RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 EID1Q9Y6B2 187 aa18.56■□□□□ 0.56
HDGFL3-204ENST00000563790 ERVK-7P63135 1459 aa18.55■□□□□ 0.56
HDGFL3-204ENST00000563790 RTEL1-TNFRSF6BF6WH68 1400 aa18.55■□□□□ 0.56
HDGFL3-204ENST00000563790 HNRNPMP52272 730 aaKnown RBP eCLIP18.54■□□□□ 0.56
HDGFL3-204ENST00000563790 PCDH10Q9P2E7 1040 aa18.54■□□□□ 0.56
HDGFL3-204ENST00000563790 KIAA1107Q9UPP5 1409 aa18.53■□□□□ 0.56
HDGFL3-204ENST00000563790 NCOA3Q9Y6Q9 1424 aa18.52■□□□□ 0.56
HDGFL3-204ENST00000563790 DHX29Q7Z478 1369 aaKnown RBP18.52■□□□□ 0.55
HDGFL3-204ENST00000563790 PNPLA6Q8IY17 1366 aa18.52■□□□□ 0.55
HDGFL3-204ENST00000563790 CAMSAP2Q08AD1 1489 aa18.52■□□□□ 0.55
HDGFL3-204ENST00000563790 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
HDGFL3-204ENST00000563790 BRINP3Q76B58 766 aa18.5■□□□□ 0.55
HDGFL3-204ENST00000563790 FNBP4Q8N3X1 1017 aaPredicted RBP18.5■□□□□ 0.55
HDGFL3-204ENST00000563790 LRRC59Q96AG4 307 aaKnown RBP18.49■□□□□ 0.55
HDGFL3-204ENST00000563790 MARF1Q9Y4F3 1742 aaKnown RBP18.49■□□□□ 0.55
HDGFL3-204ENST00000563790 ASXL1Q8IXJ9 1541 aa18.49■□□□□ 0.55
HDGFL3-204ENST00000563790 PLEKHH2Q8IVE3 1493 aa18.48■□□□□ 0.55
HDGFL3-204ENST00000563790 KIF3BO15066 747 aa18.48■□□□□ 0.55
HDGFL3-204ENST00000563790 ADAMTS2O95450 1211 aa18.48■□□□□ 0.55
HDGFL3-204ENST00000563790 R3HDM1Q15032 1099 aaKnown RBP18.48■□□□□ 0.55
HDGFL3-204ENST00000563790 CADPS2Q86UW7 1296 aa18.48■□□□□ 0.55
HDGFL3-204ENST00000563790 SLC26A8Q96RN1 970 aa18.47■□□□□ 0.55
HDGFL3-204ENST00000563790 ZNF777Q9ULD5 760 aaPredicted RBP18.47■□□□□ 0.55
HDGFL3-204ENST00000563790 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.46■□□□□ 0.55
HDGFL3-204ENST00000563790 TMEM2Q9UHN6 1383 aa18.46■□□□□ 0.55
HDGFL3-204ENST00000563790 PIK3C2BO00750 1634 aa18.45■□□□□ 0.54
HDGFL3-204ENST00000563790 NINLQ9Y2I6 1382 aa18.44■□□□□ 0.54
HDGFL3-204ENST00000563790 ATP1B4Q9UN42 357 aaPredicted RBP18.44■□□□□ 0.54
HDGFL3-204ENST00000563790 ARHGAP35Q9NRY4 1499 aa18.43■□□□□ 0.54
HDGFL3-204ENST00000563790 BAG6P46379 1132 aa18.42■□□□□ 0.54
HDGFL3-204ENST00000563790 PTCH1Q13635 1447 aa18.41■□□□□ 0.54
HDGFL3-204ENST00000563790 EHMT2Q96KQ7 1210 aa18.41■□□□□ 0.54
HDGFL3-204ENST00000563790 RGPD1P0DJD0 1748 aa18.4■□□□□ 0.54
HDGFL3-204ENST00000563790 GLI3P10071 1580 aa18.4■□□□□ 0.54
HDGFL3-204ENST00000563790 ATF3P18847 181 aa18.4■□□□□ 0.54
HDGFL3-204ENST00000563790 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
HDGFL3-204ENST00000563790 RALGAPBQ86X10 1494 aa18.39■□□□□ 0.54
HDGFL3-204ENST00000563790 GJD4Q96KN9 370 aaPredicted RBP18.39■□□□□ 0.53
HDGFL3-204ENST00000563790 C19orf44Q9H6X5 657 aa18.39■□□□□ 0.53
HDGFL3-204ENST00000563790 CEP152O94986 1710 aa18.38■□□□□ 0.53
HDGFL3-204ENST00000563790 C14orf37Q86TY3 774 aa18.35■□□□□ 0.53
HDGFL3-204ENST00000563790 GIGYF1O75420 1035 aaPredicted RBP18.34■□□□□ 0.53
HDGFL3-204ENST00000563790 EFCAB6Q5THR3 1501 aa18.33■□□□□ 0.53
HDGFL3-204ENST00000563790 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.33■□□□□ 0.52
HDGFL3-204ENST00000563790 COL22A1Q8NFW1 1626 aaPredicted RBP18.33■□□□□ 0.52
HDGFL3-204ENST00000563790 LAMC1P11047 1609 aa18.31■□□□□ 0.52
HDGFL3-204ENST00000563790 TNS1Q9HBL0 1735 aaKnown RBP18.31■□□□□ 0.52
HDGFL3-204ENST00000563790 DCCP43146 1447 aa18.31■□□□□ 0.52
HDGFL3-204ENST00000563790 PPP1R1BQ9UD71 204 aaPredicted RBP18.29■□□□□ 0.52
HDGFL3-204ENST00000563790 EN1Q05925 392 aaPredicted RBP18.28■□□□□ 0.52
HDGFL3-204ENST00000563790 MBD5Q9P267 1494 aa18.26■□□□□ 0.51
HDGFL3-204ENST00000563790 DISP2A7MBM2 1401 aa18.26■□□□□ 0.51
HDGFL3-204ENST00000563790 MST1RQ04912 1400 aa18.25■□□□□ 0.51
HDGFL3-204ENST00000563790 GOLGB1Q14789 3259 aaKnown RBP18.25■□□□□ 0.51
HDGFL3-204ENST00000563790 CAPN15O75808 1086 aa18.24■□□□□ 0.51
HDGFL3-204ENST00000563790 DDX17Q92841 729 aaKnown RBP18.24■□□□□ 0.51
HDGFL3-204ENST00000563790 MSH5O43196 834 aa18.23■□□□□ 0.51
HDGFL3-204ENST00000563790 PRELPP51888 382 aa18.22■□□□□ 0.51
HDGFL3-204ENST00000563790 CFDP1Q9UEE9 299 aaPredicted RBP18.22■□□□□ 0.51
HDGFL3-204ENST00000563790 CCDC18Q5T9S5 1454 aa18.21■□□□□ 0.51
HDGFL3-204ENST00000563790 SEPT12Q8IYM1 358 aa18.21■□□□□ 0.51
HDGFL3-204ENST00000563790 SPON1Q9HCB6 807 aa18.21■□□□□ 0.51
HDGFL3-204ENST00000563790 RREB1Q92766 1687 aa18.21■□□□□ 0.51
HDGFL3-204ENST00000563790 KRT27Q7Z3Y8 459 aa18.2■□□□□ 0.5
HDGFL3-204ENST00000563790 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
HDGFL3-204ENST00000563790 PCNTO95613 3336 aa18.2■□□□□ 0.5
HDGFL3-204ENST00000563790 MYO5BQ9ULV0 1848 aa18.19■□□□□ 0.5
HDGFL3-204ENST00000563790 NUP188Q5SRE5 1749 aa18.19■□□□□ 0.5
HDGFL3-204ENST00000563790 EIF2AK4Q9P2K8 1649 aaKnown RBP18.19■□□□□ 0.5
HDGFL3-204ENST00000563790 MYOM2P54296 1465 aa18.19■□□□□ 0.5
HDGFL3-204ENST00000563790 ARHGAP31Q2M1Z3 1444 aa18.17■□□□□ 0.5
HDGFL3-204ENST00000563790 ADGRB3O60242 1522 aa18.17■□□□□ 0.5
HDGFL3-204ENST00000563790 PPP1R15AO75807 674 aaPredicted RBP18.16■□□□□ 0.5
HDGFL3-204ENST00000563790 BCANQ96GW7 911 aa18.16■□□□□ 0.5
HDGFL3-204ENST00000563790 KCNQ2O43526 872 aa18.15■□□□□ 0.5
HDGFL3-204ENST00000563790 PLEKHG1Q9ULL1 1385 aa18.15■□□□□ 0.5
HDGFL3-204ENST00000563790 CSRNP3Q8WYN3 585 aa18.14■□□□□ 0.49
HDGFL3-204ENST00000563790 SHANK3Q9BYB0 1731 aa18.14■□□□□ 0.49
HDGFL3-204ENST00000563790 SLIT2O94813 1529 aa18.13■□□□□ 0.49
HDGFL3-204ENST00000563790 ONECUT3O60422 494 aaPredicted RBP18.13■□□□□ 0.49
HDGFL3-204ENST00000563790 EZH2Q15910 746 aaKnown RBP18.13■□□□□ 0.49
HDGFL3-204ENST00000563790 UNC5CLQ8IV45 518 aa18.13■□□□□ 0.49
HDGFL3-204ENST00000563790 ADGRB2O60241 1585 aa18.13■□□□□ 0.49
HDGFL3-204ENST00000563790 SOS2Q07890 1332 aaPredicted RBP18.12■□□□□ 0.49
HDGFL3-204ENST00000563790 TBX22Q9Y458 520 aa18.11■□□□□ 0.49
HDGFL3-204ENST00000563790 NRKQ7Z2Y5 1582 aa18.11■□□□□ 0.49
HDGFL3-204ENST00000563790 TRPM2O94759 1503 aa18.1■□□□□ 0.49
HDGFL3-204ENST00000563790 ZNF644Q9H582 1327 aaPredicted RBP18.1■□□□□ 0.49
HDGFL3-204ENST00000563790 HSPA6P17066 643 aa18.1■□□□□ 0.49
HDGFL3-204ENST00000563790 MYOM1P52179 1685 aa18.09■□□□□ 0.49
HDGFL3-204ENST00000563790 CCDC141Q6ZP82 1450 aa18.09■□□□□ 0.49
HDGFL3-204ENST00000563790 PIK3R4Q99570 1358 aa18.09■□□□□ 0.49
HDGFL3-204ENST00000563790 PARD3Q8TEW0 1356 aa18.08■□□□□ 0.49
HDGFL3-204ENST00000563790 COL13A1Q5TAT6 717 aaPredicted RBP18.08■□□□□ 0.48
HDGFL3-204ENST00000563790 CAMKK2Q96RR4 588 aa18.08■□□□□ 0.48
HDGFL3-204ENST00000563790 NALCNQ8IZF0 1738 aa18.08■□□□□ 0.48
HDGFL3-204ENST00000563790 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
HDGFL3-204ENST00000563790 NWD2Q9ULI1 1742 aa18.07■□□□□ 0.48
HDGFL3-204ENST00000563790 IDI1Q13907 227 aa18.07■□□□□ 0.48
HDGFL3-204ENST00000563790 EHBP1L1Q8N3D4 1523 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms