RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SCAF1Q9H7N4 1312 aaKnown RBP21.06■□□□□ 0.96
SLIRP-207ENST00000556831 TOM1O60784 492 aa21.05■□□□□ 0.96
SLIRP-207ENST00000556831 EID1Q9Y6B2 187 aa21.05■□□□□ 0.96
SLIRP-207ENST00000556831 ZFYVE9O95405 1425 aa21.03■□□□□ 0.96
SLIRP-207ENST00000556831 ACIN1Q9UKV3 1341 aaKnown RBP21.02■□□□□ 0.95
SLIRP-207ENST00000556831 CLTCL1P53675 1640 aa21.01■□□□□ 0.95
SLIRP-207ENST00000556831 CHGAP10645 457 aaKnown RBP21.01■□□□□ 0.95
SLIRP-207ENST00000556831 NUTM2DQ5VT03 806 aaPredicted RBP21■□□□□ 0.95
SLIRP-207ENST00000556831 PIP4K2BP78356 416 aa20.99■□□□□ 0.95
SLIRP-207ENST00000556831 SLC4A1APQ9BWU0 796 aaKnown RBP20.99■□□□□ 0.95
SLIRP-207ENST00000556831 RIMS2Q9UQ26 1411 aa20.98■□□□□ 0.95
SLIRP-207ENST00000556831 SETD5Q9C0A6 1442 aa20.97■□□□□ 0.95
SLIRP-207ENST00000556831 FOXD1Q16676 465 aa20.97■□□□□ 0.95
SLIRP-207ENST00000556831 TRPM2O94759 1503 aa20.96■□□□□ 0.95
SLIRP-207ENST00000556831 HDGFP51858 240 aaKnown RBP20.96■□□□□ 0.95
SLIRP-207ENST00000556831 SLC26A8Q96RN1 970 aa20.96■□□□□ 0.95
SLIRP-207ENST00000556831 CPS1P31327 1500 aa20.95■□□□□ 0.94
SLIRP-207ENST00000556831 PPP1R15AO75807 674 aaPredicted RBP20.95■□□□□ 0.94
SLIRP-207ENST00000556831 LRRC7Q96NW7 1537 aa20.94■□□□□ 0.94
SLIRP-207ENST00000556831 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
SLIRP-207ENST00000556831 BCANQ96GW7 911 aa20.93■□□□□ 0.94
SLIRP-207ENST00000556831 XIRP1Q702N8 1843 aaKnown RBP20.92■□□□□ 0.94
SLIRP-207ENST00000556831 RGS17Q9UGC6 210 aaPredicted RBP20.91■□□□□ 0.94
SLIRP-207ENST00000556831 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.9■□□□□ 0.94
SLIRP-207ENST00000556831 RAB3GAP2Q9H2M9 1393 aa20.88■□□□□ 0.93
SLIRP-207ENST00000556831 PLEKHG1Q9ULL1 1385 aa20.88■□□□□ 0.93
SLIRP-207ENST00000556831 ADAMTS13Q76LX8 1427 aa20.87■□□□□ 0.93
SLIRP-207ENST00000556831 NRXN3Q9Y4C0 1643 aa20.87■□□□□ 0.93
SLIRP-207ENST00000556831 ZNF326Q5BKZ1 582 aaKnown RBP20.87■□□□□ 0.93
SLIRP-207ENST00000556831 RBM33Q96EV2 1170 aaKnown RBP20.87■□□□□ 0.93
SLIRP-207ENST00000556831 KIF1BO60333 1816 aa20.86■□□□□ 0.93
SLIRP-207ENST00000556831 NEXMIFQ5QGS0 1516 aa20.86■□□□□ 0.93
SLIRP-207ENST00000556831 MPHOSPH9Q99550 1183 aa20.85■□□□□ 0.93
SLIRP-207ENST00000556831 NWD1Q149M9 1564 aa20.85■□□□□ 0.93
SLIRP-207ENST00000556831 SRCAPQ6ZRS2 3230 aa20.84■□□□□ 0.93
SLIRP-207ENST00000556831 CHD2O14647 1828 aaKnown RBP20.83■□□□□ 0.92
SLIRP-207ENST00000556831 CCDC144AA2RUR9 1427 aa20.82■□□□□ 0.92
SLIRP-207ENST00000556831 KCNA6P17658 529 aa20.8■□□□□ 0.92
SLIRP-207ENST00000556831 PTPRUQ92729 1446 aa20.78■□□□□ 0.92
SLIRP-207ENST00000556831 TMEM94Q12767 1356 aa20.78■□□□□ 0.92
SLIRP-207ENST00000556831 SETBP1Q9Y6X0 1596 aa20.77■□□□□ 0.92
SLIRP-207ENST00000556831 DIP2AQ14689 1571 aa20.76■□□□□ 0.91
SLIRP-207ENST00000556831 PPLO60437 1756 aa20.75■□□□□ 0.91
SLIRP-207ENST00000556831 TBX22Q9Y458 520 aa20.75■□□□□ 0.91
SLIRP-207ENST00000556831 NKTRP30414 1462 aaKnown RBP20.75■□□□□ 0.91
SLIRP-207ENST00000556831 HRCP23327 699 aa20.74■□□□□ 0.91
SLIRP-207ENST00000556831 SETD1AO15047 1707 aaKnown RBP20.73■□□□□ 0.91
SLIRP-207ENST00000556831 SPATA31E1Q6ZUB1 1445 aa20.73■□□□□ 0.91
SLIRP-207ENST00000556831 POTEAQ6S8J7 498 aa20.73■□□□□ 0.91
SLIRP-207ENST00000556831 PROSER2Q86WR7 435 aaPredicted RBP20.73■□□□□ 0.91
SLIRP-207ENST00000556831 METP08581 1390 aa20.72■□□□□ 0.91
SLIRP-207ENST00000556831 XRN1Q8IZH2 1706 aaKnown RBP20.71■□□□□ 0.91
SLIRP-207ENST00000556831 IFT172Q9UG01 1749 aa20.71■□□□□ 0.91
SLIRP-207ENST00000556831 RPGRIP1LQ68CZ1 1315 aa20.71■□□□□ 0.91
SLIRP-207ENST00000556831 VGFO15240 615 aaPredicted RBP20.69■□□□□ 0.9
SLIRP-207ENST00000556831 RGL3Q3MIN7 710 aa20.69■□□□□ 0.9
SLIRP-207ENST00000556831 AMOTL2Q9Y2J4 779 aa20.67■□□□□ 0.9
SLIRP-207ENST00000556831 PIK3R4Q99570 1358 aa20.67■□□□□ 0.9
SLIRP-207ENST00000556831 ADGRF5Q8IZF2 1346 aa20.66■□□□□ 0.9
SLIRP-207ENST00000556831 UPF1Q92900 1129 aaKnown RBP eCLIP20.65■□□□□ 0.9
SLIRP-207ENST00000556831 ANKRD30BQ9BXX2 1392 aa20.63■□□□□ 0.89
SLIRP-207ENST00000556831 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.62■□□□□ 0.89
SLIRP-207ENST00000556831 C14orf37Q86TY3 774 aa20.61■□□□□ 0.89
SLIRP-207ENST00000556831 ASXL1Q8IXJ9 1541 aa20.61■□□□□ 0.89
SLIRP-207ENST00000556831 ROBO1Q9Y6N7 1651 aa20.61■□□□□ 0.89
SLIRP-207ENST00000556831 MSH6P52701 1360 aa20.59■□□□□ 0.89
SLIRP-207ENST00000556831 TRIM26Q12899 539 aaPredicted RBP20.59■□□□□ 0.89
SLIRP-207ENST00000556831 NALCNQ8IZF0 1738 aa20.58■□□□□ 0.88
SLIRP-207ENST00000556831 ROBO2Q9HCK4 1378 aa20.56■□□□□ 0.88
SLIRP-207ENST00000556831 PIK3C2GO75747 1445 aa20.55■□□□□ 0.88
SLIRP-207ENST00000556831 FAM135BQ49AJ0 1406 aa20.53■□□□□ 0.88
SLIRP-207ENST00000556831 NCOA3Q9Y6Q9 1424 aa20.53■□□□□ 0.88
SLIRP-207ENST00000556831 NRXN1Q9ULB1 1477 aa20.52■□□□□ 0.88
SLIRP-207ENST00000556831 TMEM132EQ6IEE7 984 aa20.52■□□□□ 0.88
SLIRP-207ENST00000556831 MYOM2P54296 1465 aa20.51■□□□□ 0.87
SLIRP-207ENST00000556831 SLAIN2Q9P270 581 aa20.51■□□□□ 0.87
SLIRP-207ENST00000556831 PTCH1Q13635 1447 aa20.5■□□□□ 0.87
SLIRP-207ENST00000556831 C19orf44Q9H6X5 657 aa20.49■□□□□ 0.87
SLIRP-207ENST00000556831 ADGRL3Q9HAR2 1447 aa20.49■□□□□ 0.87
SLIRP-207ENST00000556831 LAMC1P11047 1609 aa20.49■□□□□ 0.87
SLIRP-207ENST00000556831 DHX57Q6P158 1386 aaKnown RBP20.48■□□□□ 0.87
SLIRP-207ENST00000556831 ATF3P18847 181 aa20.48■□□□□ 0.87
SLIRP-207ENST00000556831 PRAG1Q86YV5 1406 aa20.47■□□□□ 0.87
SLIRP-207ENST00000556831 CFAP70Q5T0N1 1121 aa20.47■□□□□ 0.87
SLIRP-207ENST00000556831 STK26Q9P289 416 aa20.47■□□□□ 0.87
SLIRP-207ENST00000556831 PLEKHH1Q9ULM0 1364 aa20.46■□□□□ 0.87
SLIRP-207ENST00000556831 MST1RQ04912 1400 aa20.46■□□□□ 0.87
SLIRP-207ENST00000556831 CADPS2Q86UW7 1296 aa20.46■□□□□ 0.87
SLIRP-207ENST00000556831 PHLPP1O60346 1717 aa20.45■□□□□ 0.86
SLIRP-207ENST00000556831 DCAF11Q8TEB1 546 aa20.45■□□□□ 0.86
SLIRP-207ENST00000556831 KNDC1Q76NI1 1749 aa20.44■□□□□ 0.86
SLIRP-207ENST00000556831 WAPLQ7Z5K2 1190 aa20.44■□□□□ 0.86
SLIRP-207ENST00000556831 STAC3Q96MF2 364 aa20.44■□□□□ 0.86
SLIRP-207ENST00000556831 KDM2AQ9Y2K7 1162 aa20.44■□□□□ 0.86
SLIRP-207ENST00000556831 COL16A1Q07092 1604 aaPredicted RBP20.43■□□□□ 0.86
SLIRP-207ENST00000556831 C14orf93Q9H972 538 aaKnown RBP20.43■□□□□ 0.86
SLIRP-207ENST00000556831 LRPPRCP42704 1394 aaKnown RBP20.43■□□□□ 0.86
SLIRP-207ENST00000556831 DCCP43146 1447 aa20.43■□□□□ 0.86
SLIRP-207ENST00000556831 TECPR2O15040 1411 aa20.42■□□□□ 0.86
SLIRP-207ENST00000556831 YTHDC2Q9H6S0 1430 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms