23
ERBB2-208ENST00000578630 ATF3P18847 181 aa16.49■□□□□ 0.23
ERBB2-208ENST00000578630 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
ERBB2-208ENST00000578630 YTHDC2Q9H6S0 1430 aaKnown RBP16.47■□□□□ 0.23
ERBB2-208ENST00000578630 CADPS2Q86UW7 1296 aa16.47■□□□□ 0.23
ERBB2-208ENST00000578630 POGKQ9P215 609 aa16.47■□□□□ 0.23
ERBB2-208ENST00000578630 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
ERBB2-208ENST00000578630 PIP4K2BP78356 416 aa16.46■□□□□ 0.23
ERBB2-208ENST00000578630 WAPLQ7Z5K2 1190 aa16.46■□□□□ 0.23
ERBB2-208ENST00000578630 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
ERBB2-208ENST00000578630 PRAG1Q86YV5 1406 aa16.45■□□□□ 0.22
ERBB2-208ENST00000578630 NBPF1Q3BBV0 1214 aa16.45■□□□□ 0.22
ERBB2-208ENST00000578630 ROBO2Q9HCK4 1378 aa16.45■□□□□ 0.22
ERBB2-208ENST00000578630 ILDR1Q86SU0 546 aaPredicted RBP16.44■□□□□ 0.22
ERBB2-208ENST00000578630 SLAIN2Q9P270 581 aa16.44■□□□□ 0.22
ERBB2-208ENST00000578630 PTCH1Q13635 1447 aa16.44■□□□□ 0.22
ERBB2-208ENST00000578630 PRAM1Q96QH2 718 aa16.43■□□□□ 0.22
ERBB2-208ENST00000578630 LAMC1P11047 1609 aa16.42■□□□□ 0.22
ERBB2-208ENST00000578630 NBPF8Q3BBV2 869 aa16.42■□□□□ 0.22
ERBB2-208ENST00000578630 TECPR2O15040 1411 aa16.42■□□□□ 0.22
ERBB2-208ENST00000578630 FAM135BQ49AJ0 1406 aa16.41■□□□□ 0.22
ERBB2-208ENST00000578630 SETD1AO15047 1707 aaKnown RBP16.41■□□□□ 0.22
ERBB2-208ENST00000578630 XRN1Q8IZH2 1706 aaKnown RBP16.41■□□□□ 0.22
ERBB2-208ENST00000578630 SAFB2Q14151 953 aaKnown RBP eCLIP16.39■□□□□ 0.21
ERBB2-208ENST00000578630 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
ERBB2-208ENST00000578630 ADGRL3Q9HAR2 1447 aa16.37■□□□□ 0.21
ERBB2-208ENST00000578630 ASXL1Q8IXJ9 1541 aa16.37■□□□□ 0.21
ERBB2-208ENST00000578630 CARD11Q9BXL7 1154 aa16.37■□□□□ 0.21
ERBB2-208ENST00000578630 ADGRB1O14514 1584 aa16.37■□□□□ 0.21
ERBB2-208ENST00000578630 PLEKHH1Q9ULM0 1364 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms