RNA–Protein interactions for RNA: ENST00000572965.1

RPH3AL-209, Transcript of rabphilin 3A like (without C2 domains), humanhuman

TSL 2

Gene RPH3AL, Length 880 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AL-209ENST00000572965 RIMS2Q9UQ26 1411 aa27.58■■■□□ 2.01
RPH3AL-209ENST00000572965 BCANQ96GW7 911 aa27.56■■■□□ 2
RPH3AL-209ENST00000572965 NPHP4O75161 1426 aaPredicted RBP27.55■■■□□ 2
RPH3AL-209ENST00000572965 LTKP29376 864 aa27.54■■■□□ 2
RPH3AL-209ENST00000572965 MED14O60244 1454 aa27.52■■■□□ 2
RPH3AL-209ENST00000572965 ZFYVE9O95405 1425 aa27.52■■■□□ 2
RPH3AL-209ENST00000572965 DHX57Q6P158 1386 aaKnown RBP27.52■■■□□ 2
RPH3AL-209ENST00000572965 RPGRIP1LQ68CZ1 1315 aa27.52■■■□□ 2
RPH3AL-209ENST00000572965 NEURL4Q96JN8 1562 aa27.52■■■□□ 2
RPH3AL-209ENST00000572965 RGL3Q3MIN7 710 aa27.51■■□□□ 1.99
RPH3AL-209ENST00000572965 IQGAP1P46940 1657 aa27.49■■□□□ 1.99
RPH3AL-209ENST00000572965 NUTM2DQ5VT03 806 aaPredicted RBP27.48■■□□□ 1.99
RPH3AL-209ENST00000572965 VGFO15240 615 aaPredicted RBP27.46■■□□□ 1.99
RPH3AL-209ENST00000572965 SPATA31E1Q6ZUB1 1445 aa27.46■■□□□ 1.99
RPH3AL-209ENST00000572965 PLEKHG1Q9ULL1 1385 aa27.46■■□□□ 1.99
RPH3AL-209ENST00000572965 NEXMIFQ5QGS0 1516 aa27.43■■□□□ 1.98
RPH3AL-209ENST00000572965 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
RPH3AL-209ENST00000572965 PPLO60437 1756 aa27.37■■□□□ 1.97
RPH3AL-209ENST00000572965 SLC26A8Q96RN1 970 aa27.37■■□□□ 1.97
RPH3AL-209ENST00000572965 NEUROD1Q13562 356 aa27.35■■□□□ 1.97
RPH3AL-209ENST00000572965 STAC3Q96MF2 364 aa27.34■■□□□ 1.97
RPH3AL-209ENST00000572965 DIP2AQ14689 1571 aa27.32■■□□□ 1.96
RPH3AL-209ENST00000572965 SIN3AQ96ST3 1273 aa27.32■■□□□ 1.96
RPH3AL-209ENST00000572965 TBX22Q9Y458 520 aa27.32■■□□□ 1.96
RPH3AL-209ENST00000572965 SETBP1Q9Y6X0 1596 aa27.31■■□□□ 1.96
RPH3AL-209ENST00000572965 IFT172Q9UG01 1749 aa27.31■■□□□ 1.96
RPH3AL-209ENST00000572965 DCAF11Q8TEB1 546 aa27.31■■□□□ 1.96
RPH3AL-209ENST00000572965 ZNF335Q9H4Z2 1342 aaPredicted RBP27.31■■□□□ 1.96
RPH3AL-209ENST00000572965 CCER1Q8TC90 406 aaPredicted RBP27.3■■□□□ 1.96
RPH3AL-209ENST00000572965 MYOM2P54296 1465 aa27.28■■□□□ 1.96
RPH3AL-209ENST00000572965 KDM2AQ9Y2K7 1162 aa27.28■■□□□ 1.96
RPH3AL-209ENST00000572965 ADAMTS13Q76LX8 1427 aa27.27■■□□□ 1.96
RPH3AL-209ENST00000572965 ADGRF5Q8IZF2 1346 aa27.27■■□□□ 1.96
RPH3AL-209ENST00000572965 CLSPNQ9HAW4 1339 aa27.27■■□□□ 1.96
RPH3AL-209ENST00000572965 PIK3R4Q99570 1358 aa27.25■■□□□ 1.95
RPH3AL-209ENST00000572965 CPS1P31327 1500 aa27.24■■□□□ 1.95
RPH3AL-209ENST00000572965 KCNA6P17658 529 aa27.23■■□□□ 1.95
RPH3AL-209ENST00000572965 NRXN3Q9Y4C0 1643 aa27.23■■□□□ 1.95
RPH3AL-209ENST00000572965 TONSLQ96HA7 1378 aa27.22■■□□□ 1.95
RPH3AL-209ENST00000572965 PIK3C2GO75747 1445 aa27.21■■□□□ 1.95
RPH3AL-209ENST00000572965 LTBP4Q8N2S1 1624 aa27.19■■□□□ 1.94
RPH3AL-209ENST00000572965 ALKQ9UM73 1620 aa27.19■■□□□ 1.94
RPH3AL-209ENST00000572965 L3MBTL2Q969R5 705 aa27.18■■□□□ 1.94
RPH3AL-209ENST00000572965 CERKQ8TCT0 537 aa27.17■■□□□ 1.94
RPH3AL-209ENST00000572965 NRXN1Q9ULB1 1477 aa27.17■■□□□ 1.94
RPH3AL-209ENST00000572965 LAMC1P11047 1609 aa27.16■■□□□ 1.94
RPH3AL-209ENST00000572965 NKTRP30414 1462 aaKnown RBP27.15■■□□□ 1.94
RPH3AL-209ENST00000572965 CHD2O14647 1828 aaKnown RBP27.15■■□□□ 1.94
RPH3AL-209ENST00000572965 NWD1Q149M9 1564 aa27.14■■□□□ 1.94
RPH3AL-209ENST00000572965 METP08581 1390 aa27.14■■□□□ 1.94
RPH3AL-209ENST00000572965 AMOTL2Q9Y2J4 779 aa27.14■■□□□ 1.94
RPH3AL-209ENST00000572965 PROSER2Q86WR7 435 aaPredicted RBP27.13■■□□□ 1.93
RPH3AL-209ENST00000572965 C14orf93Q9H972 538 aaKnown RBP27.13■■□□□ 1.93
RPH3AL-209ENST00000572965 CFAP70Q5T0N1 1121 aa27.11■■□□□ 1.93
RPH3AL-209ENST00000572965 STRCP1A6NGW2 1772 aa27.1■■□□□ 1.93
RPH3AL-209ENST00000572965 SETD1AO15047 1707 aaKnown RBP27.1■■□□□ 1.93
RPH3AL-209ENST00000572965 IQSEC2Q5JU85 1478 aa27.09■■□□□ 1.93
RPH3AL-209ENST00000572965 PTPRUQ92729 1446 aa27.07■■□□□ 1.92
RPH3AL-209ENST00000572965 LRRC7Q96NW7 1537 aa27.07■■□□□ 1.92
RPH3AL-209ENST00000572965 TMEM132EQ6IEE7 984 aa27.06■■□□□ 1.92
RPH3AL-209ENST00000572965 PRAG1Q86YV5 1406 aa27.06■■□□□ 1.92
RPH3AL-209ENST00000572965 C14orf37Q86TY3 774 aa27.05■■□□□ 1.92
RPH3AL-209ENST00000572965 TIMELESSQ9UNS1 1208 aa27.05■■□□□ 1.92
RPH3AL-209ENST00000572965 XRN1Q8IZH2 1706 aaKnown RBP27.04■■□□□ 1.92
RPH3AL-209ENST00000572965 STK26Q9P289 416 aa27.04■■□□□ 1.92
RPH3AL-209ENST00000572965 TMEM94Q12767 1356 aa27.04■■□□□ 1.92
RPH3AL-209ENST00000572965 LRPPRCP42704 1394 aaKnown RBP27.03■■□□□ 1.92
RPH3AL-209ENST00000572965 YTHDC2Q9H6S0 1430 aaKnown RBP27.01■■□□□ 1.91
RPH3AL-209ENST00000572965 KIAA1210Q9ULL0 1709 aa27■■□□□ 1.91
RPH3AL-209ENST00000572965 PTCH1Q13635 1447 aa26.99■■□□□ 1.91
RPH3AL-209ENST00000572965 NCOA3Q9Y6Q9 1424 aa26.99■■□□□ 1.91
RPH3AL-209ENST00000572965 ASXL1Q8IXJ9 1541 aa26.99■■□□□ 1.91
RPH3AL-209ENST00000572965 MSH6P52701 1360 aa26.98■■□□□ 1.91
RPH3AL-209ENST00000572965 ABCC11Q96J66 1382 aa26.98■■□□□ 1.91
RPH3AL-209ENST00000572965 RBM33Q96EV2 1170 aaKnown RBP26.97■■□□□ 1.91
RPH3AL-209ENST00000572965 TOM1O60784 492 aa26.95■■□□□ 1.9
RPH3AL-209ENST00000572965 TECPR2O15040 1411 aa26.95■■□□□ 1.9
RPH3AL-209ENST00000572965 KNDC1Q76NI1 1749 aa26.94■■□□□ 1.9
RPH3AL-209ENST00000572965 ADGRB1O14514 1584 aa26.94■■□□□ 1.9
RPH3AL-209ENST00000572965 ROBO2Q9HCK4 1378 aa26.94■■□□□ 1.9
RPH3AL-209ENST00000572965 UBAP1LF5GYI3 381 aa26.93■■□□□ 1.9
RPH3AL-209ENST00000572965 TRAK1Q9UPV9 953 aa26.92■■□□□ 1.9
RPH3AL-209ENST00000572965 ROCK2O75116 1388 aaKnown RBP26.92■■□□□ 1.9
RPH3AL-209ENST00000572965 SIRT1Q96EB6 747 aa26.91■■□□□ 1.9
RPH3AL-209ENST00000572965 C19orf44Q9H6X5 657 aa26.91■■□□□ 1.9
RPH3AL-209ENST00000572965 POGKQ9P215 609 aa26.91■■□□□ 1.9
RPH3AL-209ENST00000572965 XIRP1Q702N8 1843 aaKnown RBP26.9■■□□□ 1.9
RPH3AL-209ENST00000572965 ATF3P18847 181 aa26.9■■□□□ 1.9
RPH3AL-209ENST00000572965 NBPF1Q3BBV0 1214 aa26.9■■□□□ 1.9
RPH3AL-209ENST00000572965 TRPM1Q7Z4N2 1603 aa26.9■■□□□ 1.9
RPH3AL-209ENST00000572965 FAM135BQ49AJ0 1406 aa26.9■■□□□ 1.9
RPH3AL-209ENST00000572965 NBPF8Q3BBV2 869 aa26.88■■□□□ 1.89
RPH3AL-209ENST00000572965 FBXO41Q8TF61 875 aa26.88■■□□□ 1.89
RPH3AL-209ENST00000572965 DLC1Q96QB1 1528 aa26.88■■□□□ 1.89
RPH3AL-209ENST00000572965 CADPS2Q86UW7 1296 aa26.87■■□□□ 1.89
RPH3AL-209ENST00000572965 ADGRL3Q9HAR2 1447 aa26.87■■□□□ 1.89
RPH3AL-209ENST00000572965 WAPLQ7Z5K2 1190 aa26.86■■□□□ 1.89
RPH3AL-209ENST00000572965 PRAM1Q96QH2 718 aa26.86■■□□□ 1.89
RPH3AL-209ENST00000572965 SCAF1Q9H7N4 1312 aaKnown RBP26.85■■□□□ 1.89
RPH3AL-209ENST00000572965 RALGAPBQ86X10 1494 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms