RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 NEURL4Q96JN8 1562 aa18.62■□□□□ 0.57
SPG7-209ENST00000564047 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
SPG7-209ENST00000564047 CFAP65Q6ZU64 1925 aaKnown RBP18.59■□□□□ 0.57
SPG7-209ENST00000564047 L3MBTL2Q969R5 705 aa18.59■□□□□ 0.57
SPG7-209ENST00000564047 CPS1P31327 1500 aa18.58■□□□□ 0.56
SPG7-209ENST00000564047 NLRP1Q9C000 1473 aa18.58■□□□□ 0.56
SPG7-209ENST00000564047 ADGRB3O60242 1522 aa18.57■□□□□ 0.56
SPG7-209ENST00000564047 CHGAP10645 457 aaKnown RBP18.56■□□□□ 0.56
SPG7-209ENST00000564047 RGL3Q3MIN7 710 aa18.56■□□□□ 0.56
SPG7-209ENST00000564047 POLR1AO95602 1720 aaPredicted RBP18.55■□□□□ 0.56
SPG7-209ENST00000564047 KIF1BO60333 1816 aa18.55■□□□□ 0.56
SPG7-209ENST00000564047 PPP1R15AO75807 674 aaPredicted RBP18.54■□□□□ 0.56
SPG7-209ENST00000564047 A2ML1A8K2U0 1454 aa18.53■□□□□ 0.56
SPG7-209ENST00000564047 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
SPG7-209ENST00000564047 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
SPG7-209ENST00000564047 TMEM131LA2VDJ0 1609 aa18.52■□□□□ 0.56
SPG7-209ENST00000564047 RPGRIP1LQ68CZ1 1315 aa18.52■□□□□ 0.56
SPG7-209ENST00000564047 ZNF326Q5BKZ1 582 aaKnown RBP18.51■□□□□ 0.55
SPG7-209ENST00000564047 DCAF11Q8TEB1 546 aa18.51■□□□□ 0.55
SPG7-209ENST00000564047 KDM5AP29375 1690 aaKnown RBP18.49■□□□□ 0.55
SPG7-209ENST00000564047 KDM2AQ9Y2K7 1162 aa18.47■□□□□ 0.55
SPG7-209ENST00000564047 MYOM2P54296 1465 aa18.46■□□□□ 0.54
SPG7-209ENST00000564047 THEMISQ8N1K5 641 aaPredicted RBP18.45■□□□□ 0.54
SPG7-209ENST00000564047 UBR1Q8IWV7 1749 aa18.45■□□□□ 0.54
SPG7-209ENST00000564047 NEXMIFQ5QGS0 1516 aa18.44■□□□□ 0.54
SPG7-209ENST00000564047 ZFYVE9O95405 1425 aa18.43■□□□□ 0.54
SPG7-209ENST00000564047 PRAG1Q86YV5 1406 aa18.43■□□□□ 0.54
SPG7-209ENST00000564047 VGFO15240 615 aaPredicted RBP18.43■□□□□ 0.54
SPG7-209ENST00000564047 HDGFP51858 240 aaKnown RBP18.43■□□□□ 0.54
SPG7-209ENST00000564047 NBPF8Q3BBV2 869 aa18.43■□□□□ 0.54
SPG7-209ENST00000564047 ANKLE2Q86XL3 938 aa18.43■□□□□ 0.54
SPG7-209ENST00000564047 IFT172Q9UG01 1749 aa18.43■□□□□ 0.54
SPG7-209ENST00000564047 TMEM2Q9UHN6 1383 aa18.42■□□□□ 0.54
SPG7-209ENST00000564047 RIMS2Q9UQ26 1411 aa18.42■□□□□ 0.54
SPG7-209ENST00000564047 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.42■□□□□ 0.54
SPG7-209ENST00000564047 NRXN1Q9ULB1 1477 aa18.41■□□□□ 0.54
SPG7-209ENST00000564047 PPLO60437 1756 aa18.4■□□□□ 0.54
SPG7-209ENST00000564047 MYO5BQ9ULV0 1848 aa18.4■□□□□ 0.54
SPG7-209ENST00000564047 ALKQ9UM73 1620 aa18.4■□□□□ 0.54
SPG7-209ENST00000564047 ADGRF5Q8IZF2 1346 aa18.4■□□□□ 0.54
SPG7-209ENST00000564047 ARHGAP23Q9P227 1491 aa18.39■□□□□ 0.54
SPG7-209ENST00000564047 SLIT1O75093 1534 aa18.39■□□□□ 0.54
SPG7-209ENST00000564047 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
SPG7-209ENST00000564047 NPHP4O75161 1426 aaPredicted RBP18.37■□□□□ 0.53
SPG7-209ENST00000564047 MED14O60244 1454 aa18.36■□□□□ 0.53
SPG7-209ENST00000564047 PIK3C2GO75747 1445 aa18.36■□□□□ 0.53
SPG7-209ENST00000564047 NUTM2DQ5VT03 806 aaPredicted RBP18.36■□□□□ 0.53
SPG7-209ENST00000564047 RALGAPBQ86X10 1494 aa18.36■□□□□ 0.53
SPG7-209ENST00000564047 EID1Q9Y6B2 187 aa18.36■□□□□ 0.53
SPG7-209ENST00000564047 IQGAP1P46940 1657 aa18.35■□□□□ 0.53
SPG7-209ENST00000564047 TXNDC2Q86VQ3 553 aa18.34■□□□□ 0.53
SPG7-209ENST00000564047 LTKP29376 864 aa18.33■□□□□ 0.52
SPG7-209ENST00000564047 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
SPG7-209ENST00000564047 PLEKHG1Q9ULL1 1385 aa18.31■□□□□ 0.52
SPG7-209ENST00000564047 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
SPG7-209ENST00000564047 CFAP70Q5T0N1 1121 aa18.31■□□□□ 0.52
SPG7-209ENST00000564047 LRRC7Q96NW7 1537 aa18.31■□□□□ 0.52
SPG7-209ENST00000564047 STRCP1A6NGW2 1772 aa18.31■□□□□ 0.52
SPG7-209ENST00000564047 SCAF11Q99590 1463 aaKnown RBP18.31■□□□□ 0.52
SPG7-209ENST00000564047 ROCK2O75116 1388 aaKnown RBP18.3■□□□□ 0.52
SPG7-209ENST00000564047 GPRASP1Q5JY77 1395 aa18.3■□□□□ 0.52
SPG7-209ENST00000564047 KIAA1210Q9ULL0 1709 aa18.3■□□□□ 0.52
SPG7-209ENST00000564047 RGS17Q9UGC6 210 aaPredicted RBP18.3■□□□□ 0.52
SPG7-209ENST00000564047 NBPF1Q3BBV0 1214 aa18.29■□□□□ 0.52
SPG7-209ENST00000564047 SETBP1Q9Y6X0 1596 aa18.28■□□□□ 0.52
SPG7-209ENST00000564047 LAMC1P11047 1609 aa18.27■□□□□ 0.52
SPG7-209ENST00000564047 CARD11Q9BXL7 1154 aa18.27■□□□□ 0.52
SPG7-209ENST00000564047 BCANQ96GW7 911 aa18.24■□□□□ 0.51
SPG7-209ENST00000564047 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
SPG7-209ENST00000564047 NRXN3Q9Y4C0 1643 aa18.23■□□□□ 0.51
SPG7-209ENST00000564047 ADGRB1O14514 1584 aa18.23■□□□□ 0.51
SPG7-209ENST00000564047 EIF4G2P78344 907 aaKnown RBP eCLIP18.23■□□□□ 0.51
SPG7-209ENST00000564047 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
SPG7-209ENST00000564047 USP47Q96K76 1375 aa18.2■□□□□ 0.5
SPG7-209ENST00000564047 TMEM132EQ6IEE7 984 aa18.2■□□□□ 0.5
SPG7-209ENST00000564047 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
SPG7-209ENST00000564047 ASXL1Q8IXJ9 1541 aa18.19■□□□□ 0.5
SPG7-209ENST00000564047 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
SPG7-209ENST00000564047 HSPA5P11021 654 aaKnown RBP18.18■□□□□ 0.5
SPG7-209ENST00000564047 POTEAQ6S8J7 498 aa18.18■□□□□ 0.5
SPG7-209ENST00000564047 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
SPG7-209ENST00000564047 METP08581 1390 aa18.17■□□□□ 0.5
SPG7-209ENST00000564047 XIRP1Q702N8 1843 aaKnown RBP18.17■□□□□ 0.5
SPG7-209ENST00000564047 YTHDC2Q9H6S0 1430 aaKnown RBP18.16■□□□□ 0.5
SPG7-209ENST00000564047 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
SPG7-209ENST00000564047 EIF3AQ14152 1382 aaKnown RBP18.16■□□□□ 0.5
SPG7-209ENST00000564047 PIK3R4Q99570 1358 aa18.16■□□□□ 0.5
SPG7-209ENST00000564047 FAM135BQ49AJ0 1406 aa18.15■□□□□ 0.5
SPG7-209ENST00000564047 ABCC11Q96J66 1382 aa18.14■□□□□ 0.49
SPG7-209ENST00000564047 ZNF316A6NFI3 1004 aaPredicted RBP18.13■□□□□ 0.49
SPG7-209ENST00000564047 TRAK1Q9UPV9 953 aa18.13■□□□□ 0.49
SPG7-209ENST00000564047 ST20-MTHFSA0A0A6YYL1 179 aa18.12■□□□□ 0.49
SPG7-209ENST00000564047 STK26Q9P289 416 aa18.12■□□□□ 0.49
SPG7-209ENST00000564047 SIRT1Q96EB6 747 aa18.11■□□□□ 0.49
SPG7-209ENST00000564047 TECPR2O15040 1411 aa18.11■□□□□ 0.49
SPG7-209ENST00000564047 DLC1Q96QB1 1528 aa18.11■□□□□ 0.49
SPG7-209ENST00000564047 HIRIP3Q9BW71 556 aaPredicted RBP18.1■□□□□ 0.49
SPG7-209ENST00000564047 PTPRUQ92729 1446 aa18.09■□□□□ 0.49
SPG7-209ENST00000564047 ROBO1Q9Y6N7 1651 aa18.09■□□□□ 0.49
SPG7-209ENST00000564047 CENPJQ9HC77 1338 aaPredicted RBP18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms