RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 ZFRQ96KR1 1074 aaKnown RBP9.89□□□□□ -0.83
FOXN3-218ENST00000557718 SEPT9Q9UHD8 586 aaPredicted RBP9.89□□□□□ -0.83
FOXN3-218ENST00000557718 CHD1O14646 1710 aa9.88□□□□□ -0.83
FOXN3-218ENST00000557718 BCAMP50895 628 aa9.88□□□□□ -0.83
FOXN3-218ENST00000557718 IFFO2Q5TF58 517 aa9.88□□□□□ -0.83
FOXN3-218ENST00000557718 SOWAHBA6NEL2 793 aa9.87□□□□□ -0.83
FOXN3-218ENST00000557718 FAM9AQ8IZU1 332 aaPredicted RBP9.87□□□□□ -0.83
FOXN3-218ENST00000557718 PRXQ9BXM0 1461 aa9.86□□□□□ -0.83
FOXN3-218ENST00000557718 IGF1RP08069 1367 aa9.86□□□□□ -0.83
FOXN3-218ENST00000557718 GRIN2BQ13224 1484 aa9.85□□□□□ -0.83
FOXN3-218ENST00000557718 GRXCR2A6NFK2 248 aa9.85□□□□□ -0.83
FOXN3-218ENST00000557718 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
FOXN3-218ENST00000557718 FAM98CQ17RN3 349 aaKnown RBP9.85□□□□□ -0.83
FOXN3-218ENST00000557718 TSKSQ9UJT2 592 aa9.85□□□□□ -0.83
FOXN3-218ENST00000557718 CTTNBP2Q8WZ74 1663 aa9.84□□□□□ -0.83
FOXN3-218ENST00000557718 SNAPC4Q5SXM2 1469 aa9.84□□□□□ -0.83
FOXN3-218ENST00000557718 PACS2Q86VP3 889 aa9.83□□□□□ -0.84
FOXN3-218ENST00000557718 RAPGEF2Q9Y4G8 1499 aa9.83□□□□□ -0.84
FOXN3-218ENST00000557718 WBP1LQ9NX94 342 aa9.82□□□□□ -0.84
FOXN3-218ENST00000557718 MAGI1Q96QZ7 1491 aaPredicted RBP9.81□□□□□ -0.84
FOXN3-218ENST00000557718 OSBPP22059 807 aa9.81□□□□□ -0.84
FOXN3-218ENST00000557718 CDCA7LQ96GN5 454 aa9.81□□□□□ -0.84
FOXN3-218ENST00000557718 PRSS12P56730 875 aa9.8□□□□□ -0.84
FOXN3-218ENST00000557718 NYAP1Q6ZVC0 841 aa9.8□□□□□ -0.84
FOXN3-218ENST00000557718 CERKQ8TCT0 537 aa9.8□□□□□ -0.84
FOXN3-218ENST00000557718 A0A0G2JS52 829 aa9.79□□□□□ -0.84
FOXN3-218ENST00000557718 LRCH3Q96II8 777 aa9.79□□□□□ -0.84
FOXN3-218ENST00000557718 TSHZ2Q9NRE2 1034 aa9.79□□□□□ -0.84
FOXN3-218ENST00000557718 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.79□□□□□ -0.84
FOXN3-218ENST00000557718 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
FOXN3-218ENST00000557718 GOLGA3Q08378 1498 aa9.79□□□□□ -0.84
FOXN3-218ENST00000557718 CARMIL1Q5VZK9 1371 aa9.78□□□□□ -0.84
FOXN3-218ENST00000557718 ITGBL1O95965 494 aaPredicted RBP9.78□□□□□ -0.84
FOXN3-218ENST00000557718 FHAD1B1AJZ9 1412 aa9.78□□□□□ -0.84
FOXN3-218ENST00000557718 CEP170Q5SW79 1584 aa9.77□□□□□ -0.85
FOXN3-218ENST00000557718 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
FOXN3-218ENST00000557718 TSR3Q9UJK0 312 aaKnown RBP9.77□□□□□ -0.85
FOXN3-218ENST00000557718 SYNJ2O15056 1496 aa9.77□□□□□ -0.85
FOXN3-218ENST00000557718 GRIN2AQ12879 1464 aa9.77□□□□□ -0.85
FOXN3-218ENST00000557718 LOC105371045A0A1W2PR82 267 aa9.76□□□□□ -0.85
FOXN3-218ENST00000557718 SMAPO00193 183 aa9.76□□□□□ -0.85
FOXN3-218ENST00000557718 RGS20O76081 388 aa9.76□□□□□ -0.85
FOXN3-218ENST00000557718 HPS5Q9UPZ3 1129 aa9.76□□□□□ -0.85
FOXN3-218ENST00000557718 C3orf80F5H4A9 247 aa9.75□□□□□ -0.85
FOXN3-218ENST00000557718 TATDN2Q93075 761 aa9.74□□□□□ -0.85
FOXN3-218ENST00000557718 NBPF26B4DH59 902 aa9.72□□□□□ -0.85
FOXN3-218ENST00000557718 SAMD7Q7Z3H4 446 aa9.72□□□□□ -0.85
FOXN3-218ENST00000557718 RBM27Q9P2N5 1060 aaKnown RBP9.72□□□□□ -0.85
FOXN3-218ENST00000557718 PNMA3Q9UL41 463 aa9.72□□□□□ -0.85
FOXN3-218ENST00000557718 PPP4CP60510 307 aa9.71□□□□□ -0.86
FOXN3-218ENST00000557718 KCNC4Q03721 635 aa9.71□□□□□ -0.86
FOXN3-218ENST00000557718 ARHGEF1Q92888 912 aaKnown RBP9.71□□□□□ -0.86
FOXN3-218ENST00000557718 NPDC1Q9NQX5 325 aaPredicted RBP9.71□□□□□ -0.86
FOXN3-218ENST00000557718 NUP160Q12769 1436 aa9.71□□□□□ -0.86
FOXN3-218ENST00000557718 KCNV2Q8TDN2 545 aa9.7□□□□□ -0.86
FOXN3-218ENST00000557718 CLASP1Q7Z460 1538 aa9.7□□□□□ -0.86
FOXN3-218ENST00000557718 IQGAP2Q13576 1575 aa9.7□□□□□ -0.86
FOXN3-218ENST00000557718 SHROOM2Q13796 1616 aa9.69□□□□□ -0.86
FOXN3-218ENST00000557718 NUDT18Q6ZVK8 323 aa9.69□□□□□ -0.86
FOXN3-218ENST00000557718 TNIKQ9UKE5 1360 aa9.69□□□□□ -0.86
FOXN3-218ENST00000557718 SAMD9Q5K651 1589 aa9.68□□□□□ -0.86
FOXN3-218ENST00000557718 MLLT3P42568 568 aaPredicted RBP9.68□□□□□ -0.86
FOXN3-218ENST00000557718 TTC13Q8NBP0 860 aa9.68□□□□□ -0.86
FOXN3-218ENST00000557718 PADI6Q6TGC4 694 aa9.66□□□□□ -0.86
FOXN3-218ENST00000557718 HDGFP51858 240 aaKnown RBP9.65□□□□□ -0.86
FOXN3-218ENST00000557718 KIAA0586Q9BVV6 1533 aa9.65□□□□□ -0.86
FOXN3-218ENST00000557718 CEP162Q5TB80 1403 aa9.65□□□□□ -0.87
FOXN3-218ENST00000557718 CHMP7Q8WUX9 453 aaPredicted RBP9.64□□□□□ -0.87
FOXN3-218ENST00000557718 UGGT2Q9NYU1 1516 aa9.64□□□□□ -0.87
FOXN3-218ENST00000557718 UBTFP17480 764 aaKnown RBP9.63□□□□□ -0.87
FOXN3-218ENST00000557718 ARHGAP35Q9NRY4 1499 aa9.63□□□□□ -0.87
FOXN3-218ENST00000557718 KIAA0556O60303 1618 aa9.63□□□□□ -0.87
FOXN3-218ENST00000557718 ERCC6L2Q5T890 1561 aa9.63□□□□□ -0.87
FOXN3-218ENST00000557718 LRRIQ1Q96JM4 1722 aa9.62□□□□□ -0.87
FOXN3-218ENST00000557718 RNF40O75150 1001 aa9.62□□□□□ -0.87
FOXN3-218ENST00000557718 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
FOXN3-218ENST00000557718 IRX2Q9BZI1 471 aaPredicted RBP9.62□□□□□ -0.87
FOXN3-218ENST00000557718 EFCAB5A4FU69 1503 aa9.61□□□□□ -0.87
FOXN3-218ENST00000557718 DISP1Q96F81 1524 aa9.61□□□□□ -0.87
FOXN3-218ENST00000557718 ARAP1Q96P48 1450 aa9.61□□□□□ -0.87
FOXN3-218ENST00000557718 CLIP1P30622 1438 aa9.6□□□□□ -0.87
FOXN3-218ENST00000557718 SWT1Q5T5J6 900 aaKnown RBP9.6□□□□□ -0.87
FOXN3-218ENST00000557718 P3H3Q8IVL6 736 aa9.59□□□□□ -0.87
FOXN3-218ENST00000557718 EYA1Q99502 592 aa9.59□□□□□ -0.87
FOXN3-218ENST00000557718 MTRQ99707 1265 aa9.59□□□□□ -0.87
FOXN3-218ENST00000557718 APLP1P51693 650 aa9.58□□□□□ -0.88
FOXN3-218ENST00000557718 PTGDRQ13258 359 aa9.58□□□□□ -0.88
FOXN3-218ENST00000557718 IL21Q9HBE4 155 aa9.58□□□□□ -0.88
FOXN3-218ENST00000557718 SLF2Q8IX21 1173 aa9.57□□□□□ -0.88
FOXN3-218ENST00000557718 NECTIN2Q92692 538 aa9.56□□□□□ -0.88
FOXN3-218ENST00000557718 FHOD3Q2V2M9 1422 aa9.56□□□□□ -0.88
FOXN3-218ENST00000557718 PCF11O94913 1555 aaKnown RBP9.55□□□□□ -0.88
FOXN3-218ENST00000557718 ZNF516Q92618 1163 aa9.55□□□□□ -0.88
FOXN3-218ENST00000557718 NUTM2FA1L443 756 aa9.54□□□□□ -0.88
FOXN3-218ENST00000557718 SEMA3EO15041 775 aa9.54□□□□□ -0.88
FOXN3-218ENST00000557718 RANGAP1P46060 587 aaPredicted RBP9.54□□□□□ -0.88
FOXN3-218ENST00000557718 PRG4Q92954 1404 aaPredicted RBP9.53□□□□□ -0.88
FOXN3-218ENST00000557718 SLC4A3P48751 1232 aa9.52□□□□□ -0.89
FOXN3-218ENST00000557718 PLCB2Q00722 1185 aa9.52□□□□□ -0.89
FOXN3-218ENST00000557718 ADGRG1Q9Y653 693 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms