RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 MS4A1P11836 297 aa7.21□□□□□ -1.26
GABPB1-207ENST00000558335 TMF1P82094 1093 aa7.21□□□□□ -1.26
GABPB1-207ENST00000558335 ARID3AQ99856 593 aa7.21□□□□□ -1.26
GABPB1-207ENST00000558335 WDR7Q9Y4E6 1490 aa7.21□□□□□ -1.26
GABPB1-207ENST00000558335 ABCC2Q92887 1545 aa7.21□□□□□ -1.26
GABPB1-207ENST00000558335 KIAA1210Q9ULL0 1709 aa7.21□□□□□ -1.26
GABPB1-207ENST00000558335 EIF3AQ14152 1382 aaKnown RBP7.2□□□□□ -1.26
GABPB1-207ENST00000558335 PARD3Q8TEW0 1356 aa7.2□□□□□ -1.26
GABPB1-207ENST00000558335 RTEL1-TNFRSF6BF6WH68 1400 aa7.2□□□□□ -1.26
GABPB1-207ENST00000558335 FBLN2P98095 1184 aa7.2□□□□□ -1.26
GABPB1-207ENST00000558335 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.2□□□□□ -1.26
GABPB1-207ENST00000558335 NAP1L5Q96NT1 182 aaPredicted RBP7.2□□□□□ -1.26
GABPB1-207ENST00000558335 RNF17Q9BXT8 1623 aaKnown RBP7.19□□□□□ -1.26
GABPB1-207ENST00000558335 UHRF1BP1LA0JNW5 1464 aa7.19□□□□□ -1.26
GABPB1-207ENST00000558335 COL17A1Q9UMD9 1497 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-207ENST00000558335 CDK11BP21127 795 aaKnown RBP7.19□□□□□ -1.26
GABPB1-207ENST00000558335 DCAF11Q8TEB1 546 aa7.19□□□□□ -1.26
GABPB1-207ENST00000558335 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-207ENST00000558335 ZNF219Q9P2Y4 722 aaPredicted RBP7.19□□□□□ -1.26
GABPB1-207ENST00000558335 KANK1Q14678 1352 aa7.19□□□□□ -1.26
GABPB1-207ENST00000558335 ARID3CA6NKF2 412 aa7.18□□□□□ -1.26
GABPB1-207ENST00000558335 EFCAB2Q5VUJ9 269 aa7.18□□□□□ -1.26
GABPB1-207ENST00000558335 FAM43AQ8N2R8 423 aa7.18□□□□□ -1.26
GABPB1-207ENST00000558335 DDRGK1Q96HY6 314 aa7.18□□□□□ -1.26
GABPB1-207ENST00000558335 NOP58Q9Y2X3 529 aaKnown RBP7.18□□□□□ -1.26
GABPB1-207ENST00000558335 CENPJQ9HC77 1338 aaPredicted RBP7.18□□□□□ -1.26
GABPB1-207ENST00000558335 CEP152O94986 1710 aa7.18□□□□□ -1.26
GABPB1-207ENST00000558335 SYCP2Q9BX26 1530 aa7.17□□□□□ -1.26
GABPB1-207ENST00000558335 SYNMO15061 1565 aa7.17□□□□□ -1.26
GABPB1-207ENST00000558335 ST20-MTHFSA0A0A6YYL1 179 aa7.17□□□□□ -1.26
GABPB1-207ENST00000558335 TRHP20396 242 aaPredicted RBP7.17□□□□□ -1.26
GABPB1-207ENST00000558335 POLR3GLQ9BT43 218 aa7.17□□□□□ -1.26
GABPB1-207ENST00000558335 RCAN3Q9UKA8 241 aa7.17□□□□□ -1.26
GABPB1-207ENST00000558335 NPC1L1Q9UHC9 1359 aa7.17□□□□□ -1.26
GABPB1-207ENST00000558335 CHD1O14646 1710 aa7.16□□□□□ -1.26
GABPB1-207ENST00000558335 HSP90AA2PQ14568 343 aaPredicted RBP7.16□□□□□ -1.26
GABPB1-207ENST00000558335 SAMD1Q6SPF0 538 aaPredicted RBP7.16□□□□□ -1.26
GABPB1-207ENST00000558335 IPO9Q96P70 1041 aaKnown RBP7.16□□□□□ -1.26
GABPB1-207ENST00000558335 ZBTB47Q9UFB7 747 aaPredicted RBP7.16□□□□□ -1.26
GABPB1-207ENST00000558335 PLCH2O75038 1416 aa7.16□□□□□ -1.26
GABPB1-207ENST00000558335 BLMP54132 1417 aaPredicted RBP7.16□□□□□ -1.26
GABPB1-207ENST00000558335 TRPM2O94759 1503 aa7.16□□□□□ -1.26
GABPB1-207ENST00000558335 CLASP1Q7Z460 1538 aa7.16□□□□□ -1.26
GABPB1-207ENST00000558335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.16□□□□□ -1.26
GABPB1-207ENST00000558335 TET3O43151 1660 aa7.16□□□□□ -1.26
GABPB1-207ENST00000558335 SPHKAPQ2M3C7 1700 aa7.15□□□□□ -1.26
GABPB1-207ENST00000558335 HNRNPMP52272 730 aaKnown RBP eCLIP7.15□□□□□ -1.26
GABPB1-207ENST00000558335 RRP1P56182 461 aaKnown RBP7.15□□□□□ -1.26
GABPB1-207ENST00000558335 B4GALNT3Q6L9W6 998 aa7.15□□□□□ -1.26
GABPB1-207ENST00000558335 NINLQ9Y2I6 1382 aa7.15□□□□□ -1.26
GABPB1-207ENST00000558335 DEPDC5O75140 1603 aa7.15□□□□□ -1.27
GABPB1-207ENST00000558335 IQGAP1P46940 1657 aa7.15□□□□□ -1.27
GABPB1-207ENST00000558335 A0A0U1RQG5 324 aaPredicted RBP7.14□□□□□ -1.27
GABPB1-207ENST00000558335 PPM1GO15355 546 aaPredicted RBP7.14□□□□□ -1.27
GABPB1-207ENST00000558335 A2MP01023 1474 aa7.14□□□□□ -1.27
GABPB1-207ENST00000558335 ABCC1P33527 1531 aa7.14□□□□□ -1.27
GABPB1-207ENST00000558335 IRX6P78412 446 aaPredicted RBP7.14□□□□□ -1.27
GABPB1-207ENST00000558335 CALD1Q05682 793 aaKnown RBP7.14□□□□□ -1.27
GABPB1-207ENST00000558335 CCDC184Q52MB2 194 aa7.14□□□□□ -1.27
GABPB1-207ENST00000558335 TTC37Q6PGP7 1564 aa7.14□□□□□ -1.27
GABPB1-207ENST00000558335 C14orf37Q86TY3 774 aa7.14□□□□□ -1.27
GABPB1-207ENST00000558335 IPO4Q8TEX9 1081 aaKnown RBP7.14□□□□□ -1.27
GABPB1-207ENST00000558335 CHMP4AQ9BY43 222 aa7.14□□□□□ -1.27
GABPB1-207ENST00000558335 KDM2AQ9Y2K7 1162 aa7.14□□□□□ -1.27
GABPB1-207ENST00000558335 KDM5AP29375 1690 aaKnown RBP7.13□□□□□ -1.27
GABPB1-207ENST00000558335 CFAP74Q9C0B2 1584 aa7.13□□□□□ -1.27
GABPB1-207ENST00000558335 SCAF11Q99590 1463 aaKnown RBP7.13□□□□□ -1.27
GABPB1-207ENST00000558335 PIK3C2GO75747 1445 aa7.13□□□□□ -1.27
GABPB1-207ENST00000558335 WDR43Q15061 677 aaKnown RBP eCLIP7.13□□□□□ -1.27
GABPB1-207ENST00000558335 KNSTRNQ9Y448 316 aa7.13□□□□□ -1.27
GABPB1-207ENST00000558335 VGFO15240 615 aaPredicted RBP7.12□□□□□ -1.27
GABPB1-207ENST00000558335 IL27Q8NEV9 243 aa7.12□□□□□ -1.27
GABPB1-207ENST00000558335 KIF1BO60333 1816 aa7.12□□□□□ -1.27
GABPB1-207ENST00000558335 ZCCHC11Q5TAX3 1644 aaKnown RBP7.12□□□□□ -1.27
GABPB1-207ENST00000558335 MADDQ8WXG6 1647 aa7.12□□□□□ -1.27
GABPB1-207ENST00000558335 ASXL1Q8IXJ9 1541 aa7.11□□□□□ -1.27
GABPB1-207ENST00000558335 PTPRTO14522 1441 aa7.11□□□□□ -1.27
GABPB1-207ENST00000558335 PER1O15534 1290 aaPredicted RBP7.11□□□□□ -1.27
GABPB1-207ENST00000558335 ABCB7O75027 752 aa7.11□□□□□ -1.27
GABPB1-207ENST00000558335 CNGB1Q14028 1251 aaPredicted RBP7.11□□□□□ -1.27
GABPB1-207ENST00000558335 ANP32BQ92688 251 aaKnown RBP7.11□□□□□ -1.27
GABPB1-207ENST00000558335 MYOM2P54296 1465 aa7.11□□□□□ -1.27
GABPB1-207ENST00000558335 SPAG9O60271 1321 aaKnown RBP7.1□□□□□ -1.27
GABPB1-207ENST00000558335 HSP90AA1P07900 732 aaKnown RBP7.1□□□□□ -1.27
GABPB1-207ENST00000558335 CENPQQ7L2Z9 268 aaPredicted RBP7.1□□□□□ -1.27
GABPB1-207ENST00000558335 TAOK2Q9UL54 1235 aa7.1□□□□□ -1.27
GABPB1-207ENST00000558335 NAP1L2Q9ULW6 460 aaPredicted RBP7.1□□□□□ -1.27
GABPB1-207ENST00000558335 SBNO2Q9Y2G9 1366 aa7.09□□□□□ -1.27
GABPB1-207ENST00000558335 PLA2R1Q13018 1463 aa7.09□□□□□ -1.27
GABPB1-207ENST00000558335 VWDEQ8N2E2 1590 aa7.08□□□□□ -1.28
GABPB1-207ENST00000558335 INO80Q9ULG1 1556 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-207ENST00000558335 SETBP1Q9Y6X0 1596 aa7.08□□□□□ -1.28
GABPB1-207ENST00000558335 ZFYVE16Q7Z3T8 1539 aa7.08□□□□□ -1.28
GABPB1-207ENST00000558335 MYCNP04198 464 aaPredicted RBP7.08□□□□□ -1.28
GABPB1-207ENST00000558335 GOLGA2Q08379 1002 aa7.08□□□□□ -1.28
GABPB1-207ENST00000558335 TEX2Q8IWB9 1127 aa7.08□□□□□ -1.28
GABPB1-207ENST00000558335 PUS7Q96PZ0 661 aaKnown RBP7.08□□□□□ -1.28
GABPB1-207ENST00000558335 TESK2Q96S53 571 aa7.08□□□□□ -1.28
GABPB1-207ENST00000558335 PANK3Q9H999 370 aa7.08□□□□□ -1.28
GABPB1-207ENST00000558335 ABCA9Q8IUA7 1624 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms