RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 RIMS2Q9UQ26 1411 aa17.99■□□□□ 0.47
USP8-212ENST00000560730 NUTM2DQ5VT03 806 aaPredicted RBP17.98■□□□□ 0.47
USP8-212ENST00000560730 KIF1BO60333 1816 aa17.97■□□□□ 0.47
USP8-212ENST00000560730 STRCP1A6NGW2 1772 aa17.96■□□□□ 0.47
USP8-212ENST00000560730 ILDR1Q86SU0 546 aaPredicted RBP17.95■□□□□ 0.46
USP8-212ENST00000560730 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
USP8-212ENST00000560730 HRCP23327 699 aa17.93■□□□□ 0.46
USP8-212ENST00000560730 SLC26A8Q96RN1 970 aa17.93■□□□□ 0.46
USP8-212ENST00000560730 PPP1R15AO75807 674 aaPredicted RBP17.92■□□□□ 0.46
USP8-212ENST00000560730 HDGFP51858 240 aaKnown RBP17.91■□□□□ 0.46
USP8-212ENST00000560730 ZNF326Q5BKZ1 582 aaKnown RBP17.91■□□□□ 0.46
USP8-212ENST00000560730 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.91■□□□□ 0.46
USP8-212ENST00000560730 FBXO41Q8TF61 875 aa17.91■□□□□ 0.46
USP8-212ENST00000560730 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
USP8-212ENST00000560730 BCANQ96GW7 911 aa17.9■□□□□ 0.46
USP8-212ENST00000560730 NEXMIFQ5QGS0 1516 aa17.88■□□□□ 0.45
USP8-212ENST00000560730 CPS1P31327 1500 aa17.87■□□□□ 0.45
USP8-212ENST00000560730 CCDC144AA2RUR9 1427 aa17.87■□□□□ 0.45
USP8-212ENST00000560730 ADAMTS13Q76LX8 1427 aa17.85■□□□□ 0.45
USP8-212ENST00000560730 IQSEC2Q5JU85 1478 aa17.84■□□□□ 0.45
USP8-212ENST00000560730 LRRC7Q96NW7 1537 aa17.83■□□□□ 0.45
USP8-212ENST00000560730 TBX22Q9Y458 520 aa17.83■□□□□ 0.45
USP8-212ENST00000560730 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.45
USP8-212ENST00000560730 PPLO60437 1756 aa17.83■□□□□ 0.44
USP8-212ENST00000560730 SPATA31E1Q6ZUB1 1445 aa17.83■□□□□ 0.44
USP8-212ENST00000560730 CHD2O14647 1828 aaKnown RBP17.83■□□□□ 0.44
USP8-212ENST00000560730 KCNA6P17658 529 aa17.82■□□□□ 0.44
USP8-212ENST00000560730 RGL3Q3MIN7 710 aa17.82■□□□□ 0.44
USP8-212ENST00000560730 ANKRD30BQ9BXX2 1392 aa17.82■□□□□ 0.44
USP8-212ENST00000560730 XIRP1Q702N8 1843 aaKnown RBP17.82■□□□□ 0.44
USP8-212ENST00000560730 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
USP8-212ENST00000560730 RPGRIP1LQ68CZ1 1315 aa17.8■□□□□ 0.44
USP8-212ENST00000560730 SETBP1Q9Y6X0 1596 aa17.8■□□□□ 0.44
USP8-212ENST00000560730 DIP2AQ14689 1571 aa17.79■□□□□ 0.44
USP8-212ENST00000560730 NWD1Q149M9 1564 aa17.79■□□□□ 0.44
USP8-212ENST00000560730 VGFO15240 615 aaPredicted RBP17.78■□□□□ 0.44
USP8-212ENST00000560730 RBM33Q96EV2 1170 aaKnown RBP17.78■□□□□ 0.44
USP8-212ENST00000560730 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
USP8-212ENST00000560730 UBAP1LF5GYI3 381 aa17.77■□□□□ 0.44
USP8-212ENST00000560730 PTPRUQ92729 1446 aa17.76■□□□□ 0.43
USP8-212ENST00000560730 PROSER2Q86WR7 435 aaPredicted RBP17.76■□□□□ 0.43
USP8-212ENST00000560730 METP08581 1390 aa17.75■□□□□ 0.43
USP8-212ENST00000560730 ADGRF5Q8IZF2 1346 aa17.75■□□□□ 0.43
USP8-212ENST00000560730 TMEM94Q12767 1356 aa17.74■□□□□ 0.43
USP8-212ENST00000560730 PIK3R4Q99570 1358 aa17.74■□□□□ 0.43
USP8-212ENST00000560730 SETD1AO15047 1707 aaKnown RBP17.74■□□□□ 0.43
USP8-212ENST00000560730 NKTRP30414 1462 aaKnown RBP17.73■□□□□ 0.43
USP8-212ENST00000560730 ALKQ9UM73 1620 aa17.73■□□□□ 0.43
USP8-212ENST00000560730 AMOTL2Q9Y2J4 779 aa17.72■□□□□ 0.43
USP8-212ENST00000560730 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
USP8-212ENST00000560730 TOM1O60784 492 aa17.69■□□□□ 0.42
USP8-212ENST00000560730 PIP4K2BP78356 416 aa17.68■□□□□ 0.42
USP8-212ENST00000560730 SCAF1Q9H7N4 1312 aaKnown RBP17.66■□□□□ 0.42
USP8-212ENST00000560730 PIK3C2GO75747 1445 aa17.65■□□□□ 0.42
USP8-212ENST00000560730 DHX57Q6P158 1386 aaKnown RBP17.65■□□□□ 0.42
USP8-212ENST00000560730 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.42
USP8-212ENST00000560730 MYOM2P54296 1465 aa17.64■□□□□ 0.41
USP8-212ENST00000560730 NRXN1Q9ULB1 1477 aa17.64■□□□□ 0.41
USP8-212ENST00000560730 DCAF11Q8TEB1 546 aa17.64■□□□□ 0.41
USP8-212ENST00000560730 TMEM132EQ6IEE7 984 aa17.63■□□□□ 0.41
USP8-212ENST00000560730 MSH6P52701 1360 aa17.62■□□□□ 0.41
USP8-212ENST00000560730 NCOA3Q9Y6Q9 1424 aa17.62■□□□□ 0.41
USP8-212ENST00000560730 CFAP70Q5T0N1 1121 aa17.62■□□□□ 0.41
USP8-212ENST00000560730 SIN3AQ96ST3 1273 aa17.62■□□□□ 0.41
USP8-212ENST00000560730 ASXL1Q8IXJ9 1541 aa17.62■□□□□ 0.41
USP8-212ENST00000560730 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.61■□□□□ 0.41
USP8-212ENST00000560730 C14orf37Q86TY3 774 aa17.61■□□□□ 0.41
USP8-212ENST00000560730 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
USP8-212ENST00000560730 ROBO2Q9HCK4 1378 aa17.61■□□□□ 0.41
USP8-212ENST00000560730 C19orf44Q9H6X5 657 aa17.59■□□□□ 0.41
USP8-212ENST00000560730 STK26Q9P289 416 aa17.59■□□□□ 0.41
USP8-212ENST00000560730 HSPA1LP34931 641 aa17.57■□□□□ 0.4
USP8-212ENST00000560730 PTCH1Q13635 1447 aa17.57■□□□□ 0.4
USP8-212ENST00000560730 PRAG1Q86YV5 1406 aa17.56■□□□□ 0.4
USP8-212ENST00000560730 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
USP8-212ENST00000560730 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
USP8-212ENST00000560730 NALCNQ8IZF0 1738 aa17.56■□□□□ 0.4
USP8-212ENST00000560730 LAMC1P11047 1609 aa17.56■□□□□ 0.4
USP8-212ENST00000560730 LRPPRCP42704 1394 aaKnown RBP17.56■□□□□ 0.4
USP8-212ENST00000560730 SLAIN2Q9P270 581 aa17.55■□□□□ 0.4
USP8-212ENST00000560730 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
USP8-212ENST00000560730 STAC3Q96MF2 364 aa17.55■□□□□ 0.4
USP8-212ENST00000560730 ABCC11Q96J66 1382 aa17.54■□□□□ 0.4
USP8-212ENST00000560730 ROBO1Q9Y6N7 1651 aa17.54■□□□□ 0.4
USP8-212ENST00000560730 ATF3P18847 181 aa17.54■□□□□ 0.4
USP8-212ENST00000560730 WAPLQ7Z5K2 1190 aa17.54■□□□□ 0.4
USP8-212ENST00000560730 TECPR2O15040 1411 aa17.53■□□□□ 0.4
USP8-212ENST00000560730 FAM135BQ49AJ0 1406 aa17.53■□□□□ 0.4
USP8-212ENST00000560730 ADGRL3Q9HAR2 1447 aa17.53■□□□□ 0.4
USP8-212ENST00000560730 KNDC1Q76NI1 1749 aa17.53■□□□□ 0.4
USP8-212ENST00000560730 CADPS2Q86UW7 1296 aa17.53■□□□□ 0.4
USP8-212ENST00000560730 L3MBTL2Q969R5 705 aa17.52■□□□□ 0.4
USP8-212ENST00000560730 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
USP8-212ENST00000560730 ADGRB1O14514 1584 aa17.51■□□□□ 0.39
USP8-212ENST00000560730 DCCP43146 1447 aa17.5■□□□□ 0.39
USP8-212ENST00000560730 MST1RQ04912 1400 aa17.48■□□□□ 0.39
USP8-212ENST00000560730 SIRT1Q96EB6 747 aa17.47■□□□□ 0.39
USP8-212ENST00000560730 TRAK1Q9UPV9 953 aa17.47■□□□□ 0.39
USP8-212ENST00000560730 NBPF1Q3BBV0 1214 aa17.46■□□□□ 0.39
USP8-212ENST00000560730 KIAA1210Q9ULL0 1709 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms