RNA–Protein interactions for RNA: ENST00000569882.1

CNOT1-219, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-219ENST00000569882 LRRIQ1Q96JM4 1722 aa7.59□□□□□ -1.19
CNOT1-219ENST00000569882 LSM11P83369 360 aaKnown RBP eCLIP7.59□□□□□ -1.19
CNOT1-219ENST00000569882 KHSRPQ92945 711 aaKnown RBP eCLIP7.59□□□□□ -1.191e-9■■□□□ 12.6
CNOT1-219ENST00000569882 NEO1Q92859 1461 aa7.59□□□□□ -1.19
CNOT1-219ENST00000569882 GPR153Q6NV75 609 aa7.58□□□□□ -1.2
CNOT1-219ENST00000569882 DENND4BO75064 1496 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-219ENST00000569882 ADGRL1O94910 1474 aa7.57□□□□□ -1.2
CNOT1-219ENST00000569882 ARSIQ5FYB1 569 aa7.57□□□□□ -1.2
CNOT1-219ENST00000569882 EFCAB2Q5VUJ9 269 aa7.57□□□□□ -1.2
CNOT1-219ENST00000569882 TMC2Q8TDI7 906 aa7.57□□□□□ -1.2
CNOT1-219ENST00000569882 ZNF777Q9ULD5 760 aaPredicted RBP7.57□□□□□ -1.2
CNOT1-219ENST00000569882 AKNAQ7Z591 1439 aa7.57□□□□□ -1.2
CNOT1-219ENST00000569882 ARAP3Q8WWN8 1544 aa7.57□□□□□ -1.2
CNOT1-219ENST00000569882 RAPGEF3O95398 923 aa7.56□□□□□ -1.2
CNOT1-219ENST00000569882 COL17A1Q9UMD9 1497 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-219ENST00000569882 CCNB3Q8WWL7 1395 aa7.55□□□□□ -1.2
CNOT1-219ENST00000569882 PLCH2O75038 1416 aa7.54□□□□□ -1.2
CNOT1-219ENST00000569882 SCAPERQ9BY12 1400 aa7.54□□□□□ -1.2
CNOT1-219ENST00000569882 EHBP1L1Q8N3D4 1523 aa7.54□□□□□ -1.2
CNOT1-219ENST00000569882 PREX2Q70Z35 1606 aa7.54□□□□□ -1.2
CNOT1-219ENST00000569882 GTPBP6O43824 516 aaPredicted RBP7.54□□□□□ -1.2
CNOT1-219ENST00000569882 ITSN2Q9NZM3 1697 aa7.54□□□□□ -1.2
CNOT1-219ENST00000569882 RICTORQ6R327 1708 aa7.53□□□□□ -1.2
CNOT1-219ENST00000569882 SLC24A1O60721 1099 aa7.53□□□□□ -1.2
CNOT1-219ENST00000569882 VPS8Q8N3P4 1428 aa7.52□□□□□ -1.2
CNOT1-219ENST00000569882 ZFYVE16Q7Z3T8 1539 aa7.52□□□□□ -1.2
CNOT1-219ENST00000569882 CDC42BPAQ5VT25 1732 aa7.52□□□□□ -1.2
CNOT1-219ENST00000569882 SUPT6HQ7KZ85 1726 aaKnown RBP7.52□□□□□ -1.2
CNOT1-219ENST00000569882 RTN4Q9NQC3 1192 aaKnown RBP7.52□□□□□ -1.21
CNOT1-219ENST00000569882 CFDP1Q9UEE9 299 aaPredicted RBP7.52□□□□□ -1.21
CNOT1-219ENST00000569882 CDC42BPBQ9Y5S2 1711 aa7.52□□□□□ -1.21
CNOT1-219ENST00000569882 POGZQ7Z3K3 1410 aa7.52□□□□□ -1.21
CNOT1-219ENST00000569882 ZNF518AQ6AHZ1 1483 aa7.51□□□□□ -1.21
CNOT1-219ENST00000569882 GPHNQ9NQX3 736 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-219ENST00000569882 ARHGEF40Q8TER5 1519 aa7.51□□□□□ -1.21
CNOT1-219ENST00000569882 FRMPD1Q5SYB0 1578 aa7.5□□□□□ -1.21
CNOT1-219ENST00000569882 NUDT7P0C024 238 aa7.5□□□□□ -1.21
CNOT1-219ENST00000569882 DSG2Q14126 1118 aa7.5□□□□□ -1.21
CNOT1-219ENST00000569882 ESF1Q9H501 851 aaKnown RBP7.5□□□□□ -1.21
CNOT1-219ENST00000569882 TIAM1Q13009 1591 aa7.5□□□□□ -1.21
CNOT1-219ENST00000569882 ZMYM4Q5VZL5 1548 aa7.49□□□□□ -1.21
CNOT1-219ENST00000569882 RGS20O76081 388 aa7.49□□□□□ -1.21
CNOT1-219ENST00000569882 FOXK1P85037 733 aa7.49□□□□□ -1.21
CNOT1-219ENST00000569882 MLECQ14165 292 aa7.49□□□□□ -1.21
CNOT1-219ENST00000569882 PLPP6Q8IY26 295 aa7.49□□□□□ -1.21
CNOT1-219ENST00000569882 RYDENQ9NUL5 291 aaKnown RBP7.49□□□□□ -1.21
CNOT1-219ENST00000569882 PCDHGA4Q9Y5G9 962 aa7.49□□□□□ -1.21
CNOT1-219ENST00000569882 HECW2Q9P2P5 1572 aa7.49□□□□□ -1.21
CNOT1-219ENST00000569882 MAGI2Q86UL8 1455 aa7.49□□□□□ -1.21
CNOT1-219ENST00000569882 PLEKHH2Q8IVE3 1493 aa7.49□□□□□ -1.21
CNOT1-219ENST00000569882 ABCC1P33527 1531 aa7.48□□□□□ -1.21
CNOT1-219ENST00000569882 SYCP2Q9BX26 1530 aa7.48□□□□□ -1.21
CNOT1-219ENST00000569882 KDM4FA0A1W2PPD8 638 aa7.48□□□□□ -1.21
CNOT1-219ENST00000569882 ZNF316A6NFI3 1004 aaPredicted RBP7.48□□□□□ -1.21
CNOT1-219ENST00000569882 SLC34A2O95436 690 aa7.48□□□□□ -1.21
CNOT1-219ENST00000569882 PBX2P40425 430 aa7.47□□□□□ -1.21
CNOT1-219ENST00000569882 AFAP1Q8N556 730 aa7.47□□□□□ -1.21
CNOT1-219ENST00000569882 NCOA2Q15596 1464 aa7.47□□□□□ -1.21
CNOT1-219ENST00000569882 SPAG9O60271 1321 aaKnown RBP7.47□□□□□ -1.21
CNOT1-219ENST00000569882 NCKAP5LQ9HCH0 1330 aa7.47□□□□□ -1.21
CNOT1-219ENST00000569882 SAMD9LQ8IVG5 1584 aa7.46□□□□□ -1.21
CNOT1-219ENST00000569882 C9orf84Q5VXU9 1444 aa7.46□□□□□ -1.21
CNOT1-219ENST00000569882 YEATS2Q9ULM3 1422 aa7.46□□□□□ -1.21
CNOT1-219ENST00000569882 HNRNPMP52272 730 aaKnown RBP eCLIP7.46□□□□□ -1.224e-6■■□□□ 11.9
CNOT1-219ENST00000569882 AMER1Q5JTC6 1135 aaPredicted RBP7.46□□□□□ -1.22
CNOT1-219ENST00000569882 CRISPLD2Q9H0B8 497 aa7.46□□□□□ -1.22
CNOT1-219ENST00000569882 BCORL1Q5H9F3 1711 aa7.46□□□□□ -1.22
CNOT1-219ENST00000569882 GPATCH8Q9UKJ3 1502 aaKnown RBP7.46□□□□□ -1.22
CNOT1-219ENST00000569882 FER1L4A9Z1Z3 1794 aa7.46□□□□□ -1.22
CNOT1-219ENST00000569882 RIMS1Q86UR5 1692 aaKnown RBP7.45□□□□□ -1.22
CNOT1-219ENST00000569882 ATP10AO60312 1499 aa7.45□□□□□ -1.22
CNOT1-219ENST00000569882 LRRC9Q6ZRR7 1453 aa7.45□□□□□ -1.22
CNOT1-219ENST00000569882 LHX6Q9UPM6 363 aa7.45□□□□□ -1.22
CNOT1-219ENST00000569882 KDM5CP41229 1560 aa7.45□□□□□ -1.22
CNOT1-219ENST00000569882 PTCD2Q8WV60 388 aaKnown RBP7.44□□□□□ -1.22
CNOT1-219ENST00000569882 MADDQ8WXG6 1647 aa7.44□□□□□ -1.22
CNOT1-219ENST00000569882 TRAPPC8Q9Y2L5 1435 aa7.44□□□□□ -1.22
CNOT1-219ENST00000569882 CAMSAP2Q08AD1 1489 aa7.43□□□□□ -1.22
CNOT1-219ENST00000569882 MAP3K1Q13233 1512 aa7.43□□□□□ -1.22
CNOT1-219ENST00000569882 ABCA6Q8N139 1617 aa7.43□□□□□ -1.22
CNOT1-219ENST00000569882 TSPY4P0CV99 314 aa7.43□□□□□ -1.22
CNOT1-219ENST00000569882 TSPY10P0CW01 314 aa7.43□□□□□ -1.22
CNOT1-219ENST00000569882 CADPS2Q86UW7 1296 aa7.43□□□□□ -1.22
CNOT1-219ENST00000569882 ATP7AQ04656 1500 aa7.42□□□□□ -1.22
CNOT1-219ENST00000569882 DIP2CQ9Y2E4 1556 aa7.42□□□□□ -1.22
CNOT1-219ENST00000569882 ADAMTSL3P82987 1691 aa7.42□□□□□ -1.22
CNOT1-219ENST00000569882 KIAA1107Q9UPP5 1409 aa7.42□□□□□ -1.22
CNOT1-219ENST00000569882 CCDC141Q6ZP82 1450 aa7.42□□□□□ -1.22
CNOT1-219ENST00000569882 MLH3Q9UHC1 1453 aa7.42□□□□□ -1.22
CNOT1-219ENST00000569882 ARHGEF12Q9NZN5 1544 aa7.42□□□□□ -1.22
CNOT1-219ENST00000569882 ADGBQ8N7X0 1667 aa7.41□□□□□ -1.22
CNOT1-219ENST00000569882 KIDINS220Q9ULH0 1771 aa7.41□□□□□ -1.22
CNOT1-219ENST00000569882 PPP1R15BQ5SWA1 713 aa7.41□□□□□ -1.22
CNOT1-219ENST00000569882 KANK4Q5T7N3 995 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-219ENST00000569882 RSPH4AQ5TD94 716 aa7.41□□□□□ -1.22
CNOT1-219ENST00000569882 Q6ZNB5 142 aa7.41□□□□□ -1.22
CNOT1-219ENST00000569882 ZNF644Q9H582 1327 aaPredicted RBP7.41□□□□□ -1.22
CNOT1-219ENST00000569882 PTPRMP28827 1452 aa7.41□□□□□ -1.22
CNOT1-219ENST00000569882 FAM50AQ14320 339 aaKnown RBP7.4□□□□□ -1.22
CNOT1-219ENST00000569882 UPF1Q92900 1129 aaKnown RBP eCLIP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms