RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 NUTM2DQ5VT03 806 aaPredicted RBP18.89■□□□□ 0.61
CDT1-203ENST00000569140 RIMS2Q9UQ26 1411 aa18.89■□□□□ 0.61
CDT1-203ENST00000569140 CCDC144AA2RUR9 1427 aa18.87■□□□□ 0.61
CDT1-203ENST00000569140 MED14O60244 1454 aa18.87■□□□□ 0.61
CDT1-203ENST00000569140 HDGFP51858 240 aaKnown RBP18.87■□□□□ 0.61
CDT1-203ENST00000569140 HRCP23327 699 aa18.86■□□□□ 0.61
CDT1-203ENST00000569140 ZNF335Q9H4Z2 1342 aaPredicted RBP18.85■□□□□ 0.61
CDT1-203ENST00000569140 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.84■□□□□ 0.61
CDT1-203ENST00000569140 ZFYVE9O95405 1425 aa18.83■□□□□ 0.61
CDT1-203ENST00000569140 SLC26A8Q96RN1 970 aa18.8■□□□□ 0.6
CDT1-203ENST00000569140 RGL3Q3MIN7 710 aa18.79■□□□□ 0.6
CDT1-203ENST00000569140 PLEKHG1Q9ULL1 1385 aa18.79■□□□□ 0.6
CDT1-203ENST00000569140 CERKQ8TCT0 537 aa18.78■□□□□ 0.6
CDT1-203ENST00000569140 NEXMIFQ5QGS0 1516 aa18.77■□□□□ 0.6
CDT1-203ENST00000569140 LTBP4Q8N2S1 1624 aa18.77■□□□□ 0.6
CDT1-203ENST00000569140 ANKRD30BQ9BXX2 1392 aa18.74■□□□□ 0.59
CDT1-203ENST00000569140 CPS1P31327 1500 aa18.73■□□□□ 0.59
CDT1-203ENST00000569140 PPLO60437 1756 aa18.72■□□□□ 0.59
CDT1-203ENST00000569140 RPGRIP1LQ68CZ1 1315 aa18.72■□□□□ 0.59
CDT1-203ENST00000569140 PCGF6Q9BYE7 350 aa18.71■□□□□ 0.59
CDT1-203ENST00000569140 SPATA31E1Q6ZUB1 1445 aa18.71■□□□□ 0.59
CDT1-203ENST00000569140 VGFO15240 615 aaPredicted RBP18.7■□□□□ 0.58
CDT1-203ENST00000569140 DIP2AQ14689 1571 aa18.7■□□□□ 0.58
CDT1-203ENST00000569140 STRCP1A6NGW2 1772 aa18.7■□□□□ 0.58
CDT1-203ENST00000569140 ADAMTS13Q76LX8 1427 aa18.68■□□□□ 0.58
CDT1-203ENST00000569140 SETBP1Q9Y6X0 1596 aa18.68■□□□□ 0.58
CDT1-203ENST00000569140 NRXN3Q9Y4C0 1643 aa18.67■□□□□ 0.58
CDT1-203ENST00000569140 TBX22Q9Y458 520 aa18.66■□□□□ 0.58
CDT1-203ENST00000569140 IFT172Q9UG01 1749 aa18.66■□□□□ 0.58
CDT1-203ENST00000569140 KCNA6P17658 529 aa18.65■□□□□ 0.58
CDT1-203ENST00000569140 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
CDT1-203ENST00000569140 NWD1Q149M9 1564 aa18.64■□□□□ 0.57
CDT1-203ENST00000569140 ADGRF5Q8IZF2 1346 aa18.63■□□□□ 0.57
CDT1-203ENST00000569140 IQSEC2Q5JU85 1478 aa18.63■□□□□ 0.57
CDT1-203ENST00000569140 LRRC7Q96NW7 1537 aa18.63■□□□□ 0.57
CDT1-203ENST00000569140 PROSER2Q86WR7 435 aaPredicted RBP18.62■□□□□ 0.57
CDT1-203ENST00000569140 FBXO41Q8TF61 875 aa18.62■□□□□ 0.57
CDT1-203ENST00000569140 KDM2AQ9Y2K7 1162 aa18.62■□□□□ 0.57
CDT1-203ENST00000569140 CHD2O14647 1828 aaKnown RBP18.62■□□□□ 0.57
CDT1-203ENST00000569140 RBM33Q96EV2 1170 aaKnown RBP18.61■□□□□ 0.57
CDT1-203ENST00000569140 ALKQ9UM73 1620 aa18.6■□□□□ 0.57
CDT1-203ENST00000569140 NKTRP30414 1462 aaKnown RBP18.6■□□□□ 0.57
CDT1-203ENST00000569140 METP08581 1390 aa18.6■□□□□ 0.57
CDT1-203ENST00000569140 NEUROD1Q13562 356 aa18.6■□□□□ 0.57
CDT1-203ENST00000569140 DCAF11Q8TEB1 546 aa18.6■□□□□ 0.57
CDT1-203ENST00000569140 PIK3R4Q99570 1358 aa18.59■□□□□ 0.57
CDT1-203ENST00000569140 UBAP1LF5GYI3 381 aa18.59■□□□□ 0.57
CDT1-203ENST00000569140 ILDR1Q86SU0 546 aaPredicted RBP18.59■□□□□ 0.57
CDT1-203ENST00000569140 C14orf37Q86TY3 774 aa18.59■□□□□ 0.57
CDT1-203ENST00000569140 AMOTL2Q9Y2J4 779 aa18.59■□□□□ 0.57
CDT1-203ENST00000569140 MYOM2P54296 1465 aa18.58■□□□□ 0.57
CDT1-203ENST00000569140 TMEM94Q12767 1356 aa18.58■□□□□ 0.57
CDT1-203ENST00000569140 SCAF1Q9H7N4 1312 aaKnown RBP18.58■□□□□ 0.57
CDT1-203ENST00000569140 PTPRUQ92729 1446 aa18.57■□□□□ 0.56
CDT1-203ENST00000569140 SIN3AQ96ST3 1273 aa18.57■□□□□ 0.56
CDT1-203ENST00000569140 PIK3C2GO75747 1445 aa18.57■□□□□ 0.56
CDT1-203ENST00000569140 SETD1AO15047 1707 aaKnown RBP18.56■□□□□ 0.56
CDT1-203ENST00000569140 XIRP1Q702N8 1843 aaKnown RBP18.55■□□□□ 0.56
CDT1-203ENST00000569140 XRN1Q8IZH2 1706 aaKnown RBP18.54■□□□□ 0.56
CDT1-203ENST00000569140 TOM1O60784 492 aa18.54■□□□□ 0.56
CDT1-203ENST00000569140 PIP4K2BP78356 416 aa18.54■□□□□ 0.56
CDT1-203ENST00000569140 STK26Q9P289 416 aa18.52■□□□□ 0.56
CDT1-203ENST00000569140 LAMC1P11047 1609 aa18.52■□□□□ 0.55
CDT1-203ENST00000569140 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.55
CDT1-203ENST00000569140 CFAP70Q5T0N1 1121 aa18.51■□□□□ 0.55
CDT1-203ENST00000569140 TMEM132EQ6IEE7 984 aa18.51■□□□□ 0.55
CDT1-203ENST00000569140 MSH6P52701 1360 aa18.51■□□□□ 0.55
CDT1-203ENST00000569140 ASXL1Q8IXJ9 1541 aa18.48■□□□□ 0.55
CDT1-203ENST00000569140 STAC3Q96MF2 364 aa18.47■□□□□ 0.55
CDT1-203ENST00000569140 C14orf93Q9H972 538 aaKnown RBP18.47■□□□□ 0.55
CDT1-203ENST00000569140 L3MBTL2Q969R5 705 aa18.46■□□□□ 0.55
CDT1-203ENST00000569140 TONSLQ96HA7 1378 aa18.45■□□□□ 0.54
CDT1-203ENST00000569140 ROBO2Q9HCK4 1378 aa18.45■□□□□ 0.54
CDT1-203ENST00000569140 PTCH1Q13635 1447 aa18.45■□□□□ 0.54
CDT1-203ENST00000569140 YTHDC2Q9H6S0 1430 aaKnown RBP18.45■□□□□ 0.54
CDT1-203ENST00000569140 LRPPRCP42704 1394 aaKnown RBP18.44■□□□□ 0.54
CDT1-203ENST00000569140 NCOA3Q9Y6Q9 1424 aa18.44■□□□□ 0.54
CDT1-203ENST00000569140 ATF3P18847 181 aa18.44■□□□□ 0.54
CDT1-203ENST00000569140 KNDC1Q76NI1 1749 aa18.43■□□□□ 0.54
CDT1-203ENST00000569140 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.43■□□□□ 0.54
CDT1-203ENST00000569140 C19orf44Q9H6X5 657 aa18.42■□□□□ 0.54
CDT1-203ENST00000569140 NALCNQ8IZF0 1738 aa18.42■□□□□ 0.54
CDT1-203ENST00000569140 PRAG1Q86YV5 1406 aa18.41■□□□□ 0.54
CDT1-203ENST00000569140 CCER1Q8TC90 406 aaPredicted RBP18.41■□□□□ 0.54
CDT1-203ENST00000569140 ADGRL3Q9HAR2 1447 aa18.4■□□□□ 0.54
CDT1-203ENST00000569140 SAFB2Q14151 953 aaKnown RBP eCLIP18.39■□□□□ 0.53
CDT1-203ENST00000569140 WAPLQ7Z5K2 1190 aa18.39■□□□□ 0.53
CDT1-203ENST00000569140 CADPS2Q86UW7 1296 aa18.39■□□□□ 0.53
CDT1-203ENST00000569140 TRAK1Q9UPV9 953 aa18.39■□□□□ 0.53
CDT1-203ENST00000569140 ABCC11Q96J66 1382 aa18.39■□□□□ 0.53
CDT1-203ENST00000569140 TECPR2O15040 1411 aa18.39■□□□□ 0.53
CDT1-203ENST00000569140 ADGRB1O14514 1584 aa18.38■□□□□ 0.53
CDT1-203ENST00000569140 POGKQ9P215 609 aa18.37■□□□□ 0.53
CDT1-203ENST00000569140 SLAIN2Q9P270 581 aa18.37■□□□□ 0.53
CDT1-203ENST00000569140 PLEKHH1Q9ULM0 1364 aa18.37■□□□□ 0.53
CDT1-203ENST00000569140 KIAA1210Q9ULL0 1709 aa18.37■□□□□ 0.53
CDT1-203ENST00000569140 DCCP43146 1447 aa18.36■□□□□ 0.53
CDT1-203ENST00000569140 PRAM1Q96QH2 718 aa18.36■□□□□ 0.53
CDT1-203ENST00000569140 ROBO1Q9Y6N7 1651 aa18.36■□□□□ 0.53
CDT1-203ENST00000569140 DLC1Q96QB1 1528 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms