RNA–Protein interactions for RNA: ENST00000563825.1

AC009117.3-202, humanhuman

TSL 4 BASIC

Gene AC009117.3, Length 557 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009117.3-202ENST00000563825 RAB3GAP2Q9H2M9 1393 aa8□□□□□ -1.13
AC009117.3-202ENST00000563825 MLLT3P42568 568 aaPredicted RBP8□□□□□ -1.13
AC009117.3-202ENST00000563825 NBR1Q14596 966 aa8□□□□□ -1.13
AC009117.3-202ENST00000563825 TSR1Q2NL82 804 aaKnown RBP8□□□□□ -1.13
AC009117.3-202ENST00000563825 LRRC9Q6ZRR7 1453 aa8□□□□□ -1.13
AC009117.3-202ENST00000563825 EN1Q05925 392 aaPredicted RBP7.99□□□□□ -1.13
AC009117.3-202ENST00000563825 PROX2Q3B8N5 592 aa7.99□□□□□ -1.13
AC009117.3-202ENST00000563825 KCNH8Q96L42 1107 aa7.99□□□□□ -1.13
AC009117.3-202ENST00000563825 AQRO60306 1485 aaKnown RBP eCLIP7.99□□□□□ -1.13
AC009117.3-202ENST00000563825 PPP1R3GB7ZBB8 358 aa7.98□□□□□ -1.13
AC009117.3-202ENST00000563825 TIAM1Q13009 1591 aa7.97□□□□□ -1.13
AC009117.3-202ENST00000563825 FGD5Q6ZNL6 1462 aa7.96□□□□□ -1.13
AC009117.3-202ENST00000563825 SEMA3EO15041 775 aa7.96□□□□□ -1.14
AC009117.3-202ENST00000563825 MAP3K7O43318 606 aa7.96□□□□□ -1.14
AC009117.3-202ENST00000563825 ITGAEP38570 1179 aa7.96□□□□□ -1.14
AC009117.3-202ENST00000563825 CASKIN1Q8WXD9 1431 aa7.95□□□□□ -1.14
AC009117.3-202ENST00000563825 CCER2I3L3R5 266 aa7.95□□□□□ -1.14
AC009117.3-202ENST00000563825 PPP1R15AO75807 674 aaPredicted RBP7.95□□□□□ -1.14
AC009117.3-202ENST00000563825 FAM50AQ14320 339 aaKnown RBP7.95□□□□□ -1.14
AC009117.3-202ENST00000563825 HCSTQ9UBK5 93 aa7.95□□□□□ -1.14
AC009117.3-202ENST00000563825 PHLDB1Q86UU1 1377 aa7.95□□□□□ -1.14
AC009117.3-202ENST00000563825 EFCAB5A4FU69 1503 aa7.94□□□□□ -1.14
AC009117.3-202ENST00000563825 ABCA10Q8WWZ4 1543 aa7.94□□□□□ -1.14
AC009117.3-202ENST00000563825 KIAA1468Q9P260 1216 aa7.94□□□□□ -1.14
AC009117.3-202ENST00000563825 SUPT16HQ9Y5B9 1047 aaKnown RBP7.94□□□□□ -1.14
AC009117.3-202ENST00000563825 FMN1Q68DA7 1419 aa7.94□□□□□ -1.14
AC009117.3-202ENST00000563825 FYCO1Q9BQS8 1478 aa7.94□□□□□ -1.14
AC009117.3-202ENST00000563825 FANCD2Q9BXW9 1451 aa7.94□□□□□ -1.14
AC009117.3-202ENST00000563825 STAC3Q96MF2 364 aa7.93□□□□□ -1.14
AC009117.3-202ENST00000563825 CDHR5Q9HBB8 845 aa7.93□□□□□ -1.14
AC009117.3-202ENST00000563825 NPDC1Q9NQX5 325 aaPredicted RBP7.93□□□□□ -1.14
AC009117.3-202ENST00000563825 RABGEF1Q9UJ41 708 aa7.93□□□□□ -1.14
AC009117.3-202ENST00000563825 ONECUT3O60422 494 aaPredicted RBP7.92□□□□□ -1.14
AC009117.3-202ENST00000563825 FAM198AQ9UFP1 575 aa7.92□□□□□ -1.14
AC009117.3-202ENST00000563825 TSKSQ9UJT2 592 aa7.92□□□□□ -1.14
AC009117.3-202ENST00000563825 MAPKBP1O60336 1514 aa7.92□□□□□ -1.14
AC009117.3-202ENST00000563825 TRIM6-TRIM34B2RNG4 842 aa7.91□□□□□ -1.14
AC009117.3-202ENST00000563825 KCTD12Q96CX2 325 aaKnown RBP7.91□□□□□ -1.14
AC009117.3-202ENST00000563825 PRDM2Q13029 1718 aa7.9□□□□□ -1.14
AC009117.3-202ENST00000563825 DNMBPQ6XZF7 1577 aa7.9□□□□□ -1.14
AC009117.3-202ENST00000563825 C3orf80F5H4A9 247 aa7.9□□□□□ -1.14
AC009117.3-202ENST00000563825 MRPL50Q8N5N7 158 aaKnown RBP7.9□□□□□ -1.14
AC009117.3-202ENST00000563825 ANP32CO43423 234 aa7.89□□□□□ -1.15
AC009117.3-202ENST00000563825 PRSS12P56730 875 aa7.89□□□□□ -1.15
AC009117.3-202ENST00000563825 CDCA7LQ96GN5 454 aa7.89□□□□□ -1.15
AC009117.3-202ENST00000563825 SIN3AQ96ST3 1273 aa7.89□□□□□ -1.15
AC009117.3-202ENST00000563825 ATP1B4Q9UN42 357 aaPredicted RBP7.89□□□□□ -1.15
AC009117.3-202ENST00000563825 TESPA1A2RU30 521 aaPredicted RBP7.88□□□□□ -1.15
AC009117.3-202ENST00000563825 DDX10Q13206 875 aaKnown RBP7.88□□□□□ -1.15
AC009117.3-202ENST00000563825 TOPBP1Q92547 1522 aa7.88□□□□□ -1.15
AC009117.3-202ENST00000563825 POLA1P09884 1462 aaPredicted RBP7.87□□□□□ -1.15
AC009117.3-202ENST00000563825 FHOD3Q2V2M9 1422 aa7.87□□□□□ -1.15
AC009117.3-202ENST00000563825 FGD6Q6ZV73 1430 aa7.87□□□□□ -1.15
AC009117.3-202ENST00000563825 MTUS2Q5JR59 1369 aa7.87□□□□□ -1.15
AC009117.3-202ENST00000563825 SEPT9Q9UHD8 586 aaPredicted RBP7.87□□□□□ -1.15
AC009117.3-202ENST00000563825 CC2D2AQ9P2K1 1620 aa7.87□□□□□ -1.15
AC009117.3-202ENST00000563825 HFM1A2PYH4 1435 aa7.86□□□□□ -1.15
AC009117.3-202ENST00000563825 UACAQ9BZF9 1416 aa7.86□□□□□ -1.15
AC009117.3-202ENST00000563825 TONSLQ96HA7 1378 aa7.86□□□□□ -1.15
AC009117.3-202ENST00000563825 NEFLP07196 543 aa7.86□□□□□ -1.15
AC009117.3-202ENST00000563825 CERKQ8TCT0 537 aa7.86□□□□□ -1.15
AC009117.3-202ENST00000563825 NBPF3Q9H094 633 aa7.86□□□□□ -1.15
AC009117.3-202ENST00000563825 CUL7Q14999 1698 aa7.86□□□□□ -1.15
AC009117.3-202ENST00000563825 GOLGA8CPA6NN73 597 aa7.85□□□□□ -1.15
AC009117.3-202ENST00000563825 SMAPO00193 183 aa7.85□□□□□ -1.15
AC009117.3-202ENST00000563825 PTPN5P54829 565 aa7.85□□□□□ -1.15
AC009117.3-202ENST00000563825 PACS2Q86VP3 889 aa7.85□□□□□ -1.15
AC009117.3-202ENST00000563825 WNT2BQ93097 391 aa7.85□□□□□ -1.15
AC009117.3-202ENST00000563825 RAD54L2Q9Y4B4 1467 aa7.85□□□□□ -1.15
AC009117.3-202ENST00000563825 CFAP43Q8NDM7 1665 aa7.85□□□□□ -1.15
AC009117.3-202ENST00000563825 RBM26Q5T8P6 1007 aaKnown RBP7.84□□□□□ -1.15
AC009117.3-202ENST00000563825 THSD4Q6ZMP0 1018 aa7.84□□□□□ -1.15
AC009117.3-202ENST00000563825 LAPTM4BQ86VI4 370 aa7.84□□□□□ -1.15
AC009117.3-202ENST00000563825 TTC13Q8NBP0 860 aa7.84□□□□□ -1.15
AC009117.3-202ENST00000563825 ZFRQ96KR1 1074 aaKnown RBP7.84□□□□□ -1.15
AC009117.3-202ENST00000563825 PDS5BQ9NTI5 1447 aa7.84□□□□□ -1.15
AC009117.3-202ENST00000563825 PCF11O94913 1555 aaKnown RBP7.84□□□□□ -1.15
AC009117.3-202ENST00000563825 PTGDRQ13258 359 aa7.83□□□□□ -1.16
AC009117.3-202ENST00000563825 TATDN2Q93075 761 aa7.83□□□□□ -1.16
AC009117.3-202ENST00000563825 MYOM3Q5VTT5 1437 aa7.83□□□□□ -1.16
AC009117.3-202ENST00000563825 THOC2Q8NI27 1593 aaKnown RBP7.83□□□□□ -1.16
AC009117.3-202ENST00000563825 WDR97A6NE52 1622 aa7.82□□□□□ -1.16
AC009117.3-202ENST00000563825 NUTM2FA1L443 756 aa7.82□□□□□ -1.16
AC009117.3-202ENST00000563825 ERICH6BQ5W0A0 696 aa7.82□□□□□ -1.16
AC009117.3-202ENST00000563825 PADI6Q6TGC4 694 aa7.82□□□□□ -1.16
AC009117.3-202ENST00000563825 AKNAQ7Z591 1439 aa7.82□□□□□ -1.16
AC009117.3-202ENST00000563825 SNAPC4Q5SXM2 1469 aa7.81□□□□□ -1.16
AC009117.3-202ENST00000563825 NAIPQ13075 1403 aa7.81□□□□□ -1.16
AC009117.3-202ENST00000563825 FAM98CQ17RN3 349 aaKnown RBP7.81□□□□□ -1.16
AC009117.3-202ENST00000563825 NUDT18Q6ZVK8 323 aa7.81□□□□□ -1.16
AC009117.3-202ENST00000563825 GAPVD1Q14C86 1478 aa7.81□□□□□ -1.16
AC009117.3-202ENST00000563825 CCDC18Q5T9S5 1454 aa7.81□□□□□ -1.16
AC009117.3-202ENST00000563825 BCAMP50895 628 aa7.8□□□□□ -1.16
AC009117.3-202ENST00000563825 PNMA3Q9UL41 463 aa7.8□□□□□ -1.16
AC009117.3-202ENST00000563825 GRIN2BQ13224 1484 aa7.8□□□□□ -1.16
AC009117.3-202ENST00000563825 NCOA2Q15596 1464 aa7.8□□□□□ -1.16
AC009117.3-202ENST00000563825 LAMC3Q9Y6N6 1575 aa7.8□□□□□ -1.16
AC009117.3-202ENST00000563825 MIA2Q96PC5 1412 aa7.79□□□□□ -1.16
AC009117.3-202ENST00000563825 SOWAHBA6NEL2 793 aa7.79□□□□□ -1.16
AC009117.3-202ENST00000563825 TULP1O00294 542 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms