RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 UPF1Q92900 1129 aaKnown RBP eCLIP8.12□□□□□ -1.11
HERPUD1-207ENST00000563781 MTUS2Q5JR59 1369 aa8.11□□□□□ -1.11
HERPUD1-207ENST00000563781 MAP3K9P80192 1104 aa8.11□□□□□ -1.11
HERPUD1-207ENST00000563781 CDK11AQ9UQ88 783 aaPredicted RBP8.11□□□□□ -1.11
HERPUD1-207ENST00000563781 PCDHGA4Q9Y5G9 962 aa8.11□□□□□ -1.11
HERPUD1-207ENST00000563781 EHBP1L1Q8N3D4 1523 aa8.11□□□□□ -1.11
HERPUD1-207ENST00000563781 DIP2BQ9P265 1576 aa8.1□□□□□ -1.11
HERPUD1-207ENST00000563781 TBC1D12O60347 775 aa8.1□□□□□ -1.11
HERPUD1-207ENST00000563781 ZSWIM6Q9HCJ5 1215 aa8.1□□□□□ -1.11
HERPUD1-207ENST00000563781 KIF14Q15058 1648 aa8.1□□□□□ -1.11
HERPUD1-207ENST00000563781 GLI2P10070 1586 aa8.1□□□□□ -1.11
HERPUD1-207ENST00000563781 GPR153Q6NV75 609 aa8.09□□□□□ -1.11
HERPUD1-207ENST00000563781 KCNH8Q96L42 1107 aa8.09□□□□□ -1.11
HERPUD1-207ENST00000563781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.08□□□□□ -1.12
HERPUD1-207ENST00000563781 RIMBP2O15034 1052 aa8.08□□□□□ -1.12
HERPUD1-207ENST00000563781 FAM69CQ0P6D2 419 aa8.08□□□□□ -1.12
HERPUD1-207ENST00000563781 PDIA6Q15084 440 aa8.08□□□□□ -1.12
HERPUD1-207ENST00000563781 ZNF710Q8N1W2 664 aa8.08□□□□□ -1.12
HERPUD1-207ENST00000563781 TTC37Q6PGP7 1564 aa8.08□□□□□ -1.12
HERPUD1-207ENST00000563781 NCOA2Q15596 1464 aa8.07□□□□□ -1.12
HERPUD1-207ENST00000563781 KDM4FA0A1W2PPD8 638 aa8.07□□□□□ -1.12
HERPUD1-207ENST00000563781 SPDYE16A6NNV3 312 aaPredicted RBP8.07□□□□□ -1.12
HERPUD1-207ENST00000563781 ARSIQ5FYB1 569 aa8.07□□□□□ -1.12
HERPUD1-207ENST00000563781 ABCA9Q8IUA7 1624 aa8.07□□□□□ -1.12
HERPUD1-207ENST00000563781 EVI5O60447 810 aa8.06□□□□□ -1.12
HERPUD1-207ENST00000563781 TMEM132AQ24JP5 1023 aa8.06□□□□□ -1.12
HERPUD1-207ENST00000563781 PPARGC1BQ86YN6 1023 aaKnown RBP8.06□□□□□ -1.12
HERPUD1-207ENST00000563781 CD109Q6YHK3 1445 aa8.05□□□□□ -1.12
HERPUD1-207ENST00000563781 GPATCH8Q9UKJ3 1502 aaKnown RBP8.05□□□□□ -1.12
HERPUD1-207ENST00000563781 KHSRPQ92945 711 aaKnown RBP eCLIP8.05□□□□□ -1.122e-11■■□□□ 11.7
HERPUD1-207ENST00000563781 ANO8Q9HCE9 1232 aaPredicted RBP8.05□□□□□ -1.12
HERPUD1-207ENST00000563781 PHLDB1Q86UU1 1377 aa8.05□□□□□ -1.12
HERPUD1-207ENST00000563781 PLCH2O75038 1416 aa8.04□□□□□ -1.12
HERPUD1-207ENST00000563781 MAP3K4Q9Y6R4 1608 aa8.04□□□□□ -1.12
HERPUD1-207ENST00000563781 SUPT6HQ7KZ85 1726 aaKnown RBP8.04□□□□□ -1.12
HERPUD1-207ENST00000563781 KIF13AQ9H1H9 1805 aa8.04□□□□□ -1.12
HERPUD1-207ENST00000563781 SEMA3EO15041 775 aa8.04□□□□□ -1.12
HERPUD1-207ENST00000563781 HOXB1P14653 301 aaPredicted RBP8.04□□□□□ -1.12
HERPUD1-207ENST00000563781 CCNB3Q8WWL7 1395 aa8.03□□□□□ -1.12
HERPUD1-207ENST00000563781 HOMEZQ8IX15 550 aa8.03□□□□□ -1.12
HERPUD1-207ENST00000563781 ARAP3Q8WWN8 1544 aa8.03□□□□□ -1.12
HERPUD1-207ENST00000563781 MYOM3Q5VTT5 1437 aa8.03□□□□□ -1.12
HERPUD1-207ENST00000563781 PPRC1Q5VV67 1664 aaKnown RBP8.02□□□□□ -1.13
HERPUD1-207ENST00000563781 TESPA1A2RU30 521 aaPredicted RBP8.02□□□□□ -1.13
HERPUD1-207ENST00000563781 ST18O60284 1047 aa8.02□□□□□ -1.13
HERPUD1-207ENST00000563781 NUDT7P0C024 238 aa8.02□□□□□ -1.13
HERPUD1-207ENST00000563781 PTGER2P43116 358 aa8.02□□□□□ -1.13
HERPUD1-207ENST00000563781 FAM163AQ96GL9 167 aaPredicted RBP8.02□□□□□ -1.13
HERPUD1-207ENST00000563781 PREX2Q70Z35 1606 aa8.01□□□□□ -1.13
HERPUD1-207ENST00000563781 ARHGAP5Q13017 1502 aa8□□□□□ -1.13
HERPUD1-207ENST00000563781 MLLT3P42568 568 aaPredicted RBP8□□□□□ -1.13
HERPUD1-207ENST00000563781 EFCAB2Q5VUJ9 269 aa8□□□□□ -1.13
HERPUD1-207ENST00000563781 FGD6Q6ZV73 1430 aa8□□□□□ -1.13
HERPUD1-207ENST00000563781 MIA2Q96PC5 1412 aa8□□□□□ -1.13
HERPUD1-207ENST00000563781 CDC42BPAQ5VT25 1732 aa8□□□□□ -1.13
HERPUD1-207ENST00000563781 FANCAO15360 1455 aa8□□□□□ -1.13
HERPUD1-207ENST00000563781 NEO1Q92859 1461 aa8□□□□□ -1.13
HERPUD1-207ENST00000563781 ZNF316A6NFI3 1004 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-207ENST00000563781 AKNAQ7Z591 1439 aa7.99□□□□□ -1.13
HERPUD1-207ENST00000563781 MYO5CQ9NQX4 1742 aa7.99□□□□□ -1.13
HERPUD1-207ENST00000563781 CFDP1Q9UEE9 299 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-207ENST00000563781 TCOF1Q13428 1488 aaKnown RBP7.99□□□□□ -1.13
HERPUD1-207ENST00000563781 TEX14Q8IWB6 1497 aa7.99□□□□□ -1.13
HERPUD1-207ENST00000563781 ZNF644Q9H582 1327 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-207ENST00000563781 ARHGEF12Q9NZN5 1544 aa7.98□□□□□ -1.13
HERPUD1-207ENST00000563781 CDC42BPBQ9Y5S2 1711 aa7.98□□□□□ -1.13
HERPUD1-207ENST00000563781 SAMD9LQ8IVG5 1584 aa7.98□□□□□ -1.13
HERPUD1-207ENST00000563781 RRBP1Q9P2E9 1410 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-207ENST00000563781 LCE2DQ5TA82 110 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-207ENST00000563781 COL17A1Q9UMD9 1497 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-207ENST00000563781 ITSN2Q9NZM3 1697 aa7.98□□□□□ -1.13
HERPUD1-207ENST00000563781 ABCC1P33527 1531 aa7.98□□□□□ -1.13
HERPUD1-207ENST00000563781 DDX12PQ92771 950 aa7.97□□□□□ -1.13
HERPUD1-207ENST00000563781 LHX6Q9UPM6 363 aa7.97□□□□□ -1.13
HERPUD1-207ENST00000563781 CAMSAP2Q08AD1 1489 aa7.97□□□□□ -1.13
HERPUD1-207ENST00000563781 KIAA1107Q9UPP5 1409 aa7.96□□□□□ -1.13
HERPUD1-207ENST00000563781 ADGRL1O94910 1474 aa7.96□□□□□ -1.13
HERPUD1-207ENST00000563781 MBD5Q9P267 1494 aa7.96□□□□□ -1.13
HERPUD1-207ENST00000563781 GRXCR2A6NFK2 248 aa7.96□□□□□ -1.14
HERPUD1-207ENST00000563781 ZNF777Q9ULD5 760 aaPredicted RBP7.96□□□□□ -1.14
HERPUD1-207ENST00000563781 CFAP74Q9C0B2 1584 aa7.96□□□□□ -1.14
HERPUD1-207ENST00000563781 PTPN23Q9H3S7 1636 aa7.96□□□□□ -1.14
HERPUD1-207ENST00000563781 SCAPERQ9BY12 1400 aa7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 TRAPPC8Q9Y2L5 1435 aa7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 PLEKHH2Q8IVE3 1493 aa7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 SYCP2Q9BX26 1530 aa7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 PHF14O94880 888 aa7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 FOSBP53539 338 aa7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 SMYD5Q6GMV2 418 aa7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 PCDHGA10Q9Y5H3 936 aa7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 TSPOAP1O95153 1857 aa7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 POGZQ7Z3K3 1410 aa7.95□□□□□ -1.14
HERPUD1-207ENST00000563781 DENND4BO75064 1496 aaPredicted RBP7.94□□□□□ -1.14
HERPUD1-207ENST00000563781 FRMPD1Q5SYB0 1578 aa7.94□□□□□ -1.14
HERPUD1-207ENST00000563781 OSBPP22059 807 aa7.94□□□□□ -1.14
HERPUD1-207ENST00000563781 HNRNPMP52272 730 aaKnown RBP eCLIP7.94□□□□□ -1.14
HERPUD1-207ENST00000563781 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.94□□□□□ -1.14
HERPUD1-207ENST00000563781 MARVELD3Q96A59 401 aa7.94□□□□□ -1.14
HERPUD1-207ENST00000563781 ABCC5O15440 1437 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms