RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 NEURL4Q96JN8 1562 aa23.82■■□□□ 1.4
PFN1-203ENST00000574872 SENP3Q9H4L4 574 aaPredicted RBP23.81■■□□□ 1.4
PFN1-203ENST00000574872 ZFYVE9O95405 1425 aa23.81■■□□□ 1.4
PFN1-203ENST00000574872 PPP1R15AO75807 674 aaPredicted RBP23.79■■□□□ 1.4
PFN1-203ENST00000574872 NPHP4O75161 1426 aaPredicted RBP23.78■■□□□ 1.4
PFN1-203ENST00000574872 RGL3Q3MIN7 710 aa23.78■■□□□ 1.4
PFN1-203ENST00000574872 DMRT2Q9Y5R5 561 aa23.78■■□□□ 1.4
PFN1-203ENST00000574872 SPATA31E1Q6ZUB1 1445 aa23.76■■□□□ 1.39
PFN1-203ENST00000574872 MED14O60244 1454 aa23.75■■□□□ 1.39
PFN1-203ENST00000574872 HDGFP51858 240 aaKnown RBP23.74■■□□□ 1.39
PFN1-203ENST00000574872 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.74■■□□□ 1.39
PFN1-203ENST00000574872 NEXMIFQ5QGS0 1516 aa23.74■■□□□ 1.39
PFN1-203ENST00000574872 IQGAP1P46940 1657 aa23.73■■□□□ 1.39
PFN1-203ENST00000574872 BCANQ96GW7 911 aa23.73■■□□□ 1.39
PFN1-203ENST00000574872 PLEKHG1Q9ULL1 1385 aa23.69■■□□□ 1.38
PFN1-203ENST00000574872 SIN3AQ96ST3 1273 aa23.69■■□□□ 1.38
PFN1-203ENST00000574872 RPGRIP1LQ68CZ1 1315 aa23.68■■□□□ 1.38
PFN1-203ENST00000574872 SLC26A8Q96RN1 970 aa23.67■■□□□ 1.38
PFN1-203ENST00000574872 PPLO60437 1756 aa23.66■■□□□ 1.38
PFN1-203ENST00000574872 NEUROD1Q13562 356 aa23.66■■□□□ 1.38
PFN1-203ENST00000574872 VGFO15240 615 aaPredicted RBP23.64■■□□□ 1.37
PFN1-203ENST00000574872 ZNF335Q9H4Z2 1342 aaPredicted RBP23.63■■□□□ 1.37
PFN1-203ENST00000574872 IFT172Q9UG01 1749 aa23.62■■□□□ 1.37
PFN1-203ENST00000574872 ADGRF5Q8IZF2 1346 aa23.61■■□□□ 1.37
PFN1-203ENST00000574872 ADAMTS13Q76LX8 1427 aa23.6■■□□□ 1.37
PFN1-203ENST00000574872 NRXN3Q9Y4C0 1643 aa23.59■■□□□ 1.37
PFN1-203ENST00000574872 KDM2AQ9Y2K7 1162 aa23.59■■□□□ 1.37
PFN1-203ENST00000574872 SETBP1Q9Y6X0 1596 aa23.59■■□□□ 1.37
PFN1-203ENST00000574872 DCAF11Q8TEB1 546 aa23.58■■□□□ 1.37
PFN1-203ENST00000574872 CCER1Q8TC90 406 aaPredicted RBP23.56■■□□□ 1.36
PFN1-203ENST00000574872 MYOM2P54296 1465 aa23.56■■□□□ 1.36
PFN1-203ENST00000574872 TBX22Q9Y458 520 aa23.55■■□□□ 1.36
PFN1-203ENST00000574872 DIP2AQ14689 1571 aa23.55■■□□□ 1.36
PFN1-203ENST00000574872 LTBP4Q8N2S1 1624 aa23.52■■□□□ 1.36
PFN1-203ENST00000574872 PIK3C2GO75747 1445 aa23.52■■□□□ 1.36
PFN1-203ENST00000574872 L3MBTL2Q969R5 705 aa23.51■■□□□ 1.35
PFN1-203ENST00000574872 ALKQ9UM73 1620 aa23.51■■□□□ 1.35
PFN1-203ENST00000574872 METP08581 1390 aa23.51■■□□□ 1.35
PFN1-203ENST00000574872 NRXN1Q9ULB1 1477 aa23.5■■□□□ 1.35
PFN1-203ENST00000574872 STRCP1A6NGW2 1772 aa23.5■■□□□ 1.35
PFN1-203ENST00000574872 KCNA6P17658 529 aa23.48■■□□□ 1.35
PFN1-203ENST00000574872 TONSLQ96HA7 1378 aa23.48■■□□□ 1.35
PFN1-203ENST00000574872 PTPRUQ92729 1446 aa23.47■■□□□ 1.35
PFN1-203ENST00000574872 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
PFN1-203ENST00000574872 CFAP70Q5T0N1 1121 aa23.46■■□□□ 1.35
PFN1-203ENST00000574872 NWD1Q149M9 1564 aa23.45■■□□□ 1.34
PFN1-203ENST00000574872 CPS1P31327 1500 aa23.45■■□□□ 1.34
PFN1-203ENST00000574872 PIK3R4Q99570 1358 aa23.45■■□□□ 1.34
PFN1-203ENST00000574872 CLSPNQ9HAW4 1339 aa23.45■■□□□ 1.34
PFN1-203ENST00000574872 STAC3Q96MF2 364 aa23.44■■□□□ 1.34
PFN1-203ENST00000574872 CHD2O14647 1828 aaKnown RBP23.44■■□□□ 1.34
PFN1-203ENST00000574872 TMEM132EQ6IEE7 984 aa23.43■■□□□ 1.34
PFN1-203ENST00000574872 CERKQ8TCT0 537 aa23.43■■□□□ 1.34
PFN1-203ENST00000574872 C14orf93Q9H972 538 aaKnown RBP23.43■■□□□ 1.34
PFN1-203ENST00000574872 AMOTL2Q9Y2J4 779 aa23.43■■□□□ 1.34
PFN1-203ENST00000574872 RBM33Q96EV2 1170 aaKnown RBP23.41■■□□□ 1.34
PFN1-203ENST00000574872 ASXL1Q8IXJ9 1541 aa23.41■■□□□ 1.34
PFN1-203ENST00000574872 PRAG1Q86YV5 1406 aa23.41■■□□□ 1.34
PFN1-203ENST00000574872 LRRC7Q96NW7 1537 aa23.4■■□□□ 1.34
PFN1-203ENST00000574872 NKTRP30414 1462 aaKnown RBP23.4■■□□□ 1.34
PFN1-203ENST00000574872 PROSER2Q86WR7 435 aaPredicted RBP23.39■■□□□ 1.33
PFN1-203ENST00000574872 LAMC1P11047 1609 aa23.39■■□□□ 1.33
PFN1-203ENST00000574872 XRN1Q8IZH2 1706 aaKnown RBP23.39■■□□□ 1.33
PFN1-203ENST00000574872 STK26Q9P289 416 aa23.38■■□□□ 1.33
PFN1-203ENST00000574872 TMEM94Q12767 1356 aa23.37■■□□□ 1.33
PFN1-203ENST00000574872 LRPPRCP42704 1394 aaKnown RBP23.34■■□□□ 1.33
PFN1-203ENST00000574872 YTHDC2Q9H6S0 1430 aaKnown RBP23.33■■□□□ 1.33
PFN1-203ENST00000574872 ADGRB1O14514 1584 aa23.33■■□□□ 1.33
PFN1-203ENST00000574872 ROBO2Q9HCK4 1378 aa23.32■■□□□ 1.32
PFN1-203ENST00000574872 NBPF8Q3BBV2 869 aa23.32■■□□□ 1.32
PFN1-203ENST00000574872 NBPF1Q3BBV0 1214 aa23.31■■□□□ 1.32
PFN1-203ENST00000574872 C14orf37Q86TY3 774 aa23.3■■□□□ 1.32
PFN1-203ENST00000574872 XIRP1Q702N8 1843 aaKnown RBP23.3■■□□□ 1.32
PFN1-203ENST00000574872 PTCH1Q13635 1447 aa23.3■■□□□ 1.32
PFN1-203ENST00000574872 IQSEC2Q5JU85 1478 aa23.29■■□□□ 1.32
PFN1-203ENST00000574872 ABCC11Q96J66 1382 aa23.28■■□□□ 1.32
PFN1-203ENST00000574872 KIAA1210Q9ULL0 1709 aa23.28■■□□□ 1.32
PFN1-203ENST00000574872 TECPR2O15040 1411 aa23.27■■□□□ 1.32
PFN1-203ENST00000574872 TRAK1Q9UPV9 953 aa23.27■■□□□ 1.32
PFN1-203ENST00000574872 TRPM1Q7Z4N2 1603 aa23.26■■□□□ 1.31
PFN1-203ENST00000574872 KNDC1Q76NI1 1749 aa23.26■■□□□ 1.31
PFN1-203ENST00000574872 WAPLQ7Z5K2 1190 aa23.25■■□□□ 1.31
PFN1-203ENST00000574872 PLEKHH1Q9ULM0 1364 aa23.25■■□□□ 1.31
PFN1-203ENST00000574872 TIMELESSQ9UNS1 1208 aa23.24■■□□□ 1.31
PFN1-203ENST00000574872 ROCK2O75116 1388 aaKnown RBP23.24■■□□□ 1.31
PFN1-203ENST00000574872 UBAP1LF5GYI3 381 aa23.23■■□□□ 1.31
PFN1-203ENST00000574872 MSH6P52701 1360 aa23.23■■□□□ 1.31
PFN1-203ENST00000574872 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.31
PFN1-203ENST00000574872 PRAM1Q96QH2 718 aa23.21■■□□□ 1.31
PFN1-203ENST00000574872 NCOA3Q9Y6Q9 1424 aa23.21■■□□□ 1.31
PFN1-203ENST00000574872 DLC1Q96QB1 1528 aa23.2■■□□□ 1.3
PFN1-203ENST00000574872 RALGAPBQ86X10 1494 aa23.19■■□□□ 1.3
PFN1-203ENST00000574872 FAM135BQ49AJ0 1406 aa23.19■■□□□ 1.3
PFN1-203ENST00000574872 ADGRL3Q9HAR2 1447 aa23.19■■□□□ 1.3
PFN1-203ENST00000574872 POGKQ9P215 609 aa23.19■■□□□ 1.3
PFN1-203ENST00000574872 NALCNQ8IZF0 1738 aa23.19■■□□□ 1.3
PFN1-203ENST00000574872 C19orf44Q9H6X5 657 aa23.18■■□□□ 1.3
PFN1-203ENST00000574872 SIRT1Q96EB6 747 aa23.17■■□□□ 1.3
PFN1-203ENST00000574872 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.16■■□□□ 1.3
PFN1-203ENST00000574872 TOM1O60784 492 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms