RNA–Protein interactions for RNA: ENST00000565602.5

EDC3-208, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-208ENST00000565602 STAG3Q9UJ98 1225 aa26.19■■□□□ 1.78
EDC3-208ENST00000565602 ZFYVE9O95405 1425 aa26.19■■□□□ 1.78
EDC3-208ENST00000565602 UHRF1BP1Q6BDS2 1440 aa26.19■■□□□ 1.78
EDC3-208ENST00000565602 RPGRIP1LQ68CZ1 1315 aa26.18■■□□□ 1.78
EDC3-208ENST00000565602 SLIT1O75093 1534 aa26.17■■□□□ 1.78
EDC3-208ENST00000565602 ARHGAP23Q9P227 1491 aa26.16■■□□□ 1.78
EDC3-208ENST00000565602 NRXN1Q9ULB1 1477 aa26.16■■□□□ 1.78
EDC3-208ENST00000565602 KDM2AQ9Y2K7 1162 aa26.16■■□□□ 1.78
EDC3-208ENST00000565602 PRAG1Q86YV5 1406 aa26.15■■□□□ 1.78
EDC3-208ENST00000565602 RIMS2Q9UQ26 1411 aa26.15■■□□□ 1.78
EDC3-208ENST00000565602 TMEM2Q9UHN6 1383 aa26.15■■□□□ 1.78
EDC3-208ENST00000565602 NBPF8Q3BBV2 869 aa26.14■■□□□ 1.78
EDC3-208ENST00000565602 TRPM1Q7Z4N2 1603 aa26.12■■□□□ 1.77
EDC3-208ENST00000565602 ADGRF5Q8IZF2 1346 aa26.11■■□□□ 1.77
EDC3-208ENST00000565602 STAC3Q96MF2 364 aa26.11■■□□□ 1.77
EDC3-208ENST00000565602 NUTM2DQ5VT03 806 aaPredicted RBP26.1■■□□□ 1.77
EDC3-208ENST00000565602 THEMISQ8N1K5 641 aaPredicted RBP26.09■■□□□ 1.77
EDC3-208ENST00000565602 MIER1Q8N108 512 aa26.08■■□□□ 1.77
EDC3-208ENST00000565602 PIK3C2GO75747 1445 aa26.08■■□□□ 1.77
EDC3-208ENST00000565602 LMTK3Q96Q04 1460 aa26.08■■□□□ 1.77
EDC3-208ENST00000565602 KIAA1210Q9ULL0 1709 aa26.08■■□□□ 1.77
EDC3-208ENST00000565602 NRXN3Q9Y4C0 1643 aa26.06■■□□□ 1.76
EDC3-208ENST00000565602 VGFO15240 615 aaPredicted RBP26.05■■□□□ 1.76
EDC3-208ENST00000565602 RALGAPBQ86X10 1494 aa26.05■■□□□ 1.76
EDC3-208ENST00000565602 IQGAP1P46940 1657 aa26.04■■□□□ 1.76
EDC3-208ENST00000565602 POLR1AO95602 1720 aaPredicted RBP26.04■■□□□ 1.76
EDC3-208ENST00000565602 LTKP29376 864 aa26.04■■□□□ 1.76
EDC3-208ENST00000565602 SETD1AO15047 1707 aaKnown RBP26.03■■□□□ 1.76
EDC3-208ENST00000565602 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.02■■□□□ 1.76
EDC3-208ENST00000565602 SCAF11Q99590 1463 aaKnown RBP26.02■■□□□ 1.76
EDC3-208ENST00000565602 SETBP1Q9Y6X0 1596 aa26.02■■□□□ 1.76
EDC3-208ENST00000565602 LAMC1P11047 1609 aa26.02■■□□□ 1.76
EDC3-208ENST00000565602 HIRIP3Q9BW71 556 aaPredicted RBP26■■□□□ 1.75
EDC3-208ENST00000565602 TXNDC2Q86VQ3 553 aa25.99■■□□□ 1.75
EDC3-208ENST00000565602 HDGFP51858 240 aaKnown RBP25.98■■□□□ 1.75
EDC3-208ENST00000565602 ALKQ9UM73 1620 aa25.97■■□□□ 1.75
EDC3-208ENST00000565602 PLEKHG1Q9ULL1 1385 aa25.97■■□□□ 1.75
EDC3-208ENST00000565602 EID1Q9Y6B2 187 aa25.96■■□□□ 1.75
EDC3-208ENST00000565602 ASXL1Q8IXJ9 1541 aa25.95■■□□□ 1.75
EDC3-208ENST00000565602 CFAP70Q5T0N1 1121 aa25.95■■□□□ 1.74
EDC3-208ENST00000565602 C14orf93Q9H972 538 aaKnown RBP25.95■■□□□ 1.74
EDC3-208ENST00000565602 ADGRB1O14514 1584 aa25.94■■□□□ 1.74
EDC3-208ENST00000565602 HSPA5P11021 654 aaKnown RBP25.94■■□□□ 1.74
EDC3-208ENST00000565602 EIF4G2P78344 907 aaKnown RBP eCLIP25.94■■□□□ 1.74
EDC3-208ENST00000565602 NBPF1Q3BBV0 1214 aa25.94■■□□□ 1.74
EDC3-208ENST00000565602 GPRASP1Q5JY77 1395 aa25.94■■□□□ 1.74
EDC3-208ENST00000565602 SENP3Q9H4L4 574 aaPredicted RBP25.94■■□□□ 1.74
EDC3-208ENST00000565602 ADAMTS13Q76LX8 1427 aa25.93■■□□□ 1.74
EDC3-208ENST00000565602 STRCQ7RTU9 1775 aa25.92■■□□□ 1.74
EDC3-208ENST00000565602 HSPA2P54652 639 aa25.92■■□□□ 1.74
EDC3-208ENST00000565602 MED14O60244 1454 aa25.92■■□□□ 1.74
EDC3-208ENST00000565602 ANKLE2Q86XL3 938 aa25.91■■□□□ 1.74
EDC3-208ENST00000565602 ROCK2O75116 1388 aaKnown RBP25.91■■□□□ 1.74
EDC3-208ENST00000565602 DDX10Q13206 875 aaKnown RBP25.89■■□□□ 1.73
EDC3-208ENST00000565602 DIP2AQ14689 1571 aa25.88■■□□□ 1.73
EDC3-208ENST00000565602 NCKAP5LQ9HCH0 1330 aa25.87■■□□□ 1.73
EDC3-208ENST00000565602 NPHP4O75161 1426 aaPredicted RBP25.85■■□□□ 1.73
EDC3-208ENST00000565602 CARD11Q9BXL7 1154 aa25.83■■□□□ 1.73
EDC3-208ENST00000565602 METP08581 1390 aa25.83■■□□□ 1.73
EDC3-208ENST00000565602 TMEM132EQ6IEE7 984 aa25.83■■□□□ 1.72
EDC3-208ENST00000565602 SLC26A8Q96RN1 970 aa25.81■■□□□ 1.72
EDC3-208ENST00000565602 ARHGEF28Q8N1W1 1705 aaKnown RBP25.8■■□□□ 1.72
EDC3-208ENST00000565602 BCANQ96GW7 911 aa25.8■■□□□ 1.72
EDC3-208ENST00000565602 USP47Q96K76 1375 aa25.79■■□□□ 1.72
EDC3-208ENST00000565602 KNDC1Q76NI1 1749 aa25.79■■□□□ 1.72
EDC3-208ENST00000565602 TBX22Q9Y458 520 aa25.79■■□□□ 1.72
EDC3-208ENST00000565602 YTHDC2Q9H6S0 1430 aaKnown RBP25.78■■□□□ 1.72
EDC3-208ENST00000565602 WASHC2AQ641Q2 1341 aa25.77■■□□□ 1.72
EDC3-208ENST00000565602 CHD2O14647 1828 aaKnown RBP25.77■■□□□ 1.72
EDC3-208ENST00000565602 PTPRUQ92729 1446 aa25.75■■□□□ 1.71
EDC3-208ENST00000565602 XRN1Q8IZH2 1706 aaKnown RBP25.75■■□□□ 1.71
EDC3-208ENST00000565602 CENPBP07199 599 aaPredicted RBP25.74■■□□□ 1.71
EDC3-208ENST00000565602 LRPPRCP42704 1394 aaKnown RBP25.74■■□□□ 1.71
EDC3-208ENST00000565602 CCDC7Q96M83 1385 aa25.73■■□□□ 1.71
EDC3-208ENST00000565602 CPS1P31327 1500 aa25.71■■□□□ 1.71
EDC3-208ENST00000565602 DLC1Q96QB1 1528 aa25.71■■□□□ 1.71
EDC3-208ENST00000565602 PIK3R4Q99570 1358 aa25.71■■□□□ 1.71
EDC3-208ENST00000565602 TECPR2O15040 1411 aa25.71■■□□□ 1.71
EDC3-208ENST00000565602 YTHDC1Q96MU7 727 aaKnown RBP25.7■■□□□ 1.7
EDC3-208ENST00000565602 TRAK1Q9UPV9 953 aa25.7■■□□□ 1.7
EDC3-208ENST00000565602 ABCC11Q96J66 1382 aa25.69■■□□□ 1.7
EDC3-208ENST00000565602 QRICH2Q9H0J4 1663 aa25.68■■□□□ 1.7
EDC3-208ENST00000565602 STK26Q9P289 416 aa25.68■■□□□ 1.7
EDC3-208ENST00000565602 NWD1Q149M9 1564 aa25.68■■□□□ 1.7
EDC3-208ENST00000565602 STRCP1A6NGW2 1772 aa25.67■■□□□ 1.7
EDC3-208ENST00000565602 ST20-MTHFSA0A0A6YYL1 179 aa25.66■■□□□ 1.7
EDC3-208ENST00000565602 EIF3AQ14152 1382 aaKnown RBP25.66■■□□□ 1.7
EDC3-208ENST00000565602 C11orf95C9JLR9 678 aaPredicted RBP25.64■■□□□ 1.7
EDC3-208ENST00000565602 ANP32CO43423 234 aa25.64■■□□□ 1.7
EDC3-208ENST00000565602 AEBP2Q6ZN18 517 aaPredicted RBP25.64■■□□□ 1.7
EDC3-208ENST00000565602 ROBO2Q9HCK4 1378 aa25.63■■□□□ 1.69
EDC3-208ENST00000565602 KIF7Q2M1P5 1343 aa25.62■■□□□ 1.69
EDC3-208ENST00000565602 AMOTL2Q9Y2J4 779 aa25.62■■□□□ 1.69
EDC3-208ENST00000565602 PTCH1Q13635 1447 aa25.62■■□□□ 1.69
EDC3-208ENST00000565602 TESK2Q96S53 571 aa25.61■■□□□ 1.69
EDC3-208ENST00000565602 FAM135BQ49AJ0 1406 aa25.61■■□□□ 1.69
EDC3-208ENST00000565602 PLEKHH1Q9ULM0 1364 aa25.6■■□□□ 1.69
EDC3-208ENST00000565602 CENPJQ9HC77 1338 aaPredicted RBP25.59■■□□□ 1.69
EDC3-208ENST00000565602 SIRT1Q96EB6 747 aa25.59■■□□□ 1.69
EDC3-208ENST00000565602 KCNA6P17658 529 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms