RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 YEATS2Q9ULM3 1422 aa14.27□□□□□ -0.12
TPM1-210ENST00000558264 IQGAP1P46940 1657 aa14.27□□□□□ -0.12
TPM1-210ENST00000558264 BRD4O60885 1362 aaPredicted RBP14.27□□□□□ -0.12
TPM1-210ENST00000558264 FAM69CQ0P6D2 419 aa14.27□□□□□ -0.12
TPM1-210ENST00000558264 NOS1P29475 1434 aa14.27□□□□□ -0.13
TPM1-210ENST00000558264 NLRP13Q86W25 1043 aa14.27□□□□□ -0.13
TPM1-210ENST00000558264 NEO1Q92859 1461 aa14.26□□□□□ -0.13
TPM1-210ENST00000558264 KIF1BO60333 1816 aa14.26□□□□□ -0.13
TPM1-210ENST00000558264 DNAJC5Q9H3Z4 198 aa14.25□□□□□ -0.13
TPM1-210ENST00000558264 MAP3K4Q9Y6R4 1608 aa14.24□□□□□ -0.13
TPM1-210ENST00000558264 LMTK2Q8IWU2 1503 aa14.24□□□□□ -0.13
TPM1-210ENST00000558264 TMEM132EQ6IEE7 984 aa14.24□□□□□ -0.13
TPM1-210ENST00000558264 ABCC3O15438 1527 aa14.23□□□□□ -0.13
TPM1-210ENST00000558264 TRAK1Q9UPV9 953 aa14.23□□□□□ -0.13
TPM1-210ENST00000558264 LRPPRCP42704 1394 aaKnown RBP14.23□□□□□ -0.13
TPM1-210ENST00000558264 DIP2CQ9Y2E4 1556 aa14.23□□□□□ -0.13
TPM1-210ENST00000558264 KNSTRNQ9Y448 316 aa14.23□□□□□ -0.13
TPM1-210ENST00000558264 STAC3Q96MF2 364 aa14.22□□□□□ -0.13
TPM1-210ENST00000558264 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
TPM1-210ENST00000558264 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
TPM1-210ENST00000558264 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
TPM1-210ENST00000558264 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
TPM1-210ENST00000558264 MYOM2P54296 1465 aa14.21□□□□□ -0.13
TPM1-210ENST00000558264 NUDCQ9Y266 331 aa14.21□□□□□ -0.13
TPM1-210ENST00000558264 ADGRB3O60242 1522 aa14.21□□□□□ -0.13
TPM1-210ENST00000558264 RICTORQ6R327 1708 aa14.2□□□□□ -0.14
TPM1-210ENST00000558264 SMG6Q86US8 1419 aaKnown RBP14.2□□□□□ -0.14
TPM1-210ENST00000558264 TSPOAP1O95153 1857 aa14.2□□□□□ -0.14
TPM1-210ENST00000558264 SIGLEC1Q9BZZ2 1709 aa14.19□□□□□ -0.14
TPM1-210ENST00000558264 IFT172Q9UG01 1749 aa14.19□□□□□ -0.14
TPM1-210ENST00000558264 CAMSAP1Q5T5Y3 1602 aa14.18□□□□□ -0.14
TPM1-210ENST00000558264 CDCA8Q53HL2 280 aa14.18□□□□□ -0.14
TPM1-210ENST00000558264 B4GALNT3Q6L9W6 998 aa14.18□□□□□ -0.14
TPM1-210ENST00000558264 AMER1Q5JTC6 1135 aaPredicted RBP14.18□□□□□ -0.14
TPM1-210ENST00000558264 IDI1Q13907 227 aa14.17□□□□□ -0.14
TPM1-210ENST00000558264 ERVK-7P63135 1459 aa14.17□□□□□ -0.14
TPM1-210ENST00000558264 FBXO31Q5XUX0 539 aaPredicted RBP14.17□□□□□ -0.14
TPM1-210ENST00000558264 NEURL4Q96JN8 1562 aa14.16□□□□□ -0.14
TPM1-210ENST00000558264 PPP2R1AP30153 589 aa14.16□□□□□ -0.14
TPM1-210ENST00000558264 KIAA1210Q9ULL0 1709 aa14.16□□□□□ -0.14
TPM1-210ENST00000558264 SYNMO15061 1565 aa14.16□□□□□ -0.14
TPM1-210ENST00000558264 SAFB2Q14151 953 aaKnown RBP eCLIP14.16□□□□□ -0.14
TPM1-210ENST00000558264 MLECQ14165 292 aa14.16□□□□□ -0.14
TPM1-210ENST00000558264 MYOM1P52179 1685 aa14.15□□□□□ -0.14
TPM1-210ENST00000558264 NRXN1Q9ULB1 1477 aa14.15□□□□□ -0.14
TPM1-210ENST00000558264 CDCA7LQ96GN5 454 aa14.15□□□□□ -0.14
TPM1-210ENST00000558264 PIK3C2GO75747 1445 aa14.15□□□□□ -0.14
TPM1-210ENST00000558264 CENPJQ9HC77 1338 aaPredicted RBP14.15□□□□□ -0.14
TPM1-210ENST00000558264 C14orf93Q9H972 538 aaKnown RBP14.15□□□□□ -0.14
TPM1-210ENST00000558264 CARD14Q9BXL6 1004 aa14.14□□□□□ -0.15
TPM1-210ENST00000558264 PPP4R2Q9NY27 417 aa14.14□□□□□ -0.15
TPM1-210ENST00000558264 ADAMTS8Q9UP79 889 aa14.14□□□□□ -0.15
TPM1-210ENST00000558264 DIP2BQ9P265 1576 aa14.13□□□□□ -0.15
TPM1-210ENST00000558264 PPLO60437 1756 aa14.13□□□□□ -0.15
TPM1-210ENST00000558264 KDM5AP29375 1690 aaKnown RBP14.13□□□□□ -0.15
TPM1-210ENST00000558264 STK26Q9P289 416 aa14.13□□□□□ -0.15
TPM1-210ENST00000558264 ASXL1Q8IXJ9 1541 aa14.11□□□□□ -0.15
TPM1-210ENST00000558264 GLI2P10070 1586 aa14.11□□□□□ -0.15
TPM1-210ENST00000558264 TNNT2P45379 298 aaPredicted RBP14.11□□□□□ -0.15
TPM1-210ENST00000558264 SLC12A5Q9H2X9 1139 aa14.11□□□□□ -0.15
TPM1-210ENST00000558264 WDR43Q15061 677 aaKnown RBP eCLIP14.1□□□□□ -0.15
TPM1-210ENST00000558264 ADGRB1O14514 1584 aa14.1□□□□□ -0.15
TPM1-210ENST00000558264 RPGRIP1LQ68CZ1 1315 aa14.09□□□□□ -0.15
TPM1-210ENST00000558264 VGFO15240 615 aaPredicted RBP14.09□□□□□ -0.15
TPM1-210ENST00000558264 CCDC146Q8IYE0 955 aa14.08□□□□□ -0.15
TPM1-210ENST00000558264 NEXMIFQ5QGS0 1516 aa14.08□□□□□ -0.16
TPM1-210ENST00000558264 PIK3C2BO00750 1634 aa14.08□□□□□ -0.16
TPM1-210ENST00000558264 BLMP54132 1417 aaPredicted RBP14.07□□□□□ -0.16
TPM1-210ENST00000558264 STAG3Q9UJ98 1225 aa14.07□□□□□ -0.16
TPM1-210ENST00000558264 SETBP1Q9Y6X0 1596 aa14.07□□□□□ -0.16
TPM1-210ENST00000558264 QRICH2Q9H0J4 1663 aa14.07□□□□□ -0.16
TPM1-210ENST00000558264 ARHGAP31Q2M1Z3 1444 aa14.06□□□□□ -0.16
TPM1-210ENST00000558264 ERICH6BQ5W0A0 696 aa14.06□□□□□ -0.16
TPM1-210ENST00000558264 CABP2Q9NPB3 220 aa14.06□□□□□ -0.16
TPM1-210ENST00000558264 MYO5BQ9ULV0 1848 aa14.06□□□□□ -0.16
TPM1-210ENST00000558264 SLC52A1Q9NWF4 448 aa14.06□□□□□ -0.16
TPM1-210ENST00000558264 RCAN3Q9UKA8 241 aa14.06□□□□□ -0.16
TPM1-210ENST00000558264 RBM19Q9Y4C8 960 aaKnown RBP14.06□□□□□ -0.16
TPM1-210ENST00000558264 RNF123Q5XPI4 1314 aa14.05□□□□□ -0.16
TPM1-210ENST00000558264 NSD3Q9BZ95 1437 aa14.05□□□□□ -0.16
TPM1-210ENST00000558264 MYO3AQ8NEV4 1616 aa14.05□□□□□ -0.16
TPM1-210ENST00000558264 PREX1Q8TCU6 1659 aa14.04□□□□□ -0.16
TPM1-210ENST00000558264 ZC3H13Q5T200 1668 aaKnown RBP14.04□□□□□ -0.16
TPM1-210ENST00000558264 ZMYM4Q5VZL5 1548 aa14.04□□□□□ -0.16
TPM1-210ENST00000558264 SBNO2Q9Y2G9 1366 aa14.04□□□□□ -0.16
TPM1-210ENST00000558264 PLIN1O60240 522 aa14.03□□□□□ -0.16
TPM1-210ENST00000558264 PLEKHH1Q9ULM0 1364 aa14.03□□□□□ -0.16
TPM1-210ENST00000558264 SLC24A1O60721 1099 aa14.03□□□□□ -0.16
TPM1-210ENST00000558264 RRP1P56182 461 aaKnown RBP14.03□□□□□ -0.16
TPM1-210ENST00000558264 MINK1Q8N4C8 1332 aaPredicted RBP14.02□□□□□ -0.16
TPM1-210ENST00000558264 CCDC136Q96JN2 1154 aa14.02□□□□□ -0.17
TPM1-210ENST00000558264 PDE3BQ13370 1112 aa14.01□□□□□ -0.17
TPM1-210ENST00000558264 MORC1Q86VD1 984 aa14.01□□□□□ -0.17
TPM1-210ENST00000558264 TMEM131LA2VDJ0 1609 aa14.01□□□□□ -0.17
TPM1-210ENST00000558264 SRPK2P78362 688 aaKnown RBP14□□□□□ -0.17
TPM1-210ENST00000558264 EXOC6Q8TAG9 804 aa14□□□□□ -0.17
TPM1-210ENST00000558264 NPC1L1Q9UHC9 1359 aa14□□□□□ -0.17
TPM1-210ENST00000558264 TULP4Q9NRJ4 1543 aa14□□□□□ -0.17
TPM1-210ENST00000558264 PRAM1Q96QH2 718 aa14□□□□□ -0.17
TPM1-210ENST00000558264 EVC2Q86UK5 1308 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms