RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 RGL3Q3MIN7 710 aa18.26■□□□□ 0.51
CMTM4-203ENST00000561680 ARHGAP23Q9P227 1491 aa18.26■□□□□ 0.51
CMTM4-203ENST00000561680 ZFYVE9O95405 1425 aa18.25■□□□□ 0.51
CMTM4-203ENST00000561680 NRXN1Q9ULB1 1477 aa18.25■□□□□ 0.51
CMTM4-203ENST00000561680 LAMC1P11047 1609 aa18.24■□□□□ 0.51
CMTM4-203ENST00000561680 RPGRIP1LQ68CZ1 1315 aa18.23■□□□□ 0.51
CMTM4-203ENST00000561680 IQGAP1P46940 1657 aa18.23■□□□□ 0.51
CMTM4-203ENST00000561680 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
CMTM4-203ENST00000561680 SETD1AO15047 1707 aaKnown RBP18.23■□□□□ 0.51
CMTM4-203ENST00000561680 RIMS2Q9UQ26 1411 aa18.23■□□□□ 0.51
CMTM4-203ENST00000561680 ZNF326Q5BKZ1 582 aaKnown RBP18.22■□□□□ 0.51
CMTM4-203ENST00000561680 PRAG1Q86YV5 1406 aa18.22■□□□□ 0.51
CMTM4-203ENST00000561680 TMEM2Q9UHN6 1383 aa18.21■□□□□ 0.51
CMTM4-203ENST00000561680 NRXN3Q9Y4C0 1643 aa18.21■□□□□ 0.51
CMTM4-203ENST00000561680 DCAF11Q8TEB1 546 aa18.21■□□□□ 0.51
CMTM4-203ENST00000561680 PPP1R15AO75807 674 aaPredicted RBP18.2■□□□□ 0.5
CMTM4-203ENST00000561680 STAC3Q96MF2 364 aa18.2■□□□□ 0.5
CMTM4-203ENST00000561680 LMTK3Q96Q04 1460 aa18.2■□□□□ 0.5
CMTM4-203ENST00000561680 PIK3C2GO75747 1445 aa18.18■□□□□ 0.5
CMTM4-203ENST00000561680 SETBP1Q9Y6X0 1596 aa18.17■□□□□ 0.5
CMTM4-203ENST00000561680 THEMISQ8N1K5 641 aaPredicted RBP18.17■□□□□ 0.5
CMTM4-203ENST00000561680 RALGAPBQ86X10 1494 aa18.17■□□□□ 0.5
CMTM4-203ENST00000561680 KDM2AQ9Y2K7 1162 aa18.16■□□□□ 0.5
CMTM4-203ENST00000561680 SCAF11Q99590 1463 aaKnown RBP18.15■□□□□ 0.5
CMTM4-203ENST00000561680 STRCQ7RTU9 1775 aa18.14■□□□□ 0.5
CMTM4-203ENST00000561680 NBPF8Q3BBV2 869 aa18.14■□□□□ 0.49
CMTM4-203ENST00000561680 ADGRF5Q8IZF2 1346 aa18.14■□□□□ 0.49
CMTM4-203ENST00000561680 VGFO15240 615 aaPredicted RBP18.13■□□□□ 0.49
CMTM4-203ENST00000561680 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.13■□□□□ 0.49
CMTM4-203ENST00000561680 ALKQ9UM73 1620 aa18.12■□□□□ 0.49
CMTM4-203ENST00000561680 DIP2AQ14689 1571 aa18.12■□□□□ 0.49
CMTM4-203ENST00000561680 ASXL1Q8IXJ9 1541 aa18.1■□□□□ 0.49
CMTM4-203ENST00000561680 PLEKHG1Q9ULL1 1385 aa18.1■□□□□ 0.49
CMTM4-203ENST00000561680 HDGFP51858 240 aaKnown RBP18.1■□□□□ 0.49
CMTM4-203ENST00000561680 NUTM2DQ5VT03 806 aaPredicted RBP18.1■□□□□ 0.49
CMTM4-203ENST00000561680 ADGRB1O14514 1584 aa18.09■□□□□ 0.49
CMTM4-203ENST00000561680 LTKP29376 864 aa18.09■□□□□ 0.49
CMTM4-203ENST00000561680 KNDC1Q76NI1 1749 aa18.09■□□□□ 0.49
CMTM4-203ENST00000561680 MED14O60244 1454 aa18.08■□□□□ 0.49
CMTM4-203ENST00000561680 EID1Q9Y6B2 187 aa18.08■□□□□ 0.48
CMTM4-203ENST00000561680 GPRASP1Q5JY77 1395 aa18.07■□□□□ 0.48
CMTM4-203ENST00000561680 ARHGEF28Q8N1W1 1705 aaKnown RBP18.07■□□□□ 0.48
CMTM4-203ENST00000561680 TXNDC2Q86VQ3 553 aa18.07■□□□□ 0.48
CMTM4-203ENST00000561680 CHD2O14647 1828 aaKnown RBP18.06■□□□□ 0.48
CMTM4-203ENST00000561680 ADAMTS13Q76LX8 1427 aa18.06■□□□□ 0.48
CMTM4-203ENST00000561680 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
CMTM4-203ENST00000561680 ANKLE2Q86XL3 938 aa18.04■□□□□ 0.48
CMTM4-203ENST00000561680 C14orf93Q9H972 538 aaKnown RBP18.03■□□□□ 0.48
CMTM4-203ENST00000561680 NPHP4O75161 1426 aaPredicted RBP18.03■□□□□ 0.48
CMTM4-203ENST00000561680 CFAP70Q5T0N1 1121 aa18.02■□□□□ 0.48
CMTM4-203ENST00000561680 XRN1Q8IZH2 1706 aaKnown RBP18.02■□□□□ 0.48
CMTM4-203ENST00000561680 HSPA2P54652 639 aa18.01■□□□□ 0.47
CMTM4-203ENST00000561680 NBPF1Q3BBV0 1214 aa18■□□□□ 0.47
CMTM4-203ENST00000561680 QRICH2Q9H0J4 1663 aa17.99■□□□□ 0.47
CMTM4-203ENST00000561680 CPS1P31327 1500 aa17.98■□□□□ 0.47
CMTM4-203ENST00000561680 NCKAP5LQ9HCH0 1330 aa17.98■□□□□ 0.47
CMTM4-203ENST00000561680 NWD1Q149M9 1564 aa17.97■□□□□ 0.47
CMTM4-203ENST00000561680 SENP3Q9H4L4 574 aaPredicted RBP17.97■□□□□ 0.47
CMTM4-203ENST00000561680 DLC1Q96QB1 1528 aa17.97■□□□□ 0.47
CMTM4-203ENST00000561680 STRCP1A6NGW2 1772 aa17.96■□□□□ 0.47
CMTM4-203ENST00000561680 METP08581 1390 aa17.96■□□□□ 0.47
CMTM4-203ENST00000561680 CARD11Q9BXL7 1154 aa17.96■□□□□ 0.47
CMTM4-203ENST00000561680 YTHDC2Q9H6S0 1430 aaKnown RBP17.96■□□□□ 0.47
CMTM4-203ENST00000561680 USP47Q96K76 1375 aa17.95■□□□□ 0.46
CMTM4-203ENST00000561680 BCANQ96GW7 911 aa17.95■□□□□ 0.46
CMTM4-203ENST00000561680 TBX22Q9Y458 520 aa17.94■□□□□ 0.46
CMTM4-203ENST00000561680 TECPR2O15040 1411 aa17.94■□□□□ 0.46
CMTM4-203ENST00000561680 PIK3R4Q99570 1358 aa17.93■□□□□ 0.46
CMTM4-203ENST00000561680 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
CMTM4-203ENST00000561680 LRPPRCP42704 1394 aaKnown RBP17.92■□□□□ 0.46
CMTM4-203ENST00000561680 PTPRUQ92729 1446 aa17.92■□□□□ 0.46
CMTM4-203ENST00000561680 TMEM132EQ6IEE7 984 aa17.92■□□□□ 0.46
CMTM4-203ENST00000561680 EIF3AQ14152 1382 aaKnown RBP17.91■□□□□ 0.46
CMTM4-203ENST00000561680 EIF4G2P78344 907 aaKnown RBP eCLIP17.89■□□□□ 0.45
CMTM4-203ENST00000561680 ABCC11Q96J66 1382 aa17.89■□□□□ 0.45
CMTM4-203ENST00000561680 PTCH1Q13635 1447 aa17.89■□□□□ 0.45
CMTM4-203ENST00000561680 XIRP1Q702N8 1843 aaKnown RBP17.88■□□□□ 0.45
CMTM4-203ENST00000561680 HSPA5P11021 654 aaKnown RBP17.87■□□□□ 0.45
CMTM4-203ENST00000561680 FAM135BQ49AJ0 1406 aa17.86■□□□□ 0.45
CMTM4-203ENST00000561680 NALCNQ8IZF0 1738 aa17.86■□□□□ 0.45
CMTM4-203ENST00000561680 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.86■□□□□ 0.45
CMTM4-203ENST00000561680 NKTRP30414 1462 aaKnown RBP17.85■□□□□ 0.45
CMTM4-203ENST00000561680 TRAK1Q9UPV9 953 aa17.85■□□□□ 0.45
CMTM4-203ENST00000561680 ADGRB2O60241 1585 aa17.84■□□□□ 0.45
CMTM4-203ENST00000561680 SBNO2Q9Y2G9 1366 aa17.84■□□□□ 0.45
CMTM4-203ENST00000561680 STK26Q9P289 416 aa17.84■□□□□ 0.45
CMTM4-203ENST00000561680 ROBO2Q9HCK4 1378 aa17.82■□□□□ 0.44
CMTM4-203ENST00000561680 CENPJQ9HC77 1338 aaPredicted RBP17.82■□□□□ 0.44
CMTM4-203ENST00000561680 ST20-MTHFSA0A0A6YYL1 179 aa17.82■□□□□ 0.44
CMTM4-203ENST00000561680 SIRT1Q96EB6 747 aa17.81■□□□□ 0.44
CMTM4-203ENST00000561680 AMOTL2Q9Y2J4 779 aa17.81■□□□□ 0.44
CMTM4-203ENST00000561680 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
CMTM4-203ENST00000561680 PLEKHH1Q9ULM0 1364 aa17.79■□□□□ 0.44
CMTM4-203ENST00000561680 TULP4Q9NRJ4 1543 aa17.79■□□□□ 0.44
CMTM4-203ENST00000561680 KCNA6P17658 529 aa17.79■□□□□ 0.44
CMTM4-203ENST00000561680 TESK2Q96S53 571 aa17.79■□□□□ 0.44
CMTM4-203ENST00000561680 HIRIP3Q9BW71 556 aaPredicted RBP17.79■□□□□ 0.44
CMTM4-203ENST00000561680 MYOM1P52179 1685 aa17.78■□□□□ 0.44
CMTM4-203ENST00000561680 PRAM1Q96QH2 718 aa17.78■□□□□ 0.44
CMTM4-203ENST00000561680 RGPD8O14715 1765 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms