RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 RIMS2Q9UQ26 1411 aa18.47■□□□□ 0.55
NSMCE1-214ENST00000569236 ZFYVE9O95405 1425 aa18.46■□□□□ 0.55
NSMCE1-214ENST00000569236 ZEB1P37275 1124 aaPredicted RBP18.45■□□□□ 0.54
NSMCE1-214ENST00000569236 PPP1R15AO75807 674 aaPredicted RBP18.45■□□□□ 0.54
NSMCE1-214ENST00000569236 CCDC144AA2RUR9 1427 aa18.45■□□□□ 0.54
NSMCE1-214ENST00000569236 ZNF335Q9H4Z2 1342 aaPredicted RBP18.44■□□□□ 0.54
NSMCE1-214ENST00000569236 ZNF326Q5BKZ1 582 aaKnown RBP18.44■□□□□ 0.54
NSMCE1-214ENST00000569236 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.44■□□□□ 0.54
NSMCE1-214ENST00000569236 LTBP4Q8N2S1 1624 aa18.42■□□□□ 0.54
NSMCE1-214ENST00000569236 BCANQ96GW7 911 aa18.41■□□□□ 0.54
NSMCE1-214ENST00000569236 PLEKHG1Q9ULL1 1385 aa18.4■□□□□ 0.54
NSMCE1-214ENST00000569236 NUTM2DQ5VT03 806 aaPredicted RBP18.4■□□□□ 0.54
NSMCE1-214ENST00000569236 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
NSMCE1-214ENST00000569236 SLC26A8Q96RN1 970 aa18.37■□□□□ 0.53
NSMCE1-214ENST00000569236 SENP3Q9H4L4 574 aaPredicted RBP18.37■□□□□ 0.53
NSMCE1-214ENST00000569236 NEXMIFQ5QGS0 1516 aa18.37■□□□□ 0.53
NSMCE1-214ENST00000569236 CPS1P31327 1500 aa18.35■□□□□ 0.53
NSMCE1-214ENST00000569236 RPGRIP1LQ68CZ1 1315 aa18.34■□□□□ 0.53
NSMCE1-214ENST00000569236 ANKRD30BQ9BXX2 1392 aa18.34■□□□□ 0.53
NSMCE1-214ENST00000569236 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
NSMCE1-214ENST00000569236 STRCP1A6NGW2 1772 aa18.33■□□□□ 0.52
NSMCE1-214ENST00000569236 PPLO60437 1756 aa18.33■□□□□ 0.52
NSMCE1-214ENST00000569236 DIP2AQ14689 1571 aa18.32■□□□□ 0.52
NSMCE1-214ENST00000569236 RGL3Q3MIN7 710 aa18.32■□□□□ 0.52
NSMCE1-214ENST00000569236 IQSEC2Q5JU85 1478 aa18.32■□□□□ 0.52
NSMCE1-214ENST00000569236 ADAMTS13Q76LX8 1427 aa18.31■□□□□ 0.52
NSMCE1-214ENST00000569236 VGFO15240 615 aaPredicted RBP18.31■□□□□ 0.52
NSMCE1-214ENST00000569236 TBX22Q9Y458 520 aa18.31■□□□□ 0.52
NSMCE1-214ENST00000569236 SETBP1Q9Y6X0 1596 aa18.31■□□□□ 0.52
NSMCE1-214ENST00000569236 NRXN3Q9Y4C0 1643 aa18.29■□□□□ 0.52
NSMCE1-214ENST00000569236 KCNA6P17658 529 aa18.28■□□□□ 0.52
NSMCE1-214ENST00000569236 IFT172Q9UG01 1749 aa18.27■□□□□ 0.52
NSMCE1-214ENST00000569236 FBXO41Q8TF61 875 aa18.27■□□□□ 0.52
NSMCE1-214ENST00000569236 CHD2O14647 1828 aaKnown RBP18.27■□□□□ 0.51
NSMCE1-214ENST00000569236 NWD1Q149M9 1564 aa18.26■□□□□ 0.51
NSMCE1-214ENST00000569236 PIK3R4Q99570 1358 aa18.26■□□□□ 0.51
NSMCE1-214ENST00000569236 LRRC7Q96NW7 1537 aa18.26■□□□□ 0.51
NSMCE1-214ENST00000569236 CCER1Q8TC90 406 aaPredicted RBP18.25■□□□□ 0.51
NSMCE1-214ENST00000569236 NKTRP30414 1462 aaKnown RBP18.24■□□□□ 0.51
NSMCE1-214ENST00000569236 ILDR1Q86SU0 546 aaPredicted RBP18.22■□□□□ 0.51
NSMCE1-214ENST00000569236 ADGRF5Q8IZF2 1346 aa18.21■□□□□ 0.51
NSMCE1-214ENST00000569236 DHX57Q6P158 1386 aaKnown RBP18.21■□□□□ 0.51
NSMCE1-214ENST00000569236 ALKQ9UM73 1620 aa18.2■□□□□ 0.5
NSMCE1-214ENST00000569236 METP08581 1390 aa18.2■□□□□ 0.5
NSMCE1-214ENST00000569236 PROSER2Q86WR7 435 aaPredicted RBP18.2■□□□□ 0.5
NSMCE1-214ENST00000569236 XIRP1Q702N8 1843 aaKnown RBP18.2■□□□□ 0.5
NSMCE1-214ENST00000569236 SETD1AO15047 1707 aaKnown RBP18.19■□□□□ 0.5
NSMCE1-214ENST00000569236 MYOM2P54296 1465 aa18.19■□□□□ 0.5
NSMCE1-214ENST00000569236 AMOTL2Q9Y2J4 779 aa18.19■□□□□ 0.5
NSMCE1-214ENST00000569236 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
NSMCE1-214ENST00000569236 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
NSMCE1-214ENST00000569236 PTPRUQ92729 1446 aa18.18■□□□□ 0.5
NSMCE1-214ENST00000569236 UBAP1LF5GYI3 381 aa18.18■□□□□ 0.5
NSMCE1-214ENST00000569236 XRN1Q8IZH2 1706 aaKnown RBP18.17■□□□□ 0.5
NSMCE1-214ENST00000569236 DCAF11Q8TEB1 546 aa18.16■□□□□ 0.5
NSMCE1-214ENST00000569236 RBM33Q96EV2 1170 aaKnown RBP18.16■□□□□ 0.5
NSMCE1-214ENST00000569236 NRXN1Q9ULB1 1477 aa18.16■□□□□ 0.5
NSMCE1-214ENST00000569236 TOM1O60784 492 aa18.15■□□□□ 0.5
NSMCE1-214ENST00000569236 STAC3Q96MF2 364 aa18.14■□□□□ 0.49
NSMCE1-214ENST00000569236 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
NSMCE1-214ENST00000569236 LAMC1P11047 1609 aa18.13■□□□□ 0.49
NSMCE1-214ENST00000569236 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
NSMCE1-214ENST00000569236 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
NSMCE1-214ENST00000569236 C14orf37Q86TY3 774 aa18.11■□□□□ 0.49
NSMCE1-214ENST00000569236 MSH6P52701 1360 aa18.1■□□□□ 0.49
NSMCE1-214ENST00000569236 NEUROD1Q13562 356 aa18.1■□□□□ 0.49
NSMCE1-214ENST00000569236 C14orf93Q9H972 538 aaKnown RBP18.1■□□□□ 0.49
NSMCE1-214ENST00000569236 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
NSMCE1-214ENST00000569236 PIP4K2BP78356 416 aa18.09■□□□□ 0.49
NSMCE1-214ENST00000569236 CFAP70Q5T0N1 1121 aa18.09■□□□□ 0.49
NSMCE1-214ENST00000569236 PTCH1Q13635 1447 aa18.09■□□□□ 0.49
NSMCE1-214ENST00000569236 ASXL1Q8IXJ9 1541 aa18.08■□□□□ 0.49
NSMCE1-214ENST00000569236 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.48
NSMCE1-214ENST00000569236 PRAG1Q86YV5 1406 aa18.07■□□□□ 0.48
NSMCE1-214ENST00000569236 LRPPRCP42704 1394 aaKnown RBP18.06■□□□□ 0.48
NSMCE1-214ENST00000569236 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
NSMCE1-214ENST00000569236 C19orf44Q9H6X5 657 aa18.05■□□□□ 0.48
NSMCE1-214ENST00000569236 STK26Q9P289 416 aa18.05■□□□□ 0.48
NSMCE1-214ENST00000569236 YTHDC2Q9H6S0 1430 aaKnown RBP18.05■□□□□ 0.48
NSMCE1-214ENST00000569236 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.05■□□□□ 0.48
NSMCE1-214ENST00000569236 L3MBTL2Q969R5 705 aa18.04■□□□□ 0.48
NSMCE1-214ENST00000569236 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
NSMCE1-214ENST00000569236 TECPR2O15040 1411 aa18.04■□□□□ 0.48
NSMCE1-214ENST00000569236 ABCC11Q96J66 1382 aa18.03■□□□□ 0.48
NSMCE1-214ENST00000569236 ATF3P18847 181 aa18.02■□□□□ 0.48
NSMCE1-214ENST00000569236 ADGRL3Q9HAR2 1447 aa18.02■□□□□ 0.48
NSMCE1-214ENST00000569236 NALCNQ8IZF0 1738 aa18.02■□□□□ 0.48
NSMCE1-214ENST00000569236 CADPS2Q86UW7 1296 aa18.02■□□□□ 0.47
NSMCE1-214ENST00000569236 ADGRB1O14514 1584 aa18.01■□□□□ 0.47
NSMCE1-214ENST00000569236 DCCP43146 1447 aa18.01■□□□□ 0.47
NSMCE1-214ENST00000569236 KIAA1210Q9ULL0 1709 aa18■□□□□ 0.47
NSMCE1-214ENST00000569236 SLAIN2Q9P270 581 aa17.99■□□□□ 0.47
NSMCE1-214ENST00000569236 CLSPNQ9HAW4 1339 aa17.99■□□□□ 0.47
NSMCE1-214ENST00000569236 TONSLQ96HA7 1378 aa17.99■□□□□ 0.47
NSMCE1-214ENST00000569236 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
NSMCE1-214ENST00000569236 SIRT1Q96EB6 747 aa17.97■□□□□ 0.47
NSMCE1-214ENST00000569236 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
NSMCE1-214ENST00000569236 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
NSMCE1-214ENST00000569236 PLEKHH1Q9ULM0 1364 aa17.96■□□□□ 0.47
NSMCE1-214ENST00000569236 DLC1Q96QB1 1528 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms