RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 TMEM2Q9UHN6 1383 aa20.3■□□□□ 0.84
SPG7-215ENST00000566682 TRPM2O94759 1503 aa20.29■□□□□ 0.84
SPG7-215ENST00000566682 LTKP29376 864 aa20.29■□□□□ 0.84
SPG7-215ENST00000566682 TRIM26Q12899 539 aaPredicted RBP20.29■□□□□ 0.84
SPG7-215ENST00000566682 TXNDC2Q86VQ3 553 aa20.29■□□□□ 0.84
SPG7-215ENST00000566682 CLTCL1P53675 1640 aa20.27■□□□□ 0.84
SPG7-215ENST00000566682 MED14O60244 1454 aa20.27■□□□□ 0.84
SPG7-215ENST00000566682 EID1Q9Y6B2 187 aa20.27■□□□□ 0.84
SPG7-215ENST00000566682 SCAF11Q99590 1463 aaKnown RBP20.26■□□□□ 0.83
SPG7-215ENST00000566682 NPHP4O75161 1426 aaPredicted RBP20.26■□□□□ 0.83
SPG7-215ENST00000566682 KIF1BO60333 1816 aa20.25■□□□□ 0.83
SPG7-215ENST00000566682 IQGAP1P46940 1657 aa20.24■□□□□ 0.83
SPG7-215ENST00000566682 ZFYVE9O95405 1425 aa20.21■□□□□ 0.83
SPG7-215ENST00000566682 RIMS2Q9UQ26 1411 aa20.21■□□□□ 0.83
SPG7-215ENST00000566682 HDGFP51858 240 aaKnown RBP20.21■□□□□ 0.83
SPG7-215ENST00000566682 ZNF326Q5BKZ1 582 aaKnown RBP20.18■□□□□ 0.82
SPG7-215ENST00000566682 RNF39Q9H2S5 420 aa20.18■□□□□ 0.82
SPG7-215ENST00000566682 ZNF335Q9H4Z2 1342 aaPredicted RBP20.18■□□□□ 0.82
SPG7-215ENST00000566682 CCDC144AA2RUR9 1427 aa20.18■□□□□ 0.82
SPG7-215ENST00000566682 NUTM2DQ5VT03 806 aaPredicted RBP20.17■□□□□ 0.82
SPG7-215ENST00000566682 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.17■□□□□ 0.82
SPG7-215ENST00000566682 PPP1R15AO75807 674 aaPredicted RBP20.16■□□□□ 0.82
SPG7-215ENST00000566682 LTBP4Q8N2S1 1624 aa20.15■□□□□ 0.82
SPG7-215ENST00000566682 BCANQ96GW7 911 aa20.14■□□□□ 0.81
SPG7-215ENST00000566682 PLEKHG1Q9ULL1 1385 aa20.13■□□□□ 0.81
SPG7-215ENST00000566682 ANKRD30BQ9BXX2 1392 aa20.12■□□□□ 0.81
SPG7-215ENST00000566682 CERKQ8TCT0 537 aa20.12■□□□□ 0.81
SPG7-215ENST00000566682 SLC26A8Q96RN1 970 aa20.12■□□□□ 0.81
SPG7-215ENST00000566682 NEXMIFQ5QGS0 1516 aa20.11■□□□□ 0.81
SPG7-215ENST00000566682 NCBP3Q53F19 620 aaKnown RBP20.1■□□□□ 0.81
SPG7-215ENST00000566682 RGL3Q3MIN7 710 aa20.09■□□□□ 0.81
SPG7-215ENST00000566682 SPATA31E1Q6ZUB1 1445 aa20.09■□□□□ 0.81
SPG7-215ENST00000566682 STRCP1A6NGW2 1772 aa20.08■□□□□ 0.81
SPG7-215ENST00000566682 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.81
SPG7-215ENST00000566682 PPLO60437 1756 aa20.07■□□□□ 0.8
SPG7-215ENST00000566682 VGFO15240 615 aaPredicted RBP20.05■□□□□ 0.8
SPG7-215ENST00000566682 TBX22Q9Y458 520 aa20.05■□□□□ 0.8
SPG7-215ENST00000566682 ADAMTS13Q76LX8 1427 aa20.04■□□□□ 0.8
SPG7-215ENST00000566682 CPS1P31327 1500 aa20.04■□□□□ 0.8
SPG7-215ENST00000566682 NRXN3Q9Y4C0 1643 aa20.03■□□□□ 0.8
SPG7-215ENST00000566682 IFT172Q9UG01 1749 aa20.02■□□□□ 0.8
SPG7-215ENST00000566682 SETBP1Q9Y6X0 1596 aa20.02■□□□□ 0.8
SPG7-215ENST00000566682 CHD2O14647 1828 aaKnown RBP20.02■□□□□ 0.79
SPG7-215ENST00000566682 DIP2AQ14689 1571 aa20.01■□□□□ 0.79
SPG7-215ENST00000566682 KCNA6P17658 529 aa20.01■□□□□ 0.79
SPG7-215ENST00000566682 PCGF6Q9BYE7 350 aa20■□□□□ 0.79
SPG7-215ENST00000566682 IQSEC2Q5JU85 1478 aa19.99■□□□□ 0.79
SPG7-215ENST00000566682 DHX57Q6P158 1386 aaKnown RBP19.98■□□□□ 0.79
SPG7-215ENST00000566682 ADGRF5Q8IZF2 1346 aa19.98■□□□□ 0.79
SPG7-215ENST00000566682 LRRC7Q96NW7 1537 aa19.97■□□□□ 0.79
SPG7-215ENST00000566682 NWD1Q149M9 1564 aa19.96■□□□□ 0.79
SPG7-215ENST00000566682 FBXO41Q8TF61 875 aa19.96■□□□□ 0.79
SPG7-215ENST00000566682 PIK3R4Q99570 1358 aa19.95■□□□□ 0.79
SPG7-215ENST00000566682 XIRP1Q702N8 1843 aaKnown RBP19.94■□□□□ 0.78
SPG7-215ENST00000566682 ALKQ9UM73 1620 aa19.94■□□□□ 0.78
SPG7-215ENST00000566682 METP08581 1390 aa19.94■□□□□ 0.78
SPG7-215ENST00000566682 SETD1AO15047 1707 aaKnown RBP19.93■□□□□ 0.78
SPG7-215ENST00000566682 PROSER2Q86WR7 435 aaPredicted RBP19.93■□□□□ 0.78
SPG7-215ENST00000566682 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
SPG7-215ENST00000566682 AMOTL2Q9Y2J4 779 aa19.92■□□□□ 0.78
SPG7-215ENST00000566682 NKTRP30414 1462 aaKnown RBP19.92■□□□□ 0.78
SPG7-215ENST00000566682 ILDR1Q86SU0 546 aaPredicted RBP19.91■□□□□ 0.78
SPG7-215ENST00000566682 DCAF11Q8TEB1 546 aa19.91■□□□□ 0.78
SPG7-215ENST00000566682 SIN3AQ96ST3 1273 aa19.91■□□□□ 0.78
SPG7-215ENST00000566682 RBM33Q96EV2 1170 aaKnown RBP19.9■□□□□ 0.78
SPG7-215ENST00000566682 KDM2AQ9Y2K7 1162 aa19.9■□□□□ 0.78
SPG7-215ENST00000566682 MYOM2P54296 1465 aa19.9■□□□□ 0.78
SPG7-215ENST00000566682 PIK3C2GO75747 1445 aa19.89■□□□□ 0.77
SPG7-215ENST00000566682 TMEM94Q12767 1356 aa19.89■□□□□ 0.77
SPG7-215ENST00000566682 NRXN1Q9ULB1 1477 aa19.88■□□□□ 0.77
SPG7-215ENST00000566682 XRN1Q8IZH2 1706 aaKnown RBP19.88■□□□□ 0.77
SPG7-215ENST00000566682 UBAP1LF5GYI3 381 aa19.87■□□□□ 0.77
SPG7-215ENST00000566682 C1QBPQ07021 282 aaKnown RBP19.87■□□□□ 0.77
SPG7-215ENST00000566682 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
SPG7-215ENST00000566682 STAC3Q96MF2 364 aa19.86■□□□□ 0.77
SPG7-215ENST00000566682 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
SPG7-215ENST00000566682 NPM3O75607 178 aaKnown RBP19.84■□□□□ 0.77
SPG7-215ENST00000566682 CFAP70Q5T0N1 1121 aa19.84■□□□□ 0.77
SPG7-215ENST00000566682 TOM1O60784 492 aa19.83■□□□□ 0.77
SPG7-215ENST00000566682 TMEM132EQ6IEE7 984 aa19.83■□□□□ 0.77
SPG7-215ENST00000566682 LAMC1P11047 1609 aa19.81■□□□□ 0.76
SPG7-215ENST00000566682 NCOA3Q9Y6Q9 1424 aa19.81■□□□□ 0.76
SPG7-215ENST00000566682 ASXL1Q8IXJ9 1541 aa19.81■□□□□ 0.76
SPG7-215ENST00000566682 L3MBTL2Q969R5 705 aa19.8■□□□□ 0.76
SPG7-215ENST00000566682 C14orf37Q86TY3 774 aa19.79■□□□□ 0.76
SPG7-215ENST00000566682 STK26Q9P289 416 aa19.78■□□□□ 0.76
SPG7-215ENST00000566682 MSH6P52701 1360 aa19.78■□□□□ 0.76
SPG7-215ENST00000566682 PIP4K2BP78356 416 aa19.77■□□□□ 0.76
SPG7-215ENST00000566682 ROBO2Q9HCK4 1378 aa19.77■□□□□ 0.76
SPG7-215ENST00000566682 PTCH1Q13635 1447 aa19.76■□□□□ 0.75
SPG7-215ENST00000566682 PRAG1Q86YV5 1406 aa19.76■□□□□ 0.75
SPG7-215ENST00000566682 LRPPRCP42704 1394 aaKnown RBP19.76■□□□□ 0.75
SPG7-215ENST00000566682 C19orf44Q9H6X5 657 aa19.76■□□□□ 0.75
SPG7-215ENST00000566682 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.76■□□□□ 0.75
SPG7-215ENST00000566682 YTHDC2Q9H6S0 1430 aaKnown RBP19.76■□□□□ 0.75
SPG7-215ENST00000566682 ABCC11Q96J66 1382 aa19.75■□□□□ 0.75
SPG7-215ENST00000566682 KNDC1Q76NI1 1749 aa19.74■□□□□ 0.75
SPG7-215ENST00000566682 TECPR2O15040 1411 aa19.73■□□□□ 0.75
SPG7-215ENST00000566682 ADGRB1O14514 1584 aa19.72■□□□□ 0.75
SPG7-215ENST00000566682 NALCNQ8IZF0 1738 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms