RNA–Protein interactions for RNA: ENST00000570688.1

ABR-208, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-208ENST00000570688 IFT172Q9UG01 1749 aa16.48■□□□□ 0.23
ABR-208ENST00000570688 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
ABR-208ENST00000570688 NPHP4O75161 1426 aaPredicted RBP16.48■□□□□ 0.23
ABR-208ENST00000570688 PPLO60437 1756 aa16.48■□□□□ 0.23
ABR-208ENST00000570688 NRXN3Q9Y4C0 1643 aa16.48■□□□□ 0.23
ABR-208ENST00000570688 TXNDC2Q86VQ3 553 aa16.47■□□□□ 0.23
ABR-208ENST00000570688 ANKLE2Q86XL3 938 aa16.47■□□□□ 0.23
ABR-208ENST00000570688 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
ABR-208ENST00000570688 STRCP1A6NGW2 1772 aa16.46■□□□□ 0.23
ABR-208ENST00000570688 SENP3Q9H4L4 574 aaPredicted RBP16.45■□□□□ 0.22
ABR-208ENST00000570688 LTBP4Q8N2S1 1624 aa16.44■□□□□ 0.22
ABR-208ENST00000570688 ADAMTS13Q76LX8 1427 aa16.44■□□□□ 0.22
ABR-208ENST00000570688 PLEKHG1Q9ULL1 1385 aa16.42■□□□□ 0.22
ABR-208ENST00000570688 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
ABR-208ENST00000570688 ZNF335Q9H4Z2 1342 aaPredicted RBP16.42■□□□□ 0.22
ABR-208ENST00000570688 SETD1AO15047 1707 aaKnown RBP16.42■□□□□ 0.22
ABR-208ENST00000570688 RGL3Q3MIN7 710 aa16.4■□□□□ 0.22
ABR-208ENST00000570688 SETBP1Q9Y6X0 1596 aa16.39■□□□□ 0.21
ABR-208ENST00000570688 ZNF326Q5BKZ1 582 aaKnown RBP16.39■□□□□ 0.21
ABR-208ENST00000570688 SLC26A8Q96RN1 970 aa16.39■□□□□ 0.21
ABR-208ENST00000570688 ADGRF5Q8IZF2 1346 aa16.39■□□□□ 0.21
ABR-208ENST00000570688 EID1Q9Y6B2 187 aa16.38■□□□□ 0.21
ABR-208ENST00000570688 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
ABR-208ENST00000570688 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
ABR-208ENST00000570688 PTPRUQ92729 1446 aa16.36■□□□□ 0.21
ABR-208ENST00000570688 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.35■□□□□ 0.21
ABR-208ENST00000570688 RPGRIP1LQ68CZ1 1315 aa16.35■□□□□ 0.21
ABR-208ENST00000570688 ASXL1Q8IXJ9 1541 aa16.35■□□□□ 0.21
ABR-208ENST00000570688 CHD2O14647 1828 aaKnown RBP16.34■□□□□ 0.21
ABR-208ENST00000570688 XIRP1Q702N8 1843 aaKnown RBP16.33■□□□□ 0.21
ABR-208ENST00000570688 METP08581 1390 aa16.33■□□□□ 0.2
ABR-208ENST00000570688 MYOM2P54296 1465 aa16.33■□□□□ 0.2
ABR-208ENST00000570688 NWD1Q149M9 1564 aa16.33■□□□□ 0.2
ABR-208ENST00000570688 ALKQ9UM73 1620 aa16.33■□□□□ 0.2
ABR-208ENST00000570688 PIK3C2GO75747 1445 aa16.32■□□□□ 0.2
ABR-208ENST00000570688 PPP1R15AO75807 674 aaPredicted RBP16.32■□□□□ 0.2
ABR-208ENST00000570688 DIP2AQ14689 1571 aa16.31■□□□□ 0.2
ABR-208ENST00000570688 TBX22Q9Y458 520 aa16.31■□□□□ 0.2
ABR-208ENST00000570688 XRN1Q8IZH2 1706 aaKnown RBP16.3■□□□□ 0.2
ABR-208ENST00000570688 VGFO15240 615 aaPredicted RBP16.28■□□□□ 0.2
ABR-208ENST00000570688 HDGFP51858 240 aaKnown RBP16.28■□□□□ 0.2
ABR-208ENST00000570688 NEUROD1Q13562 356 aa16.28■□□□□ 0.2
ABR-208ENST00000570688 L3MBTL2Q969R5 705 aa16.28■□□□□ 0.2
ABR-208ENST00000570688 LRRC7Q96NW7 1537 aa16.28■□□□□ 0.2
ABR-208ENST00000570688 DCAF11Q8TEB1 546 aa16.27■□□□□ 0.2
ABR-208ENST00000570688 KDM2AQ9Y2K7 1162 aa16.26■□□□□ 0.19
ABR-208ENST00000570688 KCNA6P17658 529 aa16.25■□□□□ 0.19
ABR-208ENST00000570688 RBM33Q96EV2 1170 aaKnown RBP16.25■□□□□ 0.19
ABR-208ENST00000570688 BCANQ96GW7 911 aa16.25■□□□□ 0.19
ABR-208ENST00000570688 ADGRB1O14514 1584 aa16.25■□□□□ 0.19
ABR-208ENST00000570688 CPS1P31327 1500 aa16.24■□□□□ 0.19
ABR-208ENST00000570688 CFAP70Q5T0N1 1121 aa16.24■□□□□ 0.19
ABR-208ENST00000570688 CERKQ8TCT0 537 aa16.24■□□□□ 0.19
ABR-208ENST00000570688 C14orf93Q9H972 538 aaKnown RBP16.23■□□□□ 0.19
ABR-208ENST00000570688 PIK3R4Q99570 1358 aa16.23■□□□□ 0.19
ABR-208ENST00000570688 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
ABR-208ENST00000570688 TMEM132EQ6IEE7 984 aa16.22■□□□□ 0.19
ABR-208ENST00000570688 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
ABR-208ENST00000570688 NBPF8Q3BBV2 869 aa16.21■□□□□ 0.19
ABR-208ENST00000570688 AMOTL2Q9Y2J4 779 aa16.21■□□□□ 0.19
ABR-208ENST00000570688 ROBO2Q9HCK4 1378 aa16.2■□□□□ 0.18
ABR-208ENST00000570688 LAMC1P11047 1609 aa16.19■□□□□ 0.18
ABR-208ENST00000570688 TMEM94Q12767 1356 aa16.19■□□□□ 0.18
ABR-208ENST00000570688 KNDC1Q76NI1 1749 aa16.18■□□□□ 0.18
ABR-208ENST00000570688 KIAA1210Q9ULL0 1709 aa16.17■□□□□ 0.18
ABR-208ENST00000570688 TRPM1Q7Z4N2 1603 aa16.17■□□□□ 0.18
ABR-208ENST00000570688 NBPF1Q3BBV0 1214 aa16.17■□□□□ 0.18
ABR-208ENST00000570688 TECPR2O15040 1411 aa16.17■□□□□ 0.18
ABR-208ENST00000570688 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
ABR-208ENST00000570688 LRPPRCP42704 1394 aaKnown RBP16.16■□□□□ 0.18
ABR-208ENST00000570688 PLEKHH1Q9ULM0 1364 aa16.16■□□□□ 0.18
ABR-208ENST00000570688 YTHDC2Q9H6S0 1430 aaKnown RBP16.16■□□□□ 0.18
ABR-208ENST00000570688 NALCNQ8IZF0 1738 aa16.16■□□□□ 0.18
ABR-208ENST00000570688 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
ABR-208ENST00000570688 PTCH1Q13635 1447 aa16.15■□□□□ 0.18
ABR-208ENST00000570688 PROSER2Q86WR7 435 aaPredicted RBP16.15■□□□□ 0.18
ABR-208ENST00000570688 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.15■□□□□ 0.18
ABR-208ENST00000570688 ABCC11Q96J66 1382 aa16.14■□□□□ 0.17
ABR-208ENST00000570688 CCER1Q8TC90 406 aaPredicted RBP16.14■□□□□ 0.17
ABR-208ENST00000570688 STAC3Q96MF2 364 aa16.14■□□□□ 0.17
ABR-208ENST00000570688 STK26Q9P289 416 aa16.13■□□□□ 0.17
ABR-208ENST00000570688 ARHGEF28Q8N1W1 1705 aaKnown RBP16.12■□□□□ 0.17
ABR-208ENST00000570688 TONSLQ96HA7 1378 aa16.12■□□□□ 0.17
ABR-208ENST00000570688 WAPLQ7Z5K2 1190 aa16.11■□□□□ 0.17
ABR-208ENST00000570688 DLC1Q96QB1 1528 aa16.09■□□□□ 0.17
ABR-208ENST00000570688 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.16
ABR-208ENST00000570688 NCOA3Q9Y6Q9 1424 aa16.08■□□□□ 0.16
ABR-208ENST00000570688 TRAK1Q9UPV9 953 aa16.07■□□□□ 0.16
ABR-208ENST00000570688 GPRASP1Q5JY77 1395 aa16.07■□□□□ 0.16
ABR-208ENST00000570688 RALGAPBQ86X10 1494 aa16.07■□□□□ 0.16
ABR-208ENST00000570688 FAM135BQ49AJ0 1406 aa16.06■□□□□ 0.16
ABR-208ENST00000570688 SIRT1Q96EB6 747 aa16.04■□□□□ 0.16
ABR-208ENST00000570688 UBAP1LF5GYI3 381 aa16.03■□□□□ 0.16
ABR-208ENST00000570688 FBXO41Q8TF61 875 aa16.03■□□□□ 0.16
ABR-208ENST00000570688 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
ABR-208ENST00000570688 MST1RQ04912 1400 aa16.02■□□□□ 0.16
ABR-208ENST00000570688 SAFB2Q14151 953 aaKnown RBP eCLIP16.02■□□□□ 0.16
ABR-208ENST00000570688 ILDR1Q86SU0 546 aaPredicted RBP16.02■□□□□ 0.16
ABR-208ENST00000570688 C19orf44Q9H6X5 657 aa16.02■□□□□ 0.16
ABR-208ENST00000570688 MSH6P52701 1360 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms