RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 SBNO2Q9Y2G9 1366 aa8.73□□□□□ -1.01
AC087516.2-201ENST00000558963 TESK2Q96S53 571 aa8.72□□□□□ -1.01
AC087516.2-201ENST00000558963 NLRP13Q86W25 1043 aa8.72□□□□□ -1.01
AC087516.2-201ENST00000558963 TRAPPC8Q9Y2L5 1435 aa8.72□□□□□ -1.01
AC087516.2-201ENST00000558963 ADGRB3O60242 1522 aa8.72□□□□□ -1.01
AC087516.2-201ENST00000558963 ABCA6Q8N139 1617 aa8.72□□□□□ -1.01
AC087516.2-201ENST00000558963 EFCAB2Q5VUJ9 269 aa8.72□□□□□ -1.01
AC087516.2-201ENST00000558963 PIK3C2GO75747 1445 aa8.72□□□□□ -1.01
AC087516.2-201ENST00000558963 PPLO60437 1756 aa8.71□□□□□ -1.02
AC087516.2-201ENST00000558963 FBLN2P98095 1184 aa8.7□□□□□ -1.02
AC087516.2-201ENST00000558963 HECW2Q9P2P5 1572 aa8.7□□□□□ -1.02
AC087516.2-201ENST00000558963 NEO1Q92859 1461 aa8.7□□□□□ -1.02
AC087516.2-201ENST00000558963 ST20-MTHFSA0A0A6YYL1 179 aa8.7□□□□□ -1.02
AC087516.2-201ENST00000558963 PIK3C2BO00750 1634 aa8.7□□□□□ -1.02
AC087516.2-201ENST00000558963 REREQ9P2R6 1566 aa8.69□□□□□ -1.02
AC087516.2-201ENST00000558963 ASXL1Q8IXJ9 1541 aa8.69□□□□□ -1.02
AC087516.2-201ENST00000558963 MROH2AA6NES4 1674 aa8.69□□□□□ -1.02
AC087516.2-201ENST00000558963 DCAF11Q8TEB1 546 aa8.69□□□□□ -1.02
AC087516.2-201ENST00000558963 DISP3Q9P2K9 1392 aa8.68□□□□□ -1.02
AC087516.2-201ENST00000558963 ADGRL1O94910 1474 aa8.68□□□□□ -1.02
AC087516.2-201ENST00000558963 MLH3Q9UHC1 1453 aa8.68□□□□□ -1.02
AC087516.2-201ENST00000558963 ASXL2Q76L83 1435 aa8.68□□□□□ -1.02
AC087516.2-201ENST00000558963 EIF3AQ14152 1382 aaKnown RBP8.68□□□□□ -1.02
AC087516.2-201ENST00000558963 ZNF518AQ6AHZ1 1483 aa8.67□□□□□ -1.02
AC087516.2-201ENST00000558963 FAM9BQ8IZU0 186 aa8.67□□□□□ -1.02
AC087516.2-201ENST00000558963 ERICH6Q7L0X2 663 aa8.67□□□□□ -1.02
AC087516.2-201ENST00000558963 IQSEC2Q5JU85 1478 aa8.66□□□□□ -1.02
AC087516.2-201ENST00000558963 NPM1P06748 294 aaKnown RBP eCLIP8.66□□□□□ -1.02
AC087516.2-201ENST00000558963 IRX6P78412 446 aaPredicted RBP8.66□□□□□ -1.02
AC087516.2-201ENST00000558963 CDCA8Q53HL2 280 aa8.66□□□□□ -1.02
AC087516.2-201ENST00000558963 TMC1Q8TDI8 760 aa8.66□□□□□ -1.02
AC087516.2-201ENST00000558963 KANK1Q14678 1352 aa8.66□□□□□ -1.02
AC087516.2-201ENST00000558963 FRMPD1Q5SYB0 1578 aa8.66□□□□□ -1.02
AC087516.2-201ENST00000558963 TMF1P82094 1093 aa8.65□□□□□ -1.02
AC087516.2-201ENST00000558963 NGEFQ8N5V2 710 aa8.65□□□□□ -1.02
AC087516.2-201ENST00000558963 ARHGEF40Q8TER5 1519 aa8.65□□□□□ -1.02
AC087516.2-201ENST00000558963 TSPOAP1O95153 1857 aa8.65□□□□□ -1.02
AC087516.2-201ENST00000558963 SPAG9O60271 1321 aaKnown RBP8.64□□□□□ -1.03
AC087516.2-201ENST00000558963 CAMSAP1Q5T5Y3 1602 aa8.64□□□□□ -1.03
AC087516.2-201ENST00000558963 ADGRB1O14514 1584 aa8.63□□□□□ -1.03
AC087516.2-201ENST00000558963 POGZQ7Z3K3 1410 aa8.63□□□□□ -1.03
AC087516.2-201ENST00000558963 NCBP3Q53F19 620 aaKnown RBP8.63□□□□□ -1.03
AC087516.2-201ENST00000558963 B4GALNT3Q6L9W6 998 aa8.63□□□□□ -1.03
AC087516.2-201ENST00000558963 NOP58Q9Y2X3 529 aaKnown RBP8.63□□□□□ -1.03
AC087516.2-201ENST00000558963 ERVK-7P63135 1459 aa8.63□□□□□ -1.03
AC087516.2-201ENST00000558963 RICTORQ6R327 1708 aa8.63□□□□□ -1.03
AC087516.2-201ENST00000558963 VIRMAQ69YN4 1812 aaKnown RBP8.62□□□□□ -1.03
AC087516.2-201ENST00000558963 QRICH2Q9H0J4 1663 aa8.62□□□□□ -1.03
AC087516.2-201ENST00000558963 PUS7Q96PZ0 661 aaKnown RBP8.62□□□□□ -1.03
AC087516.2-201ENST00000558963 ARHGAP31Q2M1Z3 1444 aa8.62□□□□□ -1.03
AC087516.2-201ENST00000558963 CLTCQ00610 1675 aaKnown RBP8.62□□□□□ -1.03
AC087516.2-201ENST00000558963 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
AC087516.2-201ENST00000558963 ZNF521Q96K83 1311 aa8.62□□□□□ -1.03
AC087516.2-201ENST00000558963 RRP1P56182 461 aaKnown RBP8.62□□□□□ -1.03
AC087516.2-201ENST00000558963 UGGT1Q9NYU2 1555 aa8.61□□□□□ -1.03
AC087516.2-201ENST00000558963 ANKRD26Q9UPS8 1709 aa8.61□□□□□ -1.03
AC087516.2-201ENST00000558963 MS4A1P11836 297 aa8.61□□□□□ -1.03
AC087516.2-201ENST00000558963 NBPF1Q3BBV0 1214 aa8.61□□□□□ -1.03
AC087516.2-201ENST00000558963 ZFYVE9O95405 1425 aa8.61□□□□□ -1.03
AC087516.2-201ENST00000558963 ARHGEF28Q8N1W1 1705 aaKnown RBP8.6□□□□□ -1.03
AC087516.2-201ENST00000558963 ABCC3O15438 1527 aa8.6□□□□□ -1.03
AC087516.2-201ENST00000558963 NOS1P29475 1434 aa8.59□□□□□ -1.03
AC087516.2-201ENST00000558963 AMER1Q5JTC6 1135 aaPredicted RBP8.59□□□□□ -1.03
AC087516.2-201ENST00000558963 ZNF326Q5BKZ1 582 aaKnown RBP8.59□□□□□ -1.03
AC087516.2-201ENST00000558963 NINLQ9Y2I6 1382 aa8.59□□□□□ -1.03
AC087516.2-201ENST00000558963 RPGRIP1LQ68CZ1 1315 aa8.58□□□□□ -1.04
AC087516.2-201ENST00000558963 IPO9Q96P70 1041 aaKnown RBP8.58□□□□□ -1.04
AC087516.2-201ENST00000558963 SIGLEC1Q9BZZ2 1709 aa8.58□□□□□ -1.04
AC087516.2-201ENST00000558963 DIP2CQ9Y2E4 1556 aa8.58□□□□□ -1.04
AC087516.2-201ENST00000558963 RCAN3Q9UKA8 241 aa8.58□□□□□ -1.04
AC087516.2-201ENST00000558963 NEXMIFQ5QGS0 1516 aa8.57□□□□□ -1.04
AC087516.2-201ENST00000558963 TCERG1O14776 1098 aaKnown RBP8.57□□□□□ -1.04
AC087516.2-201ENST00000558963 DEKP35659 375 aaKnown RBP8.57□□□□□ -1.04
AC087516.2-201ENST00000558963 TRMT2AQ8IZ69 625 aaKnown RBP8.57□□□□□ -1.04
AC087516.2-201ENST00000558963 KDM2AQ9Y2K7 1162 aa8.57□□□□□ -1.04
AC087516.2-201ENST00000558963 POLR3AO14802 1390 aaPredicted RBP8.57□□□□□ -1.04
AC087516.2-201ENST00000558963 PREX1Q8TCU6 1659 aa8.57□□□□□ -1.04
AC087516.2-201ENST00000558963 FAM69CQ0P6D2 419 aa8.57□□□□□ -1.04
AC087516.2-201ENST00000558963 ADGRB2O60241 1585 aa8.57□□□□□ -1.04
AC087516.2-201ENST00000558963 ZMYM3Q14202 1370 aa8.57□□□□□ -1.04
AC087516.2-201ENST00000558963 KDM4FA0A1W2PPD8 638 aa8.56□□□□□ -1.04
AC087516.2-201ENST00000558963 PANK3Q9H999 370 aa8.56□□□□□ -1.04
AC087516.2-201ENST00000558963 MED14O60244 1454 aa8.56□□□□□ -1.04
AC087516.2-201ENST00000558963 ANP32AP39687 249 aaKnown RBP8.56□□□□□ -1.04
AC087516.2-201ENST00000558963 CCDC136Q96JN2 1154 aa8.56□□□□□ -1.04
AC087516.2-201ENST00000558963 NSD2O96028 1365 aa8.56□□□□□ -1.04
AC087516.2-201ENST00000558963 NPATQ14207 1427 aa8.55□□□□□ -1.04
AC087516.2-201ENST00000558963 PPP2R1AP30153 589 aa8.54□□□□□ -1.04
AC087516.2-201ENST00000558963 PAK3O75914 559 aaPredicted RBP8.54□□□□□ -1.04
AC087516.2-201ENST00000558963 CDC42BPGQ6DT37 1551 aa8.53□□□□□ -1.04
AC087516.2-201ENST00000558963 NKTRP30414 1462 aaKnown RBP8.53□□□□□ -1.04
AC087516.2-201ENST00000558963 KDM2BQ8NHM5 1336 aa8.53□□□□□ -1.04
AC087516.2-201ENST00000558963 AAMPQ13685 434 aa8.52□□□□□ -1.05
AC087516.2-201ENST00000558963 TMEM131LA2VDJ0 1609 aa8.52□□□□□ -1.05
AC087516.2-201ENST00000558963 AGLP35573 1532 aa8.52□□□□□ -1.05
AC087516.2-201ENST00000558963 KNSTRNQ9Y448 316 aa8.52□□□□□ -1.05
AC087516.2-201ENST00000558963 PLEKHH1Q9ULM0 1364 aa8.52□□□□□ -1.05
AC087516.2-201ENST00000558963 USP35Q9P2H5 1018 aa8.51□□□□□ -1.05
AC087516.2-201ENST00000558963 RGL3Q3MIN7 710 aa8.51□□□□□ -1.05
AC087516.2-201ENST00000558963 AFAP1Q8N556 730 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms