RNA–Protein interactions for RNA: ENST00000572298.5

TOM1L1-211, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1L1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-211ENST00000572298 STRCQ7RTU9 1775 aa13.07□□□□□ -0.32
TOM1L1-211ENST00000572298 MED14O60244 1454 aa13.07□□□□□ -0.32
TOM1L1-211ENST00000572298 SCAF11Q99590 1463 aaKnown RBP13.07□□□□□ -0.32
TOM1L1-211ENST00000572298 TMEM131LA2VDJ0 1609 aa13.06□□□□□ -0.32
TOM1L1-211ENST00000572298 LTKP29376 864 aa13.06□□□□□ -0.32
TOM1L1-211ENST00000572298 BCANQ96GW7 911 aa13.06□□□□□ -0.32
TOM1L1-211ENST00000572298 NPHP4O75161 1426 aaPredicted RBP13.05□□□□□ -0.32
TOM1L1-211ENST00000572298 RIMS2Q9UQ26 1411 aa13.05□□□□□ -0.32
TOM1L1-211ENST00000572298 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
TOM1L1-211ENST00000572298 PCGF6Q9BYE7 350 aa13.05□□□□□ -0.32
TOM1L1-211ENST00000572298 ANKRD30BQ9BXX2 1392 aa13.05□□□□□ -0.32
TOM1L1-211ENST00000572298 POLR1AO95602 1720 aaPredicted RBP13.05□□□□□ -0.32
TOM1L1-211ENST00000572298 KIF1BO60333 1816 aa13.04□□□□□ -0.32
TOM1L1-211ENST00000572298 CLTCL1P53675 1640 aa13.03□□□□□ -0.32
TOM1L1-211ENST00000572298 PLEKHG1Q9ULL1 1385 aa13.02□□□□□ -0.33
TOM1L1-211ENST00000572298 ZFYVE9O95405 1425 aa13.02□□□□□ -0.33
TOM1L1-211ENST00000572298 RGL3Q3MIN7 710 aa13.01□□□□□ -0.33
TOM1L1-211ENST00000572298 STAC3Q96MF2 364 aa13.01□□□□□ -0.33
TOM1L1-211ENST00000572298 NEURL4Q96JN8 1562 aa13□□□□□ -0.33
TOM1L1-211ENST00000572298 MYO5BQ9ULV0 1848 aa12.99□□□□□ -0.33
TOM1L1-211ENST00000572298 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
TOM1L1-211ENST00000572298 TBX22Q9Y458 520 aa12.99□□□□□ -0.33
TOM1L1-211ENST00000572298 NUTM2DQ5VT03 806 aaPredicted RBP12.98□□□□□ -0.33
TOM1L1-211ENST00000572298 SPATA31E1Q6ZUB1 1445 aa12.97□□□□□ -0.33
TOM1L1-211ENST00000572298 SLC26A8Q96RN1 970 aa12.97□□□□□ -0.33
TOM1L1-211ENST00000572298 DHX57Q6P158 1386 aaKnown RBP12.96□□□□□ -0.33
TOM1L1-211ENST00000572298 PPP4R3CPQ6ZMV5 832 aa12.96□□□□□ -0.33
TOM1L1-211ENST00000572298 ZNF335Q9H4Z2 1342 aaPredicted RBP12.95□□□□□ -0.34
TOM1L1-211ENST00000572298 KCNA6P17658 529 aa12.95□□□□□ -0.34
TOM1L1-211ENST00000572298 PIK3R4Q99570 1358 aa12.94□□□□□ -0.34
TOM1L1-211ENST00000572298 NEXMIFQ5QGS0 1516 aa12.94□□□□□ -0.34
TOM1L1-211ENST00000572298 CERKQ8TCT0 537 aa12.94□□□□□ -0.34
TOM1L1-211ENST00000572298 DIP2AQ14689 1571 aa12.93□□□□□ -0.34
TOM1L1-211ENST00000572298 CPS1P31327 1500 aa12.93□□□□□ -0.34
TOM1L1-211ENST00000572298 DCAF11Q8TEB1 546 aa12.92□□□□□ -0.34
TOM1L1-211ENST00000572298 SETBP1Q9Y6X0 1596 aa12.91□□□□□ -0.34
TOM1L1-211ENST00000572298 CLSPNQ9HAW4 1339 aa12.9□□□□□ -0.34
TOM1L1-211ENST00000572298 ADAMTS13Q76LX8 1427 aa12.9□□□□□ -0.34
TOM1L1-211ENST00000572298 PPLO60437 1756 aa12.9□□□□□ -0.34
TOM1L1-211ENST00000572298 NEUROD1Q13562 356 aa12.9□□□□□ -0.34
TOM1L1-211ENST00000572298 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
TOM1L1-211ENST00000572298 ADGRF5Q8IZF2 1346 aa12.89□□□□□ -0.35
TOM1L1-211ENST00000572298 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
TOM1L1-211ENST00000572298 MYOM2P54296 1465 aa12.89□□□□□ -0.35
TOM1L1-211ENST00000572298 IQSEC2Q5JU85 1478 aa12.89□□□□□ -0.35
TOM1L1-211ENST00000572298 PROSER2Q86WR7 435 aaPredicted RBP12.88□□□□□ -0.35
TOM1L1-211ENST00000572298 SIN3AQ96ST3 1273 aa12.88□□□□□ -0.35
TOM1L1-211ENST00000572298 AMOTL2Q9Y2J4 779 aa12.88□□□□□ -0.35
TOM1L1-211ENST00000572298 CACNB1Q02641 598 aaPredicted RBP12.87□□□□□ -0.35
TOM1L1-211ENST00000572298 C14orf93Q9H972 538 aaKnown RBP12.87□□□□□ -0.35
TOM1L1-211ENST00000572298 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
TOM1L1-211ENST00000572298 PIK3C2GO75747 1445 aa12.86□□□□□ -0.35
TOM1L1-211ENST00000572298 IFT172Q9UG01 1749 aa12.85□□□□□ -0.35
TOM1L1-211ENST00000572298 ALKQ9UM73 1620 aa12.85□□□□□ -0.35
TOM1L1-211ENST00000572298 CCER1Q8TC90 406 aaPredicted RBP12.85□□□□□ -0.35
TOM1L1-211ENST00000572298 NCOA3Q9Y6Q9 1424 aa12.85□□□□□ -0.35
TOM1L1-211ENST00000572298 NRXN1Q9ULB1 1477 aa12.85□□□□□ -0.35
TOM1L1-211ENST00000572298 METP08581 1390 aa12.84□□□□□ -0.35
TOM1L1-211ENST00000572298 TONSLQ96HA7 1378 aa12.84□□□□□ -0.35
TOM1L1-211ENST00000572298 CHD2O14647 1828 aaKnown RBP12.84□□□□□ -0.35
TOM1L1-211ENST00000572298 TOM1O60784 492 aa12.84□□□□□ -0.35
TOM1L1-211ENST00000572298 L3MBTL2Q969R5 705 aa12.84□□□□□ -0.35
TOM1L1-211ENST00000572298 NRXN3Q9Y4C0 1643 aa12.84□□□□□ -0.35
TOM1L1-211ENST00000572298 NWD1Q149M9 1564 aa12.83□□□□□ -0.36
TOM1L1-211ENST00000572298 TIMELESSQ9UNS1 1208 aa12.83□□□□□ -0.36
TOM1L1-211ENST00000572298 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.36
TOM1L1-211ENST00000572298 CFAP70Q5T0N1 1121 aa12.82□□□□□ -0.36
TOM1L1-211ENST00000572298 C14orf37Q86TY3 774 aa12.82□□□□□ -0.36
TOM1L1-211ENST00000572298 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
TOM1L1-211ENST00000572298 TMEM94Q12767 1356 aa12.81□□□□□ -0.36
TOM1L1-211ENST00000572298 SIRT1Q96EB6 747 aa12.81□□□□□ -0.36
TOM1L1-211ENST00000572298 MSH6P52701 1360 aa12.81□□□□□ -0.36
TOM1L1-211ENST00000572298 LAMC1P11047 1609 aa12.8□□□□□ -0.36
TOM1L1-211ENST00000572298 PTPRUQ92729 1446 aa12.8□□□□□ -0.36
TOM1L1-211ENST00000572298 UBAP1LF5GYI3 381 aa12.8□□□□□ -0.36
TOM1L1-211ENST00000572298 TMEM132EQ6IEE7 984 aa12.8□□□□□ -0.36
TOM1L1-211ENST00000572298 C19orf44Q9H6X5 657 aa12.8□□□□□ -0.36
TOM1L1-211ENST00000572298 LRPPRCP42704 1394 aaKnown RBP12.8□□□□□ -0.36
TOM1L1-211ENST00000572298 ABCC11Q96J66 1382 aa12.8□□□□□ -0.36
TOM1L1-211ENST00000572298 STRCP1A6NGW2 1772 aa12.79□□□□□ -0.36
TOM1L1-211ENST00000572298 STK26Q9P289 416 aa12.79□□□□□ -0.36
TOM1L1-211ENST00000572298 PTCH1Q13635 1447 aa12.79□□□□□ -0.36
TOM1L1-211ENST00000572298 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
TOM1L1-211ENST00000572298 ATF3P18847 181 aa12.78□□□□□ -0.36
TOM1L1-211ENST00000572298 CADPS2Q86UW7 1296 aa12.78□□□□□ -0.36
TOM1L1-211ENST00000572298 YTHDC2Q9H6S0 1430 aaKnown RBP12.78□□□□□ -0.36
TOM1L1-211ENST00000572298 SETD1AO15047 1707 aaKnown RBP12.76□□□□□ -0.37
TOM1L1-211ENST00000572298 RBM33Q96EV2 1170 aaKnown RBP12.76□□□□□ -0.37
TOM1L1-211ENST00000572298 TECPR2O15040 1411 aa12.76□□□□□ -0.37
TOM1L1-211ENST00000572298 XRN1Q8IZH2 1706 aaKnown RBP12.76□□□□□ -0.37
TOM1L1-211ENST00000572298 FAM135BQ49AJ0 1406 aa12.75□□□□□ -0.37
TOM1L1-211ENST00000572298 POGKQ9P215 609 aa12.75□□□□□ -0.37
TOM1L1-211ENST00000572298 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
TOM1L1-211ENST00000572298 ROBO2Q9HCK4 1378 aa12.74□□□□□ -0.37
TOM1L1-211ENST00000572298 TRAK1Q9UPV9 953 aa12.74□□□□□ -0.37
TOM1L1-211ENST00000572298 DCCP43146 1447 aa12.73□□□□□ -0.37
TOM1L1-211ENST00000572298 KCNA4P22459 653 aa12.73□□□□□ -0.37
TOM1L1-211ENST00000572298 WAPLQ7Z5K2 1190 aa12.72□□□□□ -0.37
TOM1L1-211ENST00000572298 PRAM1Q96QH2 718 aa12.72□□□□□ -0.37
TOM1L1-211ENST00000572298 SLAIN2Q9P270 581 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms