RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 FGD6Q6ZV73 1430 aa15.49■□□□□ 0.07
NCBP3-203ENST00000574379 C8orf37Q96NL8 207 aa15.48■□□□□ 0.07
NCBP3-203ENST00000574379 MAST1Q9Y2H9 1570 aa15.47■□□□□ 0.07
NCBP3-203ENST00000574379 HOXD11P31277 338 aaPredicted RBP15.46■□□□□ 0.07
NCBP3-203ENST00000574379 ERVK-7P63135 1459 aa15.46■□□□□ 0.06
NCBP3-203ENST00000574379 RTEL1-TNFRSF6BF6WH68 1400 aa15.45■□□□□ 0.06
NCBP3-203ENST00000574379 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
NCBP3-203ENST00000574379 SHPRHQ149N8 1683 aa15.44■□□□□ 0.06
NCBP3-203ENST00000574379 PRDM15P57071 1507 aaPredicted RBP15.44■□□□□ 0.06
NCBP3-203ENST00000574379 NGLY1Q96IV0 654 aa15.44■□□□□ 0.06
NCBP3-203ENST00000574379 CFAP65Q6ZU64 1925 aaKnown RBP15.44■□□□□ 0.06
NCBP3-203ENST00000574379 RSPH4AQ5TD94 716 aa15.43■□□□□ 0.06
NCBP3-203ENST00000574379 SLIT1O75093 1534 aa15.43■□□□□ 0.06
NCBP3-203ENST00000574379 ARHGAP23Q9P227 1491 aa15.41■□□□□ 0.06
NCBP3-203ENST00000574379 ABCC3O15438 1527 aa15.39■□□□□ 0.05
NCBP3-203ENST00000574379 NPM3O75607 178 aaKnown RBP15.39■□□□□ 0.05
NCBP3-203ENST00000574379 NKTRP30414 1462 aaKnown RBP15.39■□□□□ 0.05
NCBP3-203ENST00000574379 ABCC5O15440 1437 aa15.38■□□□□ 0.05
NCBP3-203ENST00000574379 DAPK1P53355 1430 aa15.37■□□□□ 0.05
NCBP3-203ENST00000574379 TMEM2Q9UHN6 1383 aa15.36■□□□□ 0.05
NCBP3-203ENST00000574379 KDM5AP29375 1690 aaKnown RBP15.36■□□□□ 0.05
NCBP3-203ENST00000574379 ATF3P18847 181 aa15.36■□□□□ 0.05
NCBP3-203ENST00000574379 PPARGC1BQ86YN6 1023 aaKnown RBP15.36■□□□□ 0.05
NCBP3-203ENST00000574379 ADAMTS2O95450 1211 aa15.35■□□□□ 0.05
NCBP3-203ENST00000574379 TSPY4P0CV99 314 aa15.35■□□□□ 0.05
NCBP3-203ENST00000574379 TSPY10P0CW01 314 aa15.35■□□□□ 0.05
NCBP3-203ENST00000574379 AHDC1Q5TGY3 1603 aaPredicted RBP15.35■□□□□ 0.05
NCBP3-203ENST00000574379 EIF2AK4Q9P2K8 1649 aaKnown RBP15.35■□□□□ 0.05
NCBP3-203ENST00000574379 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
NCBP3-203ENST00000574379 CCDC125Q86Z20 511 aa15.33■□□□□ 0.04
NCBP3-203ENST00000574379 CEP152O94986 1710 aa15.33■□□□□ 0.04
NCBP3-203ENST00000574379 PIK3C2BO00750 1634 aa15.32■□□□□ 0.04
NCBP3-203ENST00000574379 YY1P25490 414 aa15.32■□□□□ 0.04
NCBP3-203ENST00000574379 CADPS2Q86UW7 1296 aa15.32■□□□□ 0.04
NCBP3-203ENST00000574379 NWD1Q149M9 1564 aa15.32■□□□□ 0.04
NCBP3-203ENST00000574379 DUOX2Q9NRD8 1548 aa15.31■□□□□ 0.04
NCBP3-203ENST00000574379 ADGRL2O95490 1459 aa15.3■□□□□ 0.04
NCBP3-203ENST00000574379 FAM50AQ14320 339 aaKnown RBP15.3■□□□□ 0.04
NCBP3-203ENST00000574379 USP21Q9UK80 565 aa15.3■□□□□ 0.04
NCBP3-203ENST00000574379 DIP2AQ14689 1571 aa15.29■□□□□ 0.04
NCBP3-203ENST00000574379 EFCAB6Q5THR3 1501 aa15.29■□□□□ 0.04
NCBP3-203ENST00000574379 BRINP3Q76B58 766 aa15.29■□□□□ 0.04
NCBP3-203ENST00000574379 LRP5O75197 1615 aa15.28■□□□□ 0.04
NCBP3-203ENST00000574379 RRBP1Q9P2E9 1410 aaKnown RBP15.28■□□□□ 0.04
NCBP3-203ENST00000574379 PSDA5PKW4 1024 aaPredicted RBP15.28■□□□□ 0.04
NCBP3-203ENST00000574379 TRPC5Q9UL62 973 aaPredicted RBP15.28■□□□□ 0.04
NCBP3-203ENST00000574379 TET3O43151 1660 aa15.28■□□□□ 0.04
NCBP3-203ENST00000574379 MROH1Q8NDA8 1641 aa15.28■□□□□ 0.04
NCBP3-203ENST00000574379 EP400Q96L91 3159 aa15.27■□□□□ 0.04
NCBP3-203ENST00000574379 PPP1R15AO75807 674 aaPredicted RBP15.27■□□□□ 0.04
NCBP3-203ENST00000574379 SF3B2Q13435 895 aaKnown RBP15.27■□□□□ 0.04
NCBP3-203ENST00000574379 IFFO2Q5TF58 517 aa15.27■□□□□ 0.04
NCBP3-203ENST00000574379 LRRC59Q96AG4 307 aaKnown RBP15.27■□□□□ 0.04
NCBP3-203ENST00000574379 KIF15Q9NS87 1388 aa15.26■□□□□ 0.03
NCBP3-203ENST00000574379 DEFB132Q7Z7B7 95 aa15.26■□□□□ 0.03
NCBP3-203ENST00000574379 C19orf44Q9H6X5 657 aa15.26■□□□□ 0.03
NCBP3-203ENST00000574379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.033e-8■■■■□ 24.2
NCBP3-203ENST00000574379 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.25■□□□□ 0.03
NCBP3-203ENST00000574379 ERBINQ96RT1 1412 aa15.25■□□□□ 0.03
NCBP3-203ENST00000574379 ANKRD30AQ9BXX3 1397 aa15.24■□□□□ 0.03
NCBP3-203ENST00000574379 CHIC2Q9UKJ5 165 aa15.24■□□□□ 0.03
NCBP3-203ENST00000574379 IDI1Q13907 227 aa15.22■□□□□ 0.03
NCBP3-203ENST00000574379 DDX17Q92841 729 aaKnown RBP15.22■□□□□ 0.03
NCBP3-203ENST00000574379 RRP7BPQ9NSQ0 103 aa15.22■□□□□ 0.03
NCBP3-203ENST00000574379 SETD5Q9C0A6 1442 aa15.22■□□□□ 0.03
NCBP3-203ENST00000574379 CHD2O14647 1828 aaKnown RBP15.21■□□□□ 0.03
NCBP3-203ENST00000574379 ASXL1Q8IXJ9 1541 aa15.21■□□□□ 0.03
NCBP3-203ENST00000574379 PNPLA6Q8IY17 1366 aa15.21■□□□□ 0.02
NCBP3-203ENST00000574379 BLMP54132 1417 aaPredicted RBP15.19■□□□□ 0.02
NCBP3-203ENST00000574379 NCOA3Q9Y6Q9 1424 aa15.19■□□□□ 0.02
NCBP3-203ENST00000574379 ROCK1Q13464 1354 aa15.19■□□□□ 0.02
NCBP3-203ENST00000574379 HRCP23327 699 aa15.18■□□□□ 0.02
NCBP3-203ENST00000574379 GCC2Q8IWJ2 1684 aa15.18■□□□□ 0.02
NCBP3-203ENST00000574379 UNC13BO14795 1591 aa15.16■□□□□ 0.02
NCBP3-203ENST00000574379 SENP3-EIF4A1A0A087X0R7 540 aa15.16■□□□□ 0.02
NCBP3-203ENST00000574379 ARHGAP31Q2M1Z3 1444 aa15.16■□□□□ 0.02
NCBP3-203ENST00000574379 ANKRD50Q9ULJ7 1429 aa15.16■□□□□ 0.02
NCBP3-203ENST00000574379 NHSL1Q5SYE7 1610 aa15.14■□□□□ 0.01
NCBP3-203ENST00000574379 ADGRB3O60242 1522 aa15.14■□□□□ 0.01
NCBP3-203ENST00000574379 ITGAEP38570 1179 aa15.14■□□□□ 0.01
NCBP3-203ENST00000574379 HDGFP51858 240 aaKnown RBP15.14■□□□□ 0.01
NCBP3-203ENST00000574379 ATRNO75882 1429 aa15.14■□□□□ 0.01
NCBP3-203ENST00000574379 PLEKHG1Q9ULL1 1385 aa15.13■□□□□ 0.01
NCBP3-203ENST00000574379 LMTK2Q8IWU2 1503 aa15.12■□□□□ 0.01
NCBP3-203ENST00000574379 KANK1Q14678 1352 aa15.12■□□□□ 0.01
NCBP3-203ENST00000574379 CHGAP10645 457 aaKnown RBP15.11■□□□□ 0.01
NCBP3-203ENST00000574379 FNBP4Q8N3X1 1017 aaPredicted RBP15.11■□□□□ 0.01
NCBP3-203ENST00000574379 TBX22Q9Y458 520 aa15.11■□□□□ 0.01
NCBP3-203ENST00000574379 IQGAP3Q86VI3 1631 aa15.1■□□□□ 0.01
NCBP3-203ENST00000574379 GJD4Q96KN9 370 aaPredicted RBP15.1■□□□□ 0.01
NCBP3-203ENST00000574379 RIMS2Q9UQ26 1411 aa15.09■□□□□ 0.01
NCBP3-203ENST00000574379 AMOTL2Q9Y2J4 779 aa15.09■□□□□ 0.01
NCBP3-203ENST00000574379 R3HDM1Q15032 1099 aaKnown RBP15.08■□□□□ 0
NCBP3-203ENST00000574379 MST1RQ04912 1400 aa15.08■□□□□ 0
NCBP3-203ENST00000574379 BAG6P46379 1132 aa15.07■□□□□ 0
NCBP3-203ENST00000574379 NAIPQ13075 1403 aa15.07■□□□□ 0
NCBP3-203ENST00000574379 PTCH1Q13635 1447 aa15.07■□□□□ 0
NCBP3-203ENST00000574379 E9PCH4 1651 aa15.06■□□□□ 0
NCBP3-203ENST00000574379 SLC52A1Q9NWF4 448 aa15.05■□□□□ -0
NCBP3-203ENST00000574379 HFM1A2PYH4 1435 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms