RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 PPP1R15AO75807 674 aaPredicted RBP30.78■■■□□ 2.52
HCFC1R1-208ENST00000575214 HDGFP51858 240 aaKnown RBP30.78■■■□□ 2.52
HCFC1R1-208ENST00000575214 FOXD1Q16676 465 aa30.77■■■□□ 2.52
HCFC1R1-208ENST00000575214 CLTCL1P53675 1640 aa30.75■■■□□ 2.51
HCFC1R1-208ENST00000575214 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.74■■■□□ 2.51
HCFC1R1-208ENST00000575214 BCANQ96GW7 911 aa30.74■■■□□ 2.51
HCFC1R1-208ENST00000575214 ZNF326Q5BKZ1 582 aaKnown RBP30.71■■■□□ 2.51
HCFC1R1-208ENST00000575214 NUTM2DQ5VT03 806 aaPredicted RBP30.71■■■□□ 2.51
HCFC1R1-208ENST00000575214 SENP3Q9H4L4 574 aaPredicted RBP30.71■■■□□ 2.51
HCFC1R1-208ENST00000575214 CPS1P31327 1500 aa30.7■■■□□ 2.51
HCFC1R1-208ENST00000575214 PLEKHG1Q9ULL1 1385 aa30.69■■■□□ 2.5
HCFC1R1-208ENST00000575214 SLC26A8Q96RN1 970 aa30.68■■■□□ 2.5
HCFC1R1-208ENST00000575214 IQSEC2Q5JU85 1478 aa30.68■■■□□ 2.5
HCFC1R1-208ENST00000575214 KIF1BO60333 1816 aa30.63■■■□□ 2.49
HCFC1R1-208ENST00000575214 HRCP23327 699 aa30.63■■■□□ 2.49
HCFC1R1-208ENST00000575214 CCDC144AA2RUR9 1427 aa30.62■■■□□ 2.49
HCFC1R1-208ENST00000575214 STRCP1A6NGW2 1772 aa30.59■■■□□ 2.49
HCFC1R1-208ENST00000575214 NEXMIFQ5QGS0 1516 aa30.55■■■□□ 2.48
HCFC1R1-208ENST00000575214 LRRC7Q96NW7 1537 aa30.54■■■□□ 2.48
HCFC1R1-208ENST00000575214 KCNA6P17658 529 aa30.54■■■□□ 2.48
HCFC1R1-208ENST00000575214 TBX22Q9Y458 520 aa30.54■■■□□ 2.48
HCFC1R1-208ENST00000575214 ADAMTS13Q76LX8 1427 aa30.53■■■□□ 2.48
HCFC1R1-208ENST00000575214 UBAP1LF5GYI3 381 aa30.52■■■□□ 2.48
HCFC1R1-208ENST00000575214 DIP2AQ14689 1571 aa30.51■■■□□ 2.47
HCFC1R1-208ENST00000575214 RPGRIP1LQ68CZ1 1315 aa30.5■■■□□ 2.47
HCFC1R1-208ENST00000575214 VGFO15240 615 aaPredicted RBP30.47■■■□□ 2.47
HCFC1R1-208ENST00000575214 RGL3Q3MIN7 710 aa30.47■■■□□ 2.47
HCFC1R1-208ENST00000575214 SETBP1Q9Y6X0 1596 aa30.47■■■□□ 2.47
HCFC1R1-208ENST00000575214 NWD1Q149M9 1564 aa30.46■■■□□ 2.47
HCFC1R1-208ENST00000575214 SPATA31E1Q6ZUB1 1445 aa30.46■■■□□ 2.47
HCFC1R1-208ENST00000575214 NKTRP30414 1462 aaKnown RBP30.44■■■□□ 2.46
HCFC1R1-208ENST00000575214 NRXN3Q9Y4C0 1643 aa30.43■■■□□ 2.46
HCFC1R1-208ENST00000575214 PROSER2Q86WR7 435 aaPredicted RBP30.43■■■□□ 2.46
HCFC1R1-208ENST00000575214 PIK3R4Q99570 1358 aa30.43■■■□□ 2.46
HCFC1R1-208ENST00000575214 ANKRD30BQ9BXX2 1392 aa30.42■■■□□ 2.46
HCFC1R1-208ENST00000575214 TOM1O60784 492 aa30.41■■■□□ 2.46
HCFC1R1-208ENST00000575214 TMEM94Q12767 1356 aa30.41■■■□□ 2.46
HCFC1R1-208ENST00000575214 CHD2O14647 1828 aaKnown RBP30.4■■■□□ 2.46
HCFC1R1-208ENST00000575214 PPLO60437 1756 aa30.39■■■□□ 2.46
HCFC1R1-208ENST00000575214 TRIM26Q12899 539 aaPredicted RBP30.38■■■□□ 2.45
HCFC1R1-208ENST00000575214 RBM33Q96EV2 1170 aaKnown RBP30.38■■■□□ 2.45
HCFC1R1-208ENST00000575214 SCAF1Q9H7N4 1312 aaKnown RBP30.36■■■□□ 2.45
HCFC1R1-208ENST00000575214 PIP4K2BP78356 416 aa30.35■■■□□ 2.45
HCFC1R1-208ENST00000575214 AMOTL2Q9Y2J4 779 aa30.35■■■□□ 2.45
HCFC1R1-208ENST00000575214 PTPRUQ92729 1446 aa30.35■■■□□ 2.45
HCFC1R1-208ENST00000575214 METP08581 1390 aa30.34■■■□□ 2.45
HCFC1R1-208ENST00000575214 XIRP1Q702N8 1843 aaKnown RBP30.33■■■□□ 2.45
HCFC1R1-208ENST00000575214 ADGRF5Q8IZF2 1346 aa30.32■■■□□ 2.44
HCFC1R1-208ENST00000575214 ALKQ9UM73 1620 aa30.29■■■□□ 2.44
HCFC1R1-208ENST00000575214 IFT172Q9UG01 1749 aa30.29■■■□□ 2.44
HCFC1R1-208ENST00000575214 MSH6P52701 1360 aa30.26■■■□□ 2.43
HCFC1R1-208ENST00000575214 C14orf37Q86TY3 774 aa30.26■■■□□ 2.43
HCFC1R1-208ENST00000575214 XRN1Q8IZH2 1706 aaKnown RBP30.25■■■□□ 2.43
HCFC1R1-208ENST00000575214 NCOA3Q9Y6Q9 1424 aa30.23■■■□□ 2.43
HCFC1R1-208ENST00000575214 SETD1AO15047 1707 aaKnown RBP30.23■■■□□ 2.43
HCFC1R1-208ENST00000575214 PIK3C2GO75747 1445 aa30.22■■■□□ 2.43
HCFC1R1-208ENST00000575214 MYOM2P54296 1465 aa30.21■■■□□ 2.43
HCFC1R1-208ENST00000575214 NRXN1Q9ULB1 1477 aa30.15■■■□□ 2.42
HCFC1R1-208ENST00000575214 DCAF11Q8TEB1 546 aa30.15■■■□□ 2.42
HCFC1R1-208ENST00000575214 C19orf44Q9H6X5 657 aa30.15■■■□□ 2.42
HCFC1R1-208ENST00000575214 KDM2AQ9Y2K7 1162 aa30.15■■■□□ 2.42
HCFC1R1-208ENST00000575214 PTCH1Q13635 1447 aa30.13■■■□□ 2.41
HCFC1R1-208ENST00000575214 HSPA1LP34931 641 aa30.13■■■□□ 2.41
HCFC1R1-208ENST00000575214 ATF3P18847 181 aa30.11■■■□□ 2.41
HCFC1R1-208ENST00000575214 ROBO2Q9HCK4 1378 aa30.1■■■□□ 2.41
HCFC1R1-208ENST00000575214 TMEM132EQ6IEE7 984 aa30.1■■■□□ 2.41
HCFC1R1-208ENST00000575214 C14orf93Q9H972 538 aaKnown RBP30.1■■■□□ 2.41
HCFC1R1-208ENST00000575214 DHX57Q6P158 1386 aaKnown RBP30.09■■■□□ 2.41
HCFC1R1-208ENST00000575214 PRAG1Q86YV5 1406 aa30.09■■■□□ 2.41
HCFC1R1-208ENST00000575214 CFAP70Q5T0N1 1121 aa30.09■■■□□ 2.41
HCFC1R1-208ENST00000575214 CADPS2Q86UW7 1296 aa30.09■■■□□ 2.41
HCFC1R1-208ENST00000575214 STK26Q9P289 416 aa30.09■■■□□ 2.41
HCFC1R1-208ENST00000575214 ASXL1Q8IXJ9 1541 aa30.09■■■□□ 2.41
HCFC1R1-208ENST00000575214 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.08■■■□□ 2.41
HCFC1R1-208ENST00000575214 STAC3Q96MF2 364 aa30.08■■■□□ 2.41
HCFC1R1-208ENST00000575214 SLAIN2Q9P270 581 aa30.08■■■□□ 2.41
HCFC1R1-208ENST00000575214 FAM135BQ49AJ0 1406 aa30.08■■■□□ 2.41
HCFC1R1-208ENST00000575214 LRPPRCP42704 1394 aaKnown RBP30.07■■■□□ 2.4
HCFC1R1-208ENST00000575214 ADGRL3Q9HAR2 1447 aa30.06■■■□□ 2.4
HCFC1R1-208ENST00000575214 LAMC1P11047 1609 aa30.06■■■□□ 2.4
HCFC1R1-208ENST00000575214 DCCP43146 1447 aa30.05■■■□□ 2.4
HCFC1R1-208ENST00000575214 YTHDC2Q9H6S0 1430 aaKnown RBP30.03■■■□□ 2.4
HCFC1R1-208ENST00000575214 TECPR2O15040 1411 aa30.02■■■□□ 2.4
HCFC1R1-208ENST00000575214 ABCC11Q96J66 1382 aa30.02■■■□□ 2.4
HCFC1R1-208ENST00000575214 SIN3AQ96ST3 1273 aa30.02■■■□□ 2.4
HCFC1R1-208ENST00000575214 ROBO1Q9Y6N7 1651 aa30.01■■■□□ 2.39
HCFC1R1-208ENST00000575214 NALCNQ8IZF0 1738 aa30■■■□□ 2.39
HCFC1R1-208ENST00000575214 NEUROD1Q13562 356 aa29.99■■■□□ 2.39
HCFC1R1-208ENST00000575214 KNDC1Q76NI1 1749 aa29.96■■■□□ 2.39
HCFC1R1-208ENST00000575214 WAPLQ7Z5K2 1190 aa29.96■■■□□ 2.39
HCFC1R1-208ENST00000575214 DISP3Q9P2K9 1392 aa29.94■■■□□ 2.38
HCFC1R1-208ENST00000575214 MST1RQ04912 1400 aa29.93■■■□□ 2.38
HCFC1R1-208ENST00000575214 PLEKHH1Q9ULM0 1364 aa29.92■■■□□ 2.38
HCFC1R1-208ENST00000575214 ADGRB1O14514 1584 aa29.92■■■□□ 2.38
HCFC1R1-208ENST00000575214 PCGF6Q9BYE7 350 aa29.91■■■□□ 2.38
HCFC1R1-208ENST00000575214 L3MBTL2Q969R5 705 aa29.9■■■□□ 2.38
HCFC1R1-208ENST00000575214 SIRT1Q96EB6 747 aa29.9■■■□□ 2.38
HCFC1R1-208ENST00000575214 BRINP3Q76B58 766 aa29.89■■■□□ 2.37
HCFC1R1-208ENST00000575214 TRAK1Q9UPV9 953 aa29.87■■■□□ 2.37
HCFC1R1-208ENST00000575214 PRAM1Q96QH2 718 aa29.86■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms