RNA–Protein interactions for RNA: ENST00000570193.5

PKD1-239, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-239ENST00000570193 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.1■■□□□ 1.29
PKD1-239ENST00000570193 MYO5BQ9ULV0 1848 aa23.08■■□□□ 1.29
PKD1-239ENST00000570193 NUTM2DQ5VT03 806 aaPredicted RBP23.08■■□□□ 1.29
PKD1-239ENST00000570193 SPHKAPQ2M3C7 1700 aa23.08■■□□□ 1.28
PKD1-239ENST00000570193 ZFYVE9O95405 1425 aa23.08■■□□□ 1.28
PKD1-239ENST00000570193 ZNF326Q5BKZ1 582 aaKnown RBP23.06■■□□□ 1.28
PKD1-239ENST00000570193 PLEKHG1Q9ULL1 1385 aa23.05■■□□□ 1.28
PKD1-239ENST00000570193 TOM1O60784 492 aa23.04■■□□□ 1.28
PKD1-239ENST00000570193 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
PKD1-239ENST00000570193 STRCP1A6NGW2 1772 aa23.03■■□□□ 1.28
PKD1-239ENST00000570193 LRRC7Q96NW7 1537 aa23.03■■□□□ 1.28
PKD1-239ENST00000570193 KCNA6P17658 529 aa23.01■■□□□ 1.27
PKD1-239ENST00000570193 PIP4K2BP78356 416 aa23.01■■□□□ 1.27
PKD1-239ENST00000570193 TRPM2O94759 1503 aa23.01■■□□□ 1.27
PKD1-239ENST00000570193 SETD5Q9C0A6 1442 aa23■■□□□ 1.27
PKD1-239ENST00000570193 FOXD1Q16676 465 aa22.99■■□□□ 1.27
PKD1-239ENST00000570193 MPHOSPH9Q99550 1183 aa22.99■■□□□ 1.27
PKD1-239ENST00000570193 ACIN1Q9UKV3 1341 aaKnown RBP22.99■■□□□ 1.27
PKD1-239ENST00000570193 CLTCL1P53675 1640 aa22.98■■□□□ 1.27
PKD1-239ENST00000570193 PROSER2Q86WR7 435 aaPredicted RBP22.97■■□□□ 1.27
PKD1-239ENST00000570193 TBX22Q9Y458 520 aa22.97■■□□□ 1.27
PKD1-239ENST00000570193 RAB3GAP2Q9H2M9 1393 aa22.92■■□□□ 1.26
PKD1-239ENST00000570193 RBM33Q96EV2 1170 aaKnown RBP22.92■■□□□ 1.26
PKD1-239ENST00000570193 TMEM94Q12767 1356 aa22.91■■□□□ 1.26
PKD1-239ENST00000570193 KIF1BO60333 1816 aa22.91■■□□□ 1.26
PKD1-239ENST00000570193 ADAMTS13Q76LX8 1427 aa22.91■■□□□ 1.26
PKD1-239ENST00000570193 NKTRP30414 1462 aaKnown RBP22.88■■□□□ 1.25
PKD1-239ENST00000570193 CCDC144AA2RUR9 1427 aa22.87■■□□□ 1.25
PKD1-239ENST00000570193 DIP2AQ14689 1571 aa22.87■■□□□ 1.25
PKD1-239ENST00000570193 NWD1Q149M9 1564 aa22.87■■□□□ 1.25
PKD1-239ENST00000570193 NEXMIFQ5QGS0 1516 aa22.86■■□□□ 1.25
PKD1-239ENST00000570193 PIK3R4Q99570 1358 aa22.86■■□□□ 1.25
PKD1-239ENST00000570193 VGFO15240 615 aaPredicted RBP22.85■■□□□ 1.25
PKD1-239ENST00000570193 RPGRIP1LQ68CZ1 1315 aa22.84■■□□□ 1.25
PKD1-239ENST00000570193 HSPA1LP34931 641 aa22.84■■□□□ 1.25
PKD1-239ENST00000570193 C14orf37Q86TY3 774 aa22.84■■□□□ 1.25
PKD1-239ENST00000570193 CHD2O14647 1828 aaKnown RBP22.84■■□□□ 1.25
PKD1-239ENST00000570193 XIRP1Q702N8 1843 aaKnown RBP22.83■■□□□ 1.25
PKD1-239ENST00000570193 RGL3Q3MIN7 710 aa22.83■■□□□ 1.25
PKD1-239ENST00000570193 AMOTL2Q9Y2J4 779 aa22.83■■□□□ 1.25
PKD1-239ENST00000570193 ALKQ9UM73 1620 aa22.82■■□□□ 1.24
PKD1-239ENST00000570193 SETBP1Q9Y6X0 1596 aa22.82■■□□□ 1.24
PKD1-239ENST00000570193 MSH6P52701 1360 aa22.82■■□□□ 1.24
PKD1-239ENST00000570193 NRXN3Q9Y4C0 1643 aa22.79■■□□□ 1.24
PKD1-239ENST00000570193 PTPRUQ92729 1446 aa22.78■■□□□ 1.24
PKD1-239ENST00000570193 METP08581 1390 aa22.77■■□□□ 1.24
PKD1-239ENST00000570193 HRCP23327 699 aa22.77■■□□□ 1.24
PKD1-239ENST00000570193 NCOA3Q9Y6Q9 1424 aa22.74■■□□□ 1.23
PKD1-239ENST00000570193 SPATA31E1Q6ZUB1 1445 aa22.74■■□□□ 1.23
PKD1-239ENST00000570193 DISP3Q9P2K9 1392 aa22.72■■□□□ 1.23
PKD1-239ENST00000570193 PPLO60437 1756 aa22.71■■□□□ 1.23
PKD1-239ENST00000570193 ATF3P18847 181 aa22.71■■□□□ 1.23
PKD1-239ENST00000570193 C19orf44Q9H6X5 657 aa22.71■■□□□ 1.23
PKD1-239ENST00000570193 SLAIN2Q9P270 581 aa22.71■■□□□ 1.23
PKD1-239ENST00000570193 ANKRD30BQ9BXX2 1392 aa22.71■■□□□ 1.23
PKD1-239ENST00000570193 ADGRF5Q8IZF2 1346 aa22.7■■□□□ 1.22
PKD1-239ENST00000570193 FAM135BQ49AJ0 1406 aa22.7■■□□□ 1.22
PKD1-239ENST00000570193 CADPS2Q86UW7 1296 aa22.69■■□□□ 1.22
PKD1-239ENST00000570193 XRN1Q8IZH2 1706 aaKnown RBP22.68■■□□□ 1.22
PKD1-239ENST00000570193 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.62■■□□□ 1.21
PKD1-239ENST00000570193 ROBO1Q9Y6N7 1651 aa22.62■■□□□ 1.21
PKD1-239ENST00000570193 SETD1AO15047 1707 aaKnown RBP22.6■■□□□ 1.21
PKD1-239ENST00000570193 IFT172Q9UG01 1749 aa22.6■■□□□ 1.21
PKD1-239ENST00000570193 STK26Q9P289 416 aa22.6■■□□□ 1.21
PKD1-239ENST00000570193 ROBO2Q9HCK4 1378 aa22.59■■□□□ 1.21
PKD1-239ENST00000570193 PTCH1Q13635 1447 aa22.58■■□□□ 1.21
PKD1-239ENST00000570193 TMEM132EQ6IEE7 984 aa22.58■■□□□ 1.21
PKD1-239ENST00000570193 PIK3C2GO75747 1445 aa22.57■■□□□ 1.2
PKD1-239ENST00000570193 DCCP43146 1447 aa22.57■■□□□ 1.2
PKD1-239ENST00000570193 ADGRL3Q9HAR2 1447 aa22.57■■□□□ 1.2
PKD1-239ENST00000570193 KDM2AQ9Y2K7 1162 aa22.56■■□□□ 1.2
PKD1-239ENST00000570193 DCAF11Q8TEB1 546 aa22.54■■□□□ 1.2
PKD1-239ENST00000570193 C14orf93Q9H972 538 aaKnown RBP22.54■■□□□ 1.2
PKD1-239ENST00000570193 MYOM2P54296 1465 aa22.54■■□□□ 1.2
PKD1-239ENST00000570193 CFAP70Q5T0N1 1121 aa22.53■■□□□ 1.2
PKD1-239ENST00000570193 MED1Q15648 1581 aaPredicted RBP22.53■■□□□ 1.2
PKD1-239ENST00000570193 LRPPRCP42704 1394 aaKnown RBP22.52■■□□□ 1.2
PKD1-239ENST00000570193 PRAG1Q86YV5 1406 aa22.52■■□□□ 1.2
PKD1-239ENST00000570193 BRINP3Q76B58 766 aa22.52■■□□□ 1.2
PKD1-239ENST00000570193 PHF23Q9BUL5 403 aaPredicted RBP22.51■■□□□ 1.19
PKD1-239ENST00000570193 NALCNQ8IZF0 1738 aa22.51■■□□□ 1.19
PKD1-239ENST00000570193 MST1RQ04912 1400 aa22.5■■□□□ 1.19
PKD1-239ENST00000570193 NRXN1Q9ULB1 1477 aa22.5■■□□□ 1.19
PKD1-239ENST00000570193 WAPLQ7Z5K2 1190 aa22.5■■□□□ 1.19
PKD1-239ENST00000570193 PHLPP1O60346 1717 aa22.5■■□□□ 1.19
PKD1-239ENST00000570193 ABCC11Q96J66 1382 aa22.5■■□□□ 1.19
PKD1-239ENST00000570193 DHX57Q6P158 1386 aaKnown RBP22.49■■□□□ 1.19
PKD1-239ENST00000570193 YTHDC2Q9H6S0 1430 aaKnown RBP22.48■■□□□ 1.19
PKD1-239ENST00000570193 STAC3Q96MF2 364 aa22.48■■□□□ 1.19
PKD1-239ENST00000570193 ASXL1Q8IXJ9 1541 aa22.47■■□□□ 1.19
PKD1-239ENST00000570193 ILDR2Q71H61 639 aa22.47■■□□□ 1.19
PKD1-239ENST00000570193 TECPR2O15040 1411 aa22.47■■□□□ 1.19
PKD1-239ENST00000570193 JCADQ9P266 1359 aa22.45■■□□□ 1.18
PKD1-239ENST00000570193 LAMC1P11047 1609 aa22.45■■□□□ 1.18
PKD1-239ENST00000570193 C1orf167Q5SNV9 1468 aa22.43■■□□□ 1.18
PKD1-239ENST00000570193 TRIM26Q12899 539 aaPredicted RBP22.43■■□□□ 1.18
PKD1-239ENST00000570193 AHDC1Q5TGY3 1603 aaPredicted RBP22.42■■□□□ 1.18
PKD1-239ENST00000570193 PLEKHH1Q9ULM0 1364 aa22.42■■□□□ 1.18
PKD1-239ENST00000570193 SIRT1Q96EB6 747 aa22.42■■□□□ 1.18
PKD1-239ENST00000570193 KNDC1Q76NI1 1749 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms