RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 RAB3GAP2Q9H2M9 1393 aa14.6□□□□□ -0.07
NDE1-210ENST00000574163 SLC4A1APQ9BWU0 796 aaKnown RBP14.59□□□□□ -0.07
NDE1-210ENST00000574163 EID1Q9Y6B2 187 aa14.59□□□□□ -0.07
NDE1-210ENST00000574163 CPS1P31327 1500 aa14.58□□□□□ -0.08
NDE1-210ENST00000574163 RIMS2Q9UQ26 1411 aa14.57□□□□□ -0.08
NDE1-210ENST00000574163 DIP2AQ14689 1571 aa14.56□□□□□ -0.08
NDE1-210ENST00000574163 HRCP23327 699 aa14.56□□□□□ -0.08
NDE1-210ENST00000574163 LTKP29376 864 aa14.55□□□□□ -0.08
NDE1-210ENST00000574163 TXNDC2Q86VQ3 553 aa14.55□□□□□ -0.08
NDE1-210ENST00000574163 PLEKHG1Q9ULL1 1385 aa14.55□□□□□ -0.08
NDE1-210ENST00000574163 ZNF335Q9H4Z2 1342 aaPredicted RBP14.54□□□□□ -0.08
NDE1-210ENST00000574163 NWD1Q149M9 1564 aa14.53□□□□□ -0.08
NDE1-210ENST00000574163 NEXMIFQ5QGS0 1516 aa14.53□□□□□ -0.08
NDE1-210ENST00000574163 SCAF1Q9H7N4 1312 aaKnown RBP14.53□□□□□ -0.08
NDE1-210ENST00000574163 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.53□□□□□ -0.08
NDE1-210ENST00000574163 CERKQ8TCT0 537 aa14.53□□□□□ -0.08
NDE1-210ENST00000574163 MPHOSPH9Q99550 1183 aa14.53□□□□□ -0.08
NDE1-210ENST00000574163 STRCP1A6NGW2 1772 aa14.52□□□□□ -0.08
NDE1-210ENST00000574163 SETBP1Q9Y6X0 1596 aa14.52□□□□□ -0.08
NDE1-210ENST00000574163 CCDC144AA2RUR9 1427 aa14.52□□□□□ -0.08
NDE1-210ENST00000574163 HDGFP51858 240 aaKnown RBP14.52□□□□□ -0.09
NDE1-210ENST00000574163 NPM3O75607 178 aaKnown RBP14.51□□□□□ -0.09
NDE1-210ENST00000574163 PPLO60437 1756 aa14.5□□□□□ -0.09
NDE1-210ENST00000574163 CHGAP10645 457 aaKnown RBP14.5□□□□□ -0.09
NDE1-210ENST00000574163 NRXN3Q9Y4C0 1643 aa14.49□□□□□ -0.09
NDE1-210ENST00000574163 NKTRP30414 1462 aaKnown RBP14.49□□□□□ -0.09
NDE1-210ENST00000574163 IFT172Q9UG01 1749 aa14.49□□□□□ -0.09
NDE1-210ENST00000574163 PPP1R15AO75807 674 aaPredicted RBP14.48□□□□□ -0.09
NDE1-210ENST00000574163 FBXO41Q8TF61 875 aa14.48□□□□□ -0.09
NDE1-210ENST00000574163 SPATA31E1Q6ZUB1 1445 aa14.48□□□□□ -0.09
NDE1-210ENST00000574163 CNKSR2Q8WXI2 1034 aa14.47□□□□□ -0.09
NDE1-210ENST00000574163 CHD2O14647 1828 aaKnown RBP14.47□□□□□ -0.09
NDE1-210ENST00000574163 ADAMTS13Q76LX8 1427 aa14.47□□□□□ -0.09
NDE1-210ENST00000574163 PIK3R4Q99570 1358 aa14.47□□□□□ -0.09
NDE1-210ENST00000574163 RPGRIP1LQ68CZ1 1315 aa14.45□□□□□ -0.1
NDE1-210ENST00000574163 LRRC7Q96NW7 1537 aa14.45□□□□□ -0.1
NDE1-210ENST00000574163 ANKRD30BQ9BXX2 1392 aa14.44□□□□□ -0.1
NDE1-210ENST00000574163 SETD1AO15047 1707 aaKnown RBP14.44□□□□□ -0.1
NDE1-210ENST00000574163 XIRP1Q702N8 1843 aaKnown RBP14.43□□□□□ -0.1
NDE1-210ENST00000574163 ZNF326Q5BKZ1 582 aaKnown RBP14.43□□□□□ -0.1
NDE1-210ENST00000574163 XRN1Q8IZH2 1706 aaKnown RBP14.43□□□□□ -0.1
NDE1-210ENST00000574163 MAPK8IP2Q13387 824 aaPredicted RBP14.42□□□□□ -0.1
NDE1-210ENST00000574163 TBX22Q9Y458 520 aa14.42□□□□□ -0.1
NDE1-210ENST00000574163 SLC26A8Q96RN1 970 aa14.41□□□□□ -0.1
NDE1-210ENST00000574163 MYOM2P54296 1465 aa14.4□□□□□ -0.1
NDE1-210ENST00000574163 KCNA6P17658 529 aa14.4□□□□□ -0.1
NDE1-210ENST00000574163 ILDR1Q86SU0 546 aaPredicted RBP14.4□□□□□ -0.1
NDE1-210ENST00000574163 VGFO15240 615 aaPredicted RBP14.39□□□□□ -0.11
NDE1-210ENST00000574163 LAMC1P11047 1609 aa14.39□□□□□ -0.11
NDE1-210ENST00000574163 PRAG1Q86YV5 1406 aa14.39□□□□□ -0.11
NDE1-210ENST00000574163 ALKQ9UM73 1620 aa14.38□□□□□ -0.11
NDE1-210ENST00000574163 TRIM26Q12899 539 aaPredicted RBP14.38□□□□□ -0.11
NDE1-210ENST00000574163 BCANQ96GW7 911 aa14.38□□□□□ -0.11
NDE1-210ENST00000574163 NUTM2DQ5VT03 806 aaPredicted RBP14.37□□□□□ -0.11
NDE1-210ENST00000574163 NCOA3Q9Y6Q9 1424 aa14.37□□□□□ -0.11
NDE1-210ENST00000574163 NRXN1Q9ULB1 1477 aa14.37□□□□□ -0.11
NDE1-210ENST00000574163 PIK3C2GO75747 1445 aa14.36□□□□□ -0.11
NDE1-210ENST00000574163 TMEM94Q12767 1356 aa14.34□□□□□ -0.11
NDE1-210ENST00000574163 PTPRUQ92729 1446 aa14.34□□□□□ -0.11
NDE1-210ENST00000574163 PTCH1Q13635 1447 aa14.33□□□□□ -0.11
NDE1-210ENST00000574163 KNDC1Q76NI1 1749 aa14.33□□□□□ -0.12
NDE1-210ENST00000574163 METP08581 1390 aa14.33□□□□□ -0.12
NDE1-210ENST00000574163 UBAP1LF5GYI3 381 aa14.32□□□□□ -0.12
NDE1-210ENST00000574163 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
NDE1-210ENST00000574163 TOM1O60784 492 aa14.31□□□□□ -0.12
NDE1-210ENST00000574163 DCCP43146 1447 aa14.31□□□□□ -0.12
NDE1-210ENST00000574163 RGL3Q3MIN7 710 aa14.3□□□□□ -0.12
NDE1-210ENST00000574163 PROSER2Q86WR7 435 aaPredicted RBP14.3□□□□□ -0.12
NDE1-210ENST00000574163 STAC3Q96MF2 364 aa14.3□□□□□ -0.12
NDE1-210ENST00000574163 ADGRF5Q8IZF2 1346 aa14.3□□□□□ -0.12
NDE1-210ENST00000574163 MSH6P52701 1360 aa14.29□□□□□ -0.12
NDE1-210ENST00000574163 TECPR2O15040 1411 aa14.29□□□□□ -0.12
NDE1-210ENST00000574163 DHX57Q6P158 1386 aaKnown RBP14.28□□□□□ -0.12
NDE1-210ENST00000574163 NALCNQ8IZF0 1738 aa14.28□□□□□ -0.12
NDE1-210ENST00000574163 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.28□□□□□ -0.12
NDE1-210ENST00000574163 AMOTL2Q9Y2J4 779 aa14.28□□□□□ -0.12
NDE1-210ENST00000574163 ADGRL3Q9HAR2 1447 aa14.27□□□□□ -0.12
NDE1-210ENST00000574163 KIAA1210Q9ULL0 1709 aa14.27□□□□□ -0.13
NDE1-210ENST00000574163 LRPPRCP42704 1394 aaKnown RBP14.25□□□□□ -0.13
NDE1-210ENST00000574163 ADGRB1O14514 1584 aa14.24□□□□□ -0.13
NDE1-210ENST00000574163 ROBO1Q9Y6N7 1651 aa14.23□□□□□ -0.13
NDE1-210ENST00000574163 CDC42BPGQ6DT37 1551 aa14.23□□□□□ -0.13
NDE1-210ENST00000574163 DLC1Q96QB1 1528 aa14.23□□□□□ -0.13
NDE1-210ENST00000574163 FAM135BQ49AJ0 1406 aa14.23□□□□□ -0.13
NDE1-210ENST00000574163 YTHDC2Q9H6S0 1430 aaKnown RBP14.23□□□□□ -0.13
NDE1-210ENST00000574163 ABCC11Q96J66 1382 aa14.22□□□□□ -0.13
NDE1-210ENST00000574163 ROBO2Q9HCK4 1378 aa14.22□□□□□ -0.13
NDE1-210ENST00000574163 C14orf93Q9H972 538 aaKnown RBP14.22□□□□□ -0.13
NDE1-210ENST00000574163 C19orf44Q9H6X5 657 aa14.21□□□□□ -0.13
NDE1-210ENST00000574163 CADPS2Q86UW7 1296 aa14.2□□□□□ -0.14
NDE1-210ENST00000574163 PIP4K2BP78356 416 aa14.19□□□□□ -0.14
NDE1-210ENST00000574163 C14orf37Q86TY3 774 aa14.19□□□□□ -0.14
NDE1-210ENST00000574163 DCAF11Q8TEB1 546 aa14.19□□□□□ -0.14
NDE1-210ENST00000574163 RBM33Q96EV2 1170 aaKnown RBP14.19□□□□□ -0.14
NDE1-210ENST00000574163 AHDC1Q5TGY3 1603 aaPredicted RBP14.18□□□□□ -0.14
NDE1-210ENST00000574163 ADGRB2O60241 1585 aa14.17□□□□□ -0.14
NDE1-210ENST00000574163 MST1RQ04912 1400 aa14.17□□□□□ -0.14
NDE1-210ENST00000574163 ATF3P18847 181 aa14.17□□□□□ -0.14
NDE1-210ENST00000574163 SIRT1Q96EB6 747 aa14.17□□□□□ -0.14
NDE1-210ENST00000574163 ARHGEF28Q8N1W1 1705 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms