RNA–Protein interactions for RNA: ENST00000573745.1

CLDN7-206, Transcript of claudin 7, humanhuman

TSL 2

Gene CLDN7, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN7-206ENST00000573745 SCAF11Q99590 1463 aaKnown RBP23.26■■□□□ 1.31
CLDN7-206ENST00000573745 VGFO15240 615 aaPredicted RBP23.25■■□□□ 1.31
CLDN7-206ENST00000573745 NPHP4O75161 1426 aaPredicted RBP23.25■■□□□ 1.31
CLDN7-206ENST00000573745 STRCQ7RTU9 1775 aa23.24■■□□□ 1.31
CLDN7-206ENST00000573745 MED14O60244 1454 aa23.24■■□□□ 1.31
CLDN7-206ENST00000573745 CLTCL1P53675 1640 aa23.24■■□□□ 1.31
CLDN7-206ENST00000573745 DHX57Q6P158 1386 aaKnown RBP23.24■■□□□ 1.31
CLDN7-206ENST00000573745 ZFYVE9O95405 1425 aa23.23■■□□□ 1.31
CLDN7-206ENST00000573745 SPATA31E1Q6ZUB1 1445 aa23.19■■□□□ 1.3
CLDN7-206ENST00000573745 SLC26A8Q96RN1 970 aa23.19■■□□□ 1.3
CLDN7-206ENST00000573745 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
CLDN7-206ENST00000573745 PLEKHG1Q9ULL1 1385 aa23.18■■□□□ 1.3
CLDN7-206ENST00000573745 SIN3AQ96ST3 1273 aa23.17■■□□□ 1.3
CLDN7-206ENST00000573745 TBX22Q9Y458 520 aa23.17■■□□□ 1.3
CLDN7-206ENST00000573745 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.3
CLDN7-206ENST00000573745 NEUROD1Q13562 356 aa23.14■■□□□ 1.29
CLDN7-206ENST00000573745 STAC3Q96MF2 364 aa23.13■■□□□ 1.29
CLDN7-206ENST00000573745 KIF1BO60333 1816 aa23.12■■□□□ 1.29
CLDN7-206ENST00000573745 ZNF335Q9H4Z2 1342 aaPredicted RBP23.12■■□□□ 1.29
CLDN7-206ENST00000573745 DCAF11Q8TEB1 546 aa23.11■■□□□ 1.29
CLDN7-206ENST00000573745 ADGRF5Q8IZF2 1346 aa23.1■■□□□ 1.29
CLDN7-206ENST00000573745 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
CLDN7-206ENST00000573745 MYO5BQ9ULV0 1848 aa23.1■■□□□ 1.29
CLDN7-206ENST00000573745 NEXMIFQ5QGS0 1516 aa23.08■■□□□ 1.29
CLDN7-206ENST00000573745 POLR1AO95602 1720 aaPredicted RBP23.08■■□□□ 1.28
CLDN7-206ENST00000573745 KCNA6P17658 529 aa23.07■■□□□ 1.28
CLDN7-206ENST00000573745 IQGAP1P46940 1657 aa23.06■■□□□ 1.28
CLDN7-206ENST00000573745 ADAMTS13Q76LX8 1427 aa23.05■■□□□ 1.28
CLDN7-206ENST00000573745 CCER1Q8TC90 406 aaPredicted RBP23.03■■□□□ 1.28
CLDN7-206ENST00000573745 CERKQ8TCT0 537 aa23.03■■□□□ 1.28
CLDN7-206ENST00000573745 L3MBTL2Q969R5 705 aa23.03■■□□□ 1.28
CLDN7-206ENST00000573745 CLSPNQ9HAW4 1339 aa23.02■■□□□ 1.28
CLDN7-206ENST00000573745 C14orf93Q9H972 538 aaKnown RBP23.01■■□□□ 1.27
CLDN7-206ENST00000573745 PIK3R4Q99570 1358 aa23.01■■□□□ 1.27
CLDN7-206ENST00000573745 AMOTL2Q9Y2J4 779 aa23■■□□□ 1.27
CLDN7-206ENST00000573745 PROSER2Q86WR7 435 aaPredicted RBP22.98■■□□□ 1.27
CLDN7-206ENST00000573745 METP08581 1390 aa22.98■■□□□ 1.27
CLDN7-206ENST00000573745 CFAP70Q5T0N1 1121 aa22.97■■□□□ 1.27
CLDN7-206ENST00000573745 SETBP1Q9Y6X0 1596 aa22.97■■□□□ 1.27
CLDN7-206ENST00000573745 LTBP4Q8N2S1 1624 aa22.95■■□□□ 1.26
CLDN7-206ENST00000573745 MYOM2P54296 1465 aa22.94■■□□□ 1.26
CLDN7-206ENST00000573745 PPLO60437 1756 aa22.94■■□□□ 1.26
CLDN7-206ENST00000573745 PIK3C2GO75747 1445 aa22.93■■□□□ 1.26
CLDN7-206ENST00000573745 TMEM132EQ6IEE7 984 aa22.93■■□□□ 1.26
CLDN7-206ENST00000573745 NRXN1Q9ULB1 1477 aa22.92■■□□□ 1.26
CLDN7-206ENST00000573745 DIP2AQ14689 1571 aa22.92■■□□□ 1.26
CLDN7-206ENST00000573745 CPS1P31327 1500 aa22.92■■□□□ 1.26
CLDN7-206ENST00000573745 TONSLQ96HA7 1378 aa22.91■■□□□ 1.26
CLDN7-206ENST00000573745 PTPRUQ92729 1446 aa22.91■■□□□ 1.26
CLDN7-206ENST00000573745 ALKQ9UM73 1620 aa22.9■■□□□ 1.26
CLDN7-206ENST00000573745 STK26Q9P289 416 aa22.89■■□□□ 1.25
CLDN7-206ENST00000573745 TIMELESSQ9UNS1 1208 aa22.89■■□□□ 1.25
CLDN7-206ENST00000573745 NRXN3Q9Y4C0 1643 aa22.89■■□□□ 1.25
CLDN7-206ENST00000573745 RBM33Q96EV2 1170 aaKnown RBP22.88■■□□□ 1.25
CLDN7-206ENST00000573745 LRRC7Q96NW7 1537 aa22.86■■□□□ 1.25
CLDN7-206ENST00000573745 TMEM94Q12767 1356 aa22.86■■□□□ 1.25
CLDN7-206ENST00000573745 IFT172Q9UG01 1749 aa22.85■■□□□ 1.25
CLDN7-206ENST00000573745 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
CLDN7-206ENST00000573745 SIRT1Q96EB6 747 aa22.83■■□□□ 1.25
CLDN7-206ENST00000573745 LRPPRCP42704 1394 aaKnown RBP22.83■■□□□ 1.25
CLDN7-206ENST00000573745 ABCC11Q96J66 1382 aa22.83■■□□□ 1.25
CLDN7-206ENST00000573745 NKTRP30414 1462 aaKnown RBP22.82■■□□□ 1.24
CLDN7-206ENST00000573745 PRAG1Q86YV5 1406 aa22.82■■□□□ 1.24
CLDN7-206ENST00000573745 NBPF1Q3BBV0 1214 aa22.81■■□□□ 1.24
CLDN7-206ENST00000573745 C19orf44Q9H6X5 657 aa22.81■■□□□ 1.24
CLDN7-206ENST00000573745 NCOA3Q9Y6Q9 1424 aa22.81■■□□□ 1.24
CLDN7-206ENST00000573745 IQSEC2Q5JU85 1478 aa22.8■■□□□ 1.24
CLDN7-206ENST00000573745 TOM1O60784 492 aa22.8■■□□□ 1.24
CLDN7-206ENST00000573745 NBPF8Q3BBV2 869 aa22.8■■□□□ 1.24
CLDN7-206ENST00000573745 CHD2O14647 1828 aaKnown RBP22.8■■□□□ 1.24
CLDN7-206ENST00000573745 NWD1Q149M9 1564 aa22.8■■□□□ 1.24
CLDN7-206ENST00000573745 STRCP1A6NGW2 1772 aa22.79■■□□□ 1.24
CLDN7-206ENST00000573745 UBAP1LF5GYI3 381 aa22.79■■□□□ 1.24
CLDN7-206ENST00000573745 YTHDC2Q9H6S0 1430 aaKnown RBP22.79■■□□□ 1.24
CLDN7-206ENST00000573745 ROBO2Q9HCK4 1378 aa22.78■■□□□ 1.24
CLDN7-206ENST00000573745 WAPLQ7Z5K2 1190 aa22.78■■□□□ 1.24
CLDN7-206ENST00000573745 FBXO41Q8TF61 875 aa22.78■■□□□ 1.24
CLDN7-206ENST00000573745 TRAK1Q9UPV9 953 aa22.78■■□□□ 1.24
CLDN7-206ENST00000573745 MSH6P52701 1360 aa22.75■■□□□ 1.23
CLDN7-206ENST00000573745 POGKQ9P215 609 aa22.74■■□□□ 1.23
CLDN7-206ENST00000573745 TECPR2O15040 1411 aa22.74■■□□□ 1.23
CLDN7-206ENST00000573745 PTCH1Q13635 1447 aa22.74■■□□□ 1.23
CLDN7-206ENST00000573745 ATF3P18847 181 aa22.73■■□□□ 1.23
CLDN7-206ENST00000573745 PRAM1Q96QH2 718 aa22.73■■□□□ 1.23
CLDN7-206ENST00000573745 SETD1AO15047 1707 aaKnown RBP22.72■■□□□ 1.23
CLDN7-206ENST00000573745 CADPS2Q86UW7 1296 aa22.72■■□□□ 1.23
CLDN7-206ENST00000573745 ASXL1Q8IXJ9 1541 aa22.71■■□□□ 1.23
CLDN7-206ENST00000573745 FAM135BQ49AJ0 1406 aa22.7■■□□□ 1.22
CLDN7-206ENST00000573745 ADGRB1O14514 1584 aa22.7■■□□□ 1.22
CLDN7-206ENST00000573745 LAMC1P11047 1609 aa22.7■■□□□ 1.22
CLDN7-206ENST00000573745 XRN1Q8IZH2 1706 aaKnown RBP22.7■■□□□ 1.22
CLDN7-206ENST00000573745 ROCK2O75116 1388 aaKnown RBP22.69■■□□□ 1.22
CLDN7-206ENST00000573745 SLAIN2Q9P270 581 aa22.69■■□□□ 1.22
CLDN7-206ENST00000573745 PIP4K2BP78356 416 aa22.68■■□□□ 1.22
CLDN7-206ENST00000573745 SAFB2Q14151 953 aaKnown RBP eCLIP22.68■■□□□ 1.22
CLDN7-206ENST00000573745 PLEKHH1Q9ULM0 1364 aa22.67■■□□□ 1.22
CLDN7-206ENST00000573745 CARD11Q9BXL7 1154 aa22.67■■□□□ 1.22
CLDN7-206ENST00000573745 SCAF1Q9H7N4 1312 aaKnown RBP22.65■■□□□ 1.22
CLDN7-206ENST00000573745 ADGRL3Q9HAR2 1447 aa22.64■■□□□ 1.21
CLDN7-206ENST00000573745 DLC1Q96QB1 1528 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms