RNA–Protein interactions for RNA: ENST00000576377.1

SLC12A4-216, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-216ENST00000576377 CASKIN1Q8WXD9 1431 aa24.36■■□□□ 1.49
SLC12A4-216ENST00000576377 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
SLC12A4-216ENST00000576377 PSDA5PKW4 1024 aaPredicted RBP24.35■■□□□ 1.49
SLC12A4-216ENST00000576377 BRINP3Q76B58 766 aa24.35■■□□□ 1.49
SLC12A4-216ENST00000576377 BCL9LQ86UU0 1499 aa24.34■■□□□ 1.49
SLC12A4-216ENST00000576377 CHD2O14647 1828 aaKnown RBP24.34■■□□□ 1.49
SLC12A4-216ENST00000576377 MROH1Q8NDA8 1641 aa24.33■■□□□ 1.49
SLC12A4-216ENST00000576377 HRCP23327 699 aa24.33■■□□□ 1.49
SLC12A4-216ENST00000576377 BLMP54132 1417 aaPredicted RBP24.32■■□□□ 1.48
SLC12A4-216ENST00000576377 PNPLA6Q8IY17 1366 aa24.3■■□□□ 1.48
SLC12A4-216ENST00000576377 EEA1Q15075 1411 aa24.3■■□□□ 1.48
SLC12A4-216ENST00000576377 EFCAB6Q5THR3 1501 aa24.3■■□□□ 1.48
SLC12A4-216ENST00000576377 ASXL1Q8IXJ9 1541 aa24.3■■□□□ 1.48
SLC12A4-216ENST00000576377 ATRNO75882 1429 aa24.29■■□□□ 1.48
SLC12A4-216ENST00000576377 ADAMTS2O95450 1211 aa24.29■■□□□ 1.48
SLC12A4-216ENST00000576377 CCDC141Q6ZP82 1450 aa24.28■■□□□ 1.48
SLC12A4-216ENST00000576377 USP21Q9UK80 565 aa24.28■■□□□ 1.48
SLC12A4-216ENST00000576377 TRPC5Q9UL62 973 aaPredicted RBP24.28■■□□□ 1.48
SLC12A4-216ENST00000576377 C14orf37Q86TY3 774 aa24.27■■□□□ 1.48
SLC12A4-216ENST00000576377 CADPS2Q86UW7 1296 aa24.27■■□□□ 1.48
SLC12A4-216ENST00000576377 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
SLC12A4-216ENST00000576377 NCOA3Q9Y6Q9 1424 aa24.26■■□□□ 1.47
SLC12A4-216ENST00000576377 SENP3-EIF4A1A0A087X0R7 540 aa24.23■■□□□ 1.47
SLC12A4-216ENST00000576377 ATF3P18847 181 aa24.23■■□□□ 1.47
SLC12A4-216ENST00000576377 STAG3Q9UJ98 1225 aa24.22■■□□□ 1.47
SLC12A4-216ENST00000576377 LRRC59Q96AG4 307 aaKnown RBP24.2■■□□□ 1.46
SLC12A4-216ENST00000576377 BCANQ96GW7 911 aa24.19■■□□□ 1.46
SLC12A4-216ENST00000576377 C19orf44Q9H6X5 657 aa24.19■■□□□ 1.46
SLC12A4-216ENST00000576377 DDX17Q92841 729 aaKnown RBP24.18■■□□□ 1.46
SLC12A4-216ENST00000576377 FYCO1Q9BQS8 1478 aa24.18■■□□□ 1.46
SLC12A4-216ENST00000576377 UBTFP17480 764 aaKnown RBP24.17■■□□□ 1.46
SLC12A4-216ENST00000576377 EIF2AK4Q9P2K8 1649 aaKnown RBP24.17■■□□□ 1.46
SLC12A4-216ENST00000576377 ARHGAP31Q2M1Z3 1444 aa24.16■■□□□ 1.46
SLC12A4-216ENST00000576377 FNBP4Q8N3X1 1017 aaPredicted RBP24.15■■□□□ 1.46
SLC12A4-216ENST00000576377 UNC13BO14795 1591 aa24.12■■□□□ 1.45
SLC12A4-216ENST00000576377 BRWD3Q6RI45 1802 aa24.12■■□□□ 1.45
SLC12A4-216ENST00000576377 ADGRB3O60242 1522 aa24.1■■□□□ 1.45
SLC12A4-216ENST00000576377 IDI1Q13907 227 aa24.1■■□□□ 1.45
SLC12A4-216ENST00000576377 SF3B2Q13435 895 aaKnown RBP24.09■■□□□ 1.45
SLC12A4-216ENST00000576377 MST1RQ04912 1400 aa24.09■■□□□ 1.45
SLC12A4-216ENST00000576377 PLEKHG1Q9ULL1 1385 aa24.06■■□□□ 1.44
SLC12A4-216ENST00000576377 PTCH1Q13635 1447 aa24.05■■□□□ 1.44
SLC12A4-216ENST00000576377 CEP350Q5VT06 3117 aa24.04■■□□□ 1.44
SLC12A4-216ENST00000576377 SPHKAPQ2M3C7 1700 aa24.04■■□□□ 1.44
SLC12A4-216ENST00000576377 DCCP43146 1447 aa24.03■■□□□ 1.44
SLC12A4-216ENST00000576377 R3HDM1Q15032 1099 aaKnown RBP24.03■■□□□ 1.44
SLC12A4-216ENST00000576377 GJD4Q96KN9 370 aaPredicted RBP24.03■■□□□ 1.44
SLC12A4-216ENST00000576377 GLI3P10071 1580 aa24.03■■□□□ 1.44
SLC12A4-216ENST00000576377 ARHGEF5Q12774 1597 aa24.03■■□□□ 1.44
SLC12A4-216ENST00000576377 MTUS2Q5JR59 1369 aa24.03■■□□□ 1.44
SLC12A4-216ENST00000576377 ZFYVE9O95405 1425 aa24.02■■□□□ 1.44
SLC12A4-216ENST00000576377 ZNF784Q8NCA9 323 aaPredicted RBP23.98■■□□□ 1.43
SLC12A4-216ENST00000576377 TBX22Q9Y458 520 aa23.98■■□□□ 1.43
SLC12A4-216ENST00000576377 MYO5BQ9ULV0 1848 aa23.98■■□□□ 1.43
SLC12A4-216ENST00000576377 RSPH4AQ5TD94 716 aa23.97■■□□□ 1.43
SLC12A4-216ENST00000576377 RALGAPBQ86X10 1494 aa23.96■■□□□ 1.43
SLC12A4-216ENST00000576377 ADAMTS13Q76LX8 1427 aa23.96■■□□□ 1.43
SLC12A4-216ENST00000576377 C1QTNF8P60827 252 aa23.95■■□□□ 1.42
SLC12A4-216ENST00000576377 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
SLC12A4-216ENST00000576377 TSPY10P0CW01 314 aa23.94■■□□□ 1.42
SLC12A4-216ENST00000576377 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.93■■□□□ 1.42
SLC12A4-216ENST00000576377 MARF1Q9Y4F3 1742 aaKnown RBP23.93■■□□□ 1.42
SLC12A4-216ENST00000576377 COL22A1Q8NFW1 1626 aaPredicted RBP23.93■■□□□ 1.42
SLC12A4-216ENST00000576377 TRPM2O94759 1503 aa23.93■■□□□ 1.42
SLC12A4-216ENST00000576377 PPP1R15AO75807 674 aaPredicted RBP23.92■■□□□ 1.42
SLC12A4-216ENST00000576377 CAMTA1Q9Y6Y1 1673 aa23.92■■□□□ 1.42
SLC12A4-216ENST00000576377 PTPRUQ92729 1446 aa23.92■■□□□ 1.42
SLC12A4-216ENST00000576377 RIMS2Q9UQ26 1411 aa23.92■■□□□ 1.42
SLC12A4-216ENST00000576377 LAMC1P11047 1609 aa23.92■■□□□ 1.42
SLC12A4-216ENST00000576377 BAG6P46379 1132 aa23.91■■□□□ 1.42
SLC12A4-216ENST00000576377 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.91■■□□□ 1.423e-10■□□□□ 9.6
SLC12A4-216ENST00000576377 EHBP1L1Q8N3D4 1523 aa23.9■■□□□ 1.42
SLC12A4-216ENST00000576377 MYOM2P54296 1465 aa23.9■■□□□ 1.42
SLC12A4-216ENST00000576377 CEP162Q5TB80 1403 aa23.9■■□□□ 1.42
SLC12A4-216ENST00000576377 NOS1P29475 1434 aa23.87■■□□□ 1.41
SLC12A4-216ENST00000576377 UTRNP46939 3433 aa23.87■■□□□ 1.41
SLC12A4-216ENST00000576377 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
SLC12A4-216ENST00000576377 EN1Q05925 392 aaPredicted RBP23.86■■□□□ 1.41
SLC12A4-216ENST00000576377 SEPT12Q8IYM1 358 aa23.86■■□□□ 1.41
SLC12A4-216ENST00000576377 GCC2Q8IWJ2 1684 aa23.86■■□□□ 1.41
SLC12A4-216ENST00000576377 DUOX2Q9NRD8 1548 aa23.85■■□□□ 1.41
SLC12A4-216ENST00000576377 AMOTL2Q9Y2J4 779 aa23.85■■□□□ 1.41
SLC12A4-216ENST00000576377 SOS2Q07890 1332 aaPredicted RBP23.84■■□□□ 1.41
SLC12A4-216ENST00000576377 XRN1Q8IZH2 1706 aaKnown RBP23.82■■□□□ 1.4
SLC12A4-216ENST00000576377 NALCNQ8IZF0 1738 aa23.8■■□□□ 1.4
SLC12A4-216ENST00000576377 DCAF8L1A6NGE4 600 aa23.79■■□□□ 1.4
SLC12A4-216ENST00000576377 C1orf167Q5SNV9 1468 aa23.79■■□□□ 1.4
SLC12A4-216ENST00000576377 LMTK2Q8IWU2 1503 aa23.79■■□□□ 1.4
SLC12A4-216ENST00000576377 TMEM131LA2VDJ0 1609 aa23.78■■□□□ 1.4
SLC12A4-216ENST00000576377 KRT27Q7Z3Y8 459 aa23.78■■□□□ 1.4
SLC12A4-216ENST00000576377 RGPD1P0DJD0 1748 aa23.77■■□□□ 1.4
SLC12A4-216ENST00000576377 UNC5CLQ8IV45 518 aa23.77■■□□□ 1.4
SLC12A4-216ENST00000576377 SLIT2O94813 1529 aa23.77■■□□□ 1.4
SLC12A4-216ENST00000576377 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
SLC12A4-216ENST00000576377 SLC52A1Q9NWF4 448 aa23.75■■□□□ 1.39
SLC12A4-216ENST00000576377 NINLQ9Y2I6 1382 aa23.74■■□□□ 1.39
SLC12A4-216ENST00000576377 TNS1Q9HBL0 1735 aaKnown RBP23.73■■□□□ 1.39
SLC12A4-216ENST00000576377 ERBINQ96RT1 1412 aa23.72■■□□□ 1.39
SLC12A4-216ENST00000576377 HDGFP51858 240 aaKnown RBP23.71■■□□□ 1.39
SLC12A4-216ENST00000576377 ORAI2Q96SN7 254 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms