RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 ANKRD50Q9ULJ7 1429 aa8.62□□□□□ -1.03
LINC01963-201ENST00000562038 TSPY4P0CV99 314 aa8.62□□□□□ -1.03
LINC01963-201ENST00000562038 TSPY10P0CW01 314 aa8.62□□□□□ -1.03
LINC01963-201ENST00000562038 RANGAP1P46060 587 aaPredicted RBP8.62□□□□□ -1.03
LINC01963-201ENST00000562038 NOS1P29475 1434 aa8.62□□□□□ -1.03
LINC01963-201ENST00000562038 ATP1B4Q9UN42 357 aaPredicted RBP8.61□□□□□ -1.03
LINC01963-201ENST00000562038 IFT172Q9UG01 1749 aa8.61□□□□□ -1.03
LINC01963-201ENST00000562038 ERVK-7P63135 1459 aa8.61□□□□□ -1.03
LINC01963-201ENST00000562038 MYT1Q01538 1121 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 RGS12O14924 1447 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 ZMYM3Q14202 1370 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 RGPD3A6NKT7 1758 aaPredicted RBP8.6□□□□□ -1.03
LINC01963-201ENST00000562038 RGPD4Q7Z3J3 1758 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 ADGRB3O60242 1522 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 ATAD2Q6PL18 1390 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 KANK1Q14678 1352 aa8.6□□□□□ -1.03
LINC01963-201ENST00000562038 RGPD1P0DJD0 1748 aa8.59□□□□□ -1.03
LINC01963-201ENST00000562038 CHD2O14647 1828 aaKnown RBP8.59□□□□□ -1.03
LINC01963-201ENST00000562038 KCNA4P22459 653 aa8.59□□□□□ -1.03
LINC01963-201ENST00000562038 PRAG1Q86YV5 1406 aa8.59□□□□□ -1.03
LINC01963-201ENST00000562038 RREB1Q92766 1687 aa8.58□□□□□ -1.04
LINC01963-201ENST00000562038 HNRNPMP52272 730 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC01963-201ENST00000562038 AFAP1Q8N556 730 aa8.58□□□□□ -1.04
LINC01963-201ENST00000562038 ZNF644Q9H582 1327 aaPredicted RBP8.57□□□□□ -1.04
LINC01963-201ENST00000562038 ARID3CA6NKF2 412 aa8.57□□□□□ -1.04
LINC01963-201ENST00000562038 KIF1BO60333 1816 aa8.57□□□□□ -1.04
LINC01963-201ENST00000562038 ERICH6Q7L0X2 663 aa8.56□□□□□ -1.04
LINC01963-201ENST00000562038 NCKAP5LQ9HCH0 1330 aa8.56□□□□□ -1.04
LINC01963-201ENST00000562038 TMEM131LA2VDJ0 1609 aa8.56□□□□□ -1.04
LINC01963-201ENST00000562038 PELP1Q8IZL8 1130 aaKnown RBP8.56□□□□□ -1.04
LINC01963-201ENST00000562038 SETD5Q9C0A6 1442 aa8.55□□□□□ -1.04
LINC01963-201ENST00000562038 KIAA1210Q9ULL0 1709 aa8.55□□□□□ -1.04
LINC01963-201ENST00000562038 RALGAPBQ86X10 1494 aa8.54□□□□□ -1.04
LINC01963-201ENST00000562038 DISP2A7MBM2 1401 aa8.54□□□□□ -1.04
LINC01963-201ENST00000562038 NEXMIFQ5QGS0 1516 aa8.54□□□□□ -1.04
LINC01963-201ENST00000562038 ZFYVE9O95405 1425 aa8.53□□□□□ -1.04
LINC01963-201ENST00000562038 CHD4Q14839 1912 aa8.53□□□□□ -1.04
LINC01963-201ENST00000562038 PPLO60437 1756 aa8.53□□□□□ -1.04
LINC01963-201ENST00000562038 SCAF11Q99590 1463 aaKnown RBP8.53□□□□□ -1.04
LINC01963-201ENST00000562038 COL24A1Q17RW2 1714 aa8.52□□□□□ -1.05
LINC01963-201ENST00000562038 KNDC1Q76NI1 1749 aa8.52□□□□□ -1.05
LINC01963-201ENST00000562038 ZRANB1Q9UGI0 708 aa8.51□□□□□ -1.05
LINC01963-201ENST00000562038 DCCP43146 1447 aa8.51□□□□□ -1.05
LINC01963-201ENST00000562038 CLTCL1P53675 1640 aa8.51□□□□□ -1.05
LINC01963-201ENST00000562038 TNS1Q9HBL0 1735 aaKnown RBP8.5□□□□□ -1.05
LINC01963-201ENST00000562038 MYOM2P54296 1465 aa8.5□□□□□ -1.05
LINC01963-201ENST00000562038 ZNF777Q9ULD5 760 aaPredicted RBP8.5□□□□□ -1.05
LINC01963-201ENST00000562038 NRXN1Q9ULB1 1477 aa8.5□□□□□ -1.05
LINC01963-201ENST00000562038 TNRQ92752 1358 aa8.49□□□□□ -1.05
LINC01963-201ENST00000562038 KLHL34Q8N239 644 aa8.49□□□□□ -1.05
LINC01963-201ENST00000562038 STAC3Q96MF2 364 aa8.49□□□□□ -1.05
LINC01963-201ENST00000562038 ATRNO75882 1429 aa8.49□□□□□ -1.05
LINC01963-201ENST00000562038 CEBPAP49715 358 aaPredicted RBP8.48□□□□□ -1.05
LINC01963-201ENST00000562038 PTCH1Q13635 1447 aa8.47□□□□□ -1.05
LINC01963-201ENST00000562038 CLSPNQ9HAW4 1339 aa8.47□□□□□ -1.05
LINC01963-201ENST00000562038 NWD2Q9ULI1 1742 aa8.47□□□□□ -1.05
LINC01963-201ENST00000562038 SLC52A1Q9NWF4 448 aa8.47□□□□□ -1.05
LINC01963-201ENST00000562038 BLMP54132 1417 aaPredicted RBP8.47□□□□□ -1.05
LINC01963-201ENST00000562038 BRWD3Q6RI45 1802 aa8.46□□□□□ -1.05
LINC01963-201ENST00000562038 MYO5BQ9ULV0 1848 aa8.46□□□□□ -1.06
LINC01963-201ENST00000562038 XRN1Q8IZH2 1706 aaKnown RBP8.45□□□□□ -1.06
LINC01963-201ENST00000562038 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.45□□□□□ -1.06
LINC01963-201ENST00000562038 PIK3R4Q99570 1358 aa8.45□□□□□ -1.06
LINC01963-201ENST00000562038 NRXN3Q9Y4C0 1643 aa8.45□□□□□ -1.06
LINC01963-201ENST00000562038 RPGRIP1LQ68CZ1 1315 aa8.44□□□□□ -1.06
LINC01963-201ENST00000562038 FAM50AQ14320 339 aaKnown RBP8.44□□□□□ -1.06
LINC01963-201ENST00000562038 CASZ1Q86V15 1759 aa8.44□□□□□ -1.06
LINC01963-201ENST00000562038 KIF3BO15066 747 aa8.44□□□□□ -1.06
LINC01963-201ENST00000562038 RXRBP28702 533 aa8.44□□□□□ -1.06
LINC01963-201ENST00000562038 SPATA31E1Q6ZUB1 1445 aa8.44□□□□□ -1.06
LINC01963-201ENST00000562038 NINLQ9Y2I6 1382 aa8.43□□□□□ -1.06
LINC01963-201ENST00000562038 PLEKHG5O94827 1062 aa8.43□□□□□ -1.06
LINC01963-201ENST00000562038 RAB3GAP2Q9H2M9 1393 aa8.43□□□□□ -1.06
LINC01963-201ENST00000562038 TULP1O00294 542 aaPredicted RBP8.42□□□□□ -1.06
LINC01963-201ENST00000562038 WASHC2CQ9Y4E1 1318 aa8.42□□□□□ -1.06
LINC01963-201ENST00000562038 ANKLE2Q86XL3 938 aa8.42□□□□□ -1.06
LINC01963-201ENST00000562038 RBM33Q96EV2 1170 aaKnown RBP8.42□□□□□ -1.06
LINC01963-201ENST00000562038 NUP188Q5SRE5 1749 aa8.42□□□□□ -1.06
LINC01963-201ENST00000562038 ADGRB2O60241 1585 aa8.42□□□□□ -1.06
LINC01963-201ENST00000562038 DLC1Q96QB1 1528 aa8.42□□□□□ -1.06
LINC01963-201ENST00000562038 NUP155O75694 1391 aa8.41□□□□□ -1.06
LINC01963-201ENST00000562038 PLEKHG1Q9ULL1 1385 aa8.41□□□□□ -1.06
LINC01963-201ENST00000562038 USP32Q8NFA0 1604 aa8.41□□□□□ -1.06
LINC01963-201ENST00000562038 PIP4K2BP78356 416 aa8.41□□□□□ -1.06
LINC01963-201ENST00000562038 TRIM26Q12899 539 aaPredicted RBP8.4□□□□□ -1.06
LINC01963-201ENST00000562038 AMER1Q5JTC6 1135 aaPredicted RBP8.4□□□□□ -1.06
LINC01963-201ENST00000562038 RRP7BPQ9NSQ0 103 aa8.4□□□□□ -1.06
LINC01963-201ENST00000562038 RBM6P78332 1123 aaKnown RBP8.4□□□□□ -1.06
LINC01963-201ENST00000562038 ESF1Q9H501 851 aaKnown RBP8.4□□□□□ -1.06
LINC01963-201ENST00000562038 ANKRD30BQ9BXX2 1392 aa8.4□□□□□ -1.06
LINC01963-201ENST00000562038 TMEM2Q9UHN6 1383 aa8.39□□□□□ -1.07
LINC01963-201ENST00000562038 THEMISQ8N1K5 641 aaPredicted RBP8.38□□□□□ -1.07
LINC01963-201ENST00000562038 TECPR2O15040 1411 aa8.38□□□□□ -1.07
LINC01963-201ENST00000562038 ARXQ96QS3 562 aa8.38□□□□□ -1.07
LINC01963-201ENST00000562038 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC01963-201ENST00000562038 ASXL1Q8IXJ9 1541 aa8.37□□□□□ -1.07
LINC01963-201ENST00000562038 CCDC144AA2RUR9 1427 aa8.36□□□□□ -1.07
LINC01963-201ENST00000562038 QSER1Q2KHR3 1735 aa8.36□□□□□ -1.07
LINC01963-201ENST00000562038 PARD3Q8TEW0 1356 aa8.36□□□□□ -1.07
LINC01963-201ENST00000562038 HDGFP51858 240 aaKnown RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 1986.9 ms