RNA–Protein interactions for RNA: ENST00000555269.5

TRAPPC6B-205, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best)

Gene TRAPPC6B, Length 1,000 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-205ENST00000555269 MPHOSPH9Q99550 1183 aa18.53■□□□□ 0.56
TRAPPC6B-205ENST00000555269 POLR1AO95602 1720 aaPredicted RBP18.52■□□□□ 0.56
TRAPPC6B-205ENST00000555269 SETD5Q9C0A6 1442 aa18.52■□□□□ 0.56
TRAPPC6B-205ENST00000555269 HDGFP51858 240 aaKnown RBP18.51■□□□□ 0.55
TRAPPC6B-205ENST00000555269 RIMS2Q9UQ26 1411 aa18.5■□□□□ 0.55
TRAPPC6B-205ENST00000555269 ADGRB3O60242 1522 aa18.5■□□□□ 0.55
TRAPPC6B-205ENST00000555269 PPP1R15AO75807 674 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC6B-205ENST00000555269 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
TRAPPC6B-205ENST00000555269 ZNF326Q5BKZ1 582 aaKnown RBP18.49■□□□□ 0.55
TRAPPC6B-205ENST00000555269 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.48■□□□□ 0.55
TRAPPC6B-205ENST00000555269 TMEM131LA2VDJ0 1609 aa18.48■□□□□ 0.55
TRAPPC6B-205ENST00000555269 ZFYVE9O95405 1425 aa18.48■□□□□ 0.55
TRAPPC6B-205ENST00000555269 IQGAP1P46940 1657 aa18.47■□□□□ 0.55
TRAPPC6B-205ENST00000555269 RAB3GAP2Q9H2M9 1393 aa18.46■□□□□ 0.55
TRAPPC6B-205ENST00000555269 UBAP1LF5GYI3 381 aa18.46■□□□□ 0.55
TRAPPC6B-205ENST00000555269 KDM5AP29375 1690 aaKnown RBP18.45■□□□□ 0.54
TRAPPC6B-205ENST00000555269 MYO5BQ9ULV0 1848 aa18.44■□□□□ 0.54
TRAPPC6B-205ENST00000555269 KCNA6P17658 529 aa18.43■□□□□ 0.54
TRAPPC6B-205ENST00000555269 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
TRAPPC6B-205ENST00000555269 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
TRAPPC6B-205ENST00000555269 TBX22Q9Y458 520 aa18.41■□□□□ 0.54
TRAPPC6B-205ENST00000555269 SPHKAPQ2M3C7 1700 aa18.4■□□□□ 0.54
TRAPPC6B-205ENST00000555269 CPS1P31327 1500 aa18.4■□□□□ 0.54
TRAPPC6B-205ENST00000555269 PROSER2Q86WR7 435 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC6B-205ENST00000555269 IQSEC2Q5JU85 1478 aa18.39■□□□□ 0.53
TRAPPC6B-205ENST00000555269 TRPM2O94759 1503 aa18.39■□□□□ 0.53
TRAPPC6B-205ENST00000555269 CLTCL1P53675 1640 aa18.38■□□□□ 0.53
TRAPPC6B-205ENST00000555269 STRCP1A6NGW2 1772 aa18.38■□□□□ 0.53
TRAPPC6B-205ENST00000555269 PIP4K2BP78356 416 aa18.38■□□□□ 0.53
TRAPPC6B-205ENST00000555269 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
TRAPPC6B-205ENST00000555269 ACIN1Q9UKV3 1341 aaKnown RBP18.38■□□□□ 0.53
TRAPPC6B-205ENST00000555269 LRRC7Q96NW7 1537 aa18.38■□□□□ 0.53
TRAPPC6B-205ENST00000555269 KCNA4P22459 653 aa18.37■□□□□ 0.53
TRAPPC6B-205ENST00000555269 HRCP23327 699 aa18.37■□□□□ 0.53
TRAPPC6B-205ENST00000555269 TOM1O60784 492 aa18.36■□□□□ 0.53
TRAPPC6B-205ENST00000555269 HOXD11P31277 338 aaPredicted RBP18.36■□□□□ 0.53
TRAPPC6B-205ENST00000555269 ADAMTS13Q76LX8 1427 aa18.35■□□□□ 0.53
TRAPPC6B-205ENST00000555269 RNF216Q9NWF9 866 aaPredicted RBP18.34■□□□□ 0.53
TRAPPC6B-205ENST00000555269 VGFO15240 615 aaPredicted RBP18.33■□□□□ 0.52
TRAPPC6B-205ENST00000555269 TMEM94Q12767 1356 aa18.32■□□□□ 0.52
TRAPPC6B-205ENST00000555269 RPGRIP1LQ68CZ1 1315 aa18.32■□□□□ 0.52
TRAPPC6B-205ENST00000555269 AMOTL2Q9Y2J4 779 aa18.32■□□□□ 0.52
TRAPPC6B-205ENST00000555269 CCDC144AA2RUR9 1427 aa18.32■□□□□ 0.52
TRAPPC6B-205ENST00000555269 METP08581 1390 aa18.29■□□□□ 0.52
TRAPPC6B-205ENST00000555269 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
TRAPPC6B-205ENST00000555269 PTPRUQ92729 1446 aa18.28■□□□□ 0.52
TRAPPC6B-205ENST00000555269 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
TRAPPC6B-205ENST00000555269 ADGRF5Q8IZF2 1346 aa18.27■□□□□ 0.52
TRAPPC6B-205ENST00000555269 KIF1BO60333 1816 aa18.26■□□□□ 0.51
TRAPPC6B-205ENST00000555269 SPATA31E1Q6ZUB1 1445 aa18.26■□□□□ 0.51
TRAPPC6B-205ENST00000555269 ANKRD30BQ9BXX2 1392 aa18.26■□□□□ 0.51
TRAPPC6B-205ENST00000555269 HSPA1LP34931 641 aa18.25■□□□□ 0.51
TRAPPC6B-205ENST00000555269 PIK3R4Q99570 1358 aa18.24■□□□□ 0.51
TRAPPC6B-205ENST00000555269 C14orf37Q86TY3 774 aa18.23■□□□□ 0.51
TRAPPC6B-205ENST00000555269 ALKQ9UM73 1620 aa18.23■□□□□ 0.51
TRAPPC6B-205ENST00000555269 CHD2O14647 1828 aaKnown RBP18.22■□□□□ 0.51
TRAPPC6B-205ENST00000555269 NRXN3Q9Y4C0 1643 aa18.21■□□□□ 0.51
TRAPPC6B-205ENST00000555269 XIRP1Q702N8 1843 aaKnown RBP18.21■□□□□ 0.51
TRAPPC6B-205ENST00000555269 SETBP1Q9Y6X0 1596 aa18.21■□□□□ 0.51
TRAPPC6B-205ENST00000555269 NKTRP30414 1462 aaKnown RBP18.2■□□□□ 0.5
TRAPPC6B-205ENST00000555269 NWD1Q149M9 1564 aa18.2■□□□□ 0.5
TRAPPC6B-205ENST00000555269 DIP2AQ14689 1571 aa18.19■□□□□ 0.5
TRAPPC6B-205ENST00000555269 SLAIN2Q9P270 581 aa18.19■□□□□ 0.5
TRAPPC6B-205ENST00000555269 KDM2AQ9Y2K7 1162 aa18.19■□□□□ 0.5
TRAPPC6B-205ENST00000555269 MSH6P52701 1360 aa18.18■□□□□ 0.5
TRAPPC6B-205ENST00000555269 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
TRAPPC6B-205ENST00000555269 TMEM132EQ6IEE7 984 aa18.18■□□□□ 0.5
TRAPPC6B-205ENST00000555269 C19orf44Q9H6X5 657 aa18.18■□□□□ 0.5
TRAPPC6B-205ENST00000555269 STK26Q9P289 416 aa18.17■□□□□ 0.5
TRAPPC6B-205ENST00000555269 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
TRAPPC6B-205ENST00000555269 ATF3P18847 181 aa18.14■□□□□ 0.49
TRAPPC6B-205ENST00000555269 CFAP70Q5T0N1 1121 aa18.14■□□□□ 0.49
TRAPPC6B-205ENST00000555269 PPLO60437 1756 aa18.14■□□□□ 0.49
TRAPPC6B-205ENST00000555269 NCOA3Q9Y6Q9 1424 aa18.14■□□□□ 0.49
TRAPPC6B-205ENST00000555269 C14orf93Q9H972 538 aaKnown RBP18.13■□□□□ 0.49
TRAPPC6B-205ENST00000555269 DCAF8L1A6NGE4 600 aa18.12■□□□□ 0.49
TRAPPC6B-205ENST00000555269 ROBO2Q9HCK4 1378 aa18.12■□□□□ 0.49
TRAPPC6B-205ENST00000555269 FAM135BQ49AJ0 1406 aa18.12■□□□□ 0.49
TRAPPC6B-205ENST00000555269 CADPS2Q86UW7 1296 aa18.11■□□□□ 0.49
TRAPPC6B-205ENST00000555269 WAPLQ7Z5K2 1190 aa18.1■□□□□ 0.49
TRAPPC6B-205ENST00000555269 SIN3AQ96ST3 1273 aa18.1■□□□□ 0.49
TRAPPC6B-205ENST00000555269 DHX57Q6P158 1386 aaKnown RBP18.09■□□□□ 0.49
TRAPPC6B-205ENST00000555269 PIK3C2GO75747 1445 aa18.08■□□□□ 0.49
TRAPPC6B-205ENST00000555269 XRN1Q8IZH2 1706 aaKnown RBP18.08■□□□□ 0.48
TRAPPC6B-205ENST00000555269 NEUROD1Q13562 356 aa18.06■□□□□ 0.48
TRAPPC6B-205ENST00000555269 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
TRAPPC6B-205ENST00000555269 LRPPRCP42704 1394 aaKnown RBP18.05■□□□□ 0.48
TRAPPC6B-205ENST00000555269 NRXN1Q9ULB1 1477 aa18.05■□□□□ 0.48
TRAPPC6B-205ENST00000555269 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC6B-205ENST00000555269 IFT172Q9UG01 1749 aa18.04■□□□□ 0.48
TRAPPC6B-205ENST00000555269 ABCC11Q96J66 1382 aa18.04■□□□□ 0.48
TRAPPC6B-205ENST00000555269 BRINP3Q76B58 766 aa18.03■□□□□ 0.48
TRAPPC6B-205ENST00000555269 DISP3Q9P2K9 1392 aa18.03■□□□□ 0.48
TRAPPC6B-205ENST00000555269 PLEKHH1Q9ULM0 1364 aa18.03■□□□□ 0.48
TRAPPC6B-205ENST00000555269 MYOM2P54296 1465 aa18.02■□□□□ 0.48
TRAPPC6B-205ENST00000555269 PTCH1Q13635 1447 aa18.02■□□□□ 0.48
TRAPPC6B-205ENST00000555269 STAC3Q96MF2 364 aa18.02■□□□□ 0.48
TRAPPC6B-205ENST00000555269 YTHDC2Q9H6S0 1430 aaKnown RBP18.02■□□□□ 0.48
TRAPPC6B-205ENST00000555269 ADGRL3Q9HAR2 1447 aa18.02■□□□□ 0.48
TRAPPC6B-205ENST00000555269 ASXL1Q8IXJ9 1541 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms