RNA–Protein interactions for RNA: ENST00000553247.1

LINC02407-202, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 3 BASIC

Gene LINC02407, Length 1,083 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-202ENST00000553247 GOLGA8CPA6NN73 597 aa13.08□□□□□ -0.32
LINC02407-202ENST00000553247 CDK13Q14004 1512 aaKnown RBP13.08□□□□□ -0.32
LINC02407-202ENST00000553247 CLIP1P30622 1438 aa13.07□□□□□ -0.32
LINC02407-202ENST00000553247 PHF8Q9UPP1 1060 aa13.07□□□□□ -0.32
LINC02407-202ENST00000553247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.07□□□□□ -0.32
LINC02407-202ENST00000553247 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
LINC02407-202ENST00000553247 RAPGEF3O95398 923 aa13.06□□□□□ -0.32
LINC02407-202ENST00000553247 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
LINC02407-202ENST00000553247 PLCH2O75038 1416 aa13.05□□□□□ -0.32
LINC02407-202ENST00000553247 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
LINC02407-202ENST00000553247 NRG2O14511 850 aaPredicted RBP13.04□□□□□ -0.32
LINC02407-202ENST00000553247 KCNK17Q96T54 332 aa13.04□□□□□ -0.32
LINC02407-202ENST00000553247 TROQ12816 1431 aaPredicted RBP13.04□□□□□ -0.32
LINC02407-202ENST00000553247 EFCAB2Q5VUJ9 269 aa13.03□□□□□ -0.32
LINC02407-202ENST00000553247 FANCAO15360 1455 aa13.02□□□□□ -0.33
LINC02407-202ENST00000553247 CCDC18Q5T9S5 1454 aa13.01□□□□□ -0.33
LINC02407-202ENST00000553247 DENND4BO75064 1496 aaPredicted RBP13□□□□□ -0.33
LINC02407-202ENST00000553247 FYCO1Q9BQS8 1478 aa13□□□□□ -0.33
LINC02407-202ENST00000553247 TTC37Q6PGP7 1564 aa12.99□□□□□ -0.33
LINC02407-202ENST00000553247 LOC105371045A0A1W2PR82 267 aa12.98□□□□□ -0.33
LINC02407-202ENST00000553247 BHMG1C9JSJ3 638 aaPredicted RBP12.98□□□□□ -0.33
LINC02407-202ENST00000553247 LRRIQ1Q96JM4 1722 aa12.97□□□□□ -0.33
LINC02407-202ENST00000553247 SCAPERQ9BY12 1400 aa12.96□□□□□ -0.33
LINC02407-202ENST00000553247 PCF11O94913 1555 aaKnown RBP12.96□□□□□ -0.33
LINC02407-202ENST00000553247 CFAP74Q9C0B2 1584 aa12.96□□□□□ -0.33
LINC02407-202ENST00000553247 SLC4A5Q9BY07 1137 aa12.96□□□□□ -0.33
LINC02407-202ENST00000553247 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
LINC02407-202ENST00000553247 CEP162Q5TB80 1403 aa12.96□□□□□ -0.34
LINC02407-202ENST00000553247 MAGI2Q86UL8 1455 aa12.95□□□□□ -0.34
LINC02407-202ENST00000553247 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
LINC02407-202ENST00000553247 MRPL50Q8N5N7 158 aaKnown RBP12.94□□□□□ -0.34
LINC02407-202ENST00000553247 KIF14Q15058 1648 aa12.94□□□□□ -0.34
LINC02407-202ENST00000553247 FBXO41Q8TF61 875 aa12.93□□□□□ -0.34
LINC02407-202ENST00000553247 FBXO3Q9UK99 471 aa12.93□□□□□ -0.34
LINC02407-202ENST00000553247 RICTORQ6R327 1708 aa12.93□□□□□ -0.34
LINC02407-202ENST00000553247 POGZQ7Z3K3 1410 aa12.91□□□□□ -0.34
LINC02407-202ENST00000553247 AFAP1Q8N556 730 aa12.91□□□□□ -0.34
LINC02407-202ENST00000553247 ZMYM4Q5VZL5 1548 aa12.91□□□□□ -0.34
LINC02407-202ENST00000553247 MYO5CQ9NQX4 1742 aa12.91□□□□□ -0.34
LINC02407-202ENST00000553247 KCNC4Q03721 635 aa12.89□□□□□ -0.35
LINC02407-202ENST00000553247 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
LINC02407-202ENST00000553247 GPATCH8Q9UKJ3 1502 aaKnown RBP12.88□□□□□ -0.35
LINC02407-202ENST00000553247 YEATS2Q9ULM3 1422 aa12.88□□□□□ -0.35
LINC02407-202ENST00000553247 ZNF518AQ6AHZ1 1483 aa12.87□□□□□ -0.35
LINC02407-202ENST00000553247 CDC42BPBQ9Y5S2 1711 aa12.87□□□□□ -0.35
LINC02407-202ENST00000553247 ARID4BQ4LE39 1312 aaPredicted RBP12.87□□□□□ -0.35
LINC02407-202ENST00000553247 ATP10AO60312 1499 aa12.86□□□□□ -0.35
LINC02407-202ENST00000553247 MTUS2Q5JR59 1369 aa12.86□□□□□ -0.35
LINC02407-202ENST00000553247 ARHGEF40Q8TER5 1519 aa12.86□□□□□ -0.35
LINC02407-202ENST00000553247 ZFYVE16Q7Z3T8 1539 aa12.85□□□□□ -0.35
LINC02407-202ENST00000553247 ARHGEF12Q9NZN5 1544 aa12.85□□□□□ -0.35
LINC02407-202ENST00000553247 CFDP1Q9UEE9 299 aaPredicted RBP12.85□□□□□ -0.35
LINC02407-202ENST00000553247 ADAMTSL3P82987 1691 aa12.85□□□□□ -0.35
LINC02407-202ENST00000553247 MLH3Q9UHC1 1453 aa12.85□□□□□ -0.35
LINC02407-202ENST00000553247 PREX2Q70Z35 1606 aa12.84□□□□□ -0.35
LINC02407-202ENST00000553247 CCNB3Q8WWL7 1395 aa12.84□□□□□ -0.35
LINC02407-202ENST00000553247 NLRP6P59044 892 aa12.84□□□□□ -0.35
LINC02407-202ENST00000553247 KIAA1107Q9UPP5 1409 aa12.84□□□□□ -0.35
LINC02407-202ENST00000553247 KDM5CP41229 1560 aa12.83□□□□□ -0.36
LINC02407-202ENST00000553247 VPS8Q8N3P4 1428 aa12.83□□□□□ -0.36
LINC02407-202ENST00000553247 TRAPPC8Q9Y2L5 1435 aa12.83□□□□□ -0.36
LINC02407-202ENST00000553247 TMC2Q8TDI7 906 aa12.83□□□□□ -0.36
LINC02407-202ENST00000553247 PTCD2Q8WV60 388 aaKnown RBP12.83□□□□□ -0.36
LINC02407-202ENST00000553247 CDC42BPAQ5VT25 1732 aa12.82□□□□□ -0.36
LINC02407-202ENST00000553247 PTPRMP28827 1452 aa12.82□□□□□ -0.36
LINC02407-202ENST00000553247 BCORL1Q5H9F3 1711 aa12.82□□□□□ -0.36
LINC02407-202ENST00000553247 HNRNPMP52272 730 aaKnown RBP eCLIP12.81□□□□□ -0.36
LINC02407-202ENST00000553247 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
LINC02407-202ENST00000553247 ZNF777Q9ULD5 760 aaPredicted RBP12.81□□□□□ -0.36
LINC02407-202ENST00000553247 ABCC1P33527 1531 aa12.81□□□□□ -0.36
LINC02407-202ENST00000553247 C9orf84Q5VXU9 1444 aa12.8□□□□□ -0.36
LINC02407-202ENST00000553247 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
LINC02407-202ENST00000553247 LMTK3Q96Q04 1460 aa12.79□□□□□ -0.36
LINC02407-202ENST00000553247 MAP3K1Q13233 1512 aa12.79□□□□□ -0.36
LINC02407-202ENST00000553247 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
LINC02407-202ENST00000553247 VASPP50552 380 aaPredicted RBP12.78□□□□□ -0.36
LINC02407-202ENST00000553247 RSPH4AQ5TD94 716 aa12.78□□□□□ -0.36
LINC02407-202ENST00000553247 NBPF3Q9H094 633 aa12.78□□□□□ -0.36
LINC02407-202ENST00000553247 PRKD2Q9BZL6 878 aa12.77□□□□□ -0.37
LINC02407-202ENST00000553247 SPAG9O60271 1321 aaKnown RBP12.77□□□□□ -0.37
LINC02407-202ENST00000553247 ZNF644Q9H582 1327 aaPredicted RBP12.77□□□□□ -0.37
LINC02407-202ENST00000553247 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.37
LINC02407-202ENST00000553247 REREQ9P2R6 1566 aa12.77□□□□□ -0.37
LINC02407-202ENST00000553247 TREML4Q6UXN2 200 aa12.76□□□□□ -0.37
LINC02407-202ENST00000553247 FBXO22Q8NEZ5 403 aa12.76□□□□□ -0.37
LINC02407-202ENST00000553247 TIAM1Q13009 1591 aa12.76□□□□□ -0.37
LINC02407-202ENST00000553247 ITSN2Q9NZM3 1697 aa12.76□□□□□ -0.37
LINC02407-202ENST00000553247 SIGLEC1Q9BZZ2 1709 aa12.76□□□□□ -0.37
LINC02407-202ENST00000553247 AGLP35573 1532 aa12.75□□□□□ -0.37
LINC02407-202ENST00000553247 MLECQ14165 292 aa12.75□□□□□ -0.37
LINC02407-202ENST00000553247 NCOA2Q15596 1464 aa12.75□□□□□ -0.37
LINC02407-202ENST00000553247 KANK4Q5T7N3 995 aaPredicted RBP12.75□□□□□ -0.37
LINC02407-202ENST00000553247 LRRC9Q6ZRR7 1453 aa12.75□□□□□ -0.37
LINC02407-202ENST00000553247 NYAP1Q6ZVC0 841 aa12.75□□□□□ -0.37
LINC02407-202ENST00000553247 MBD5Q9P267 1494 aa12.75□□□□□ -0.37
LINC02407-202ENST00000553247 MADDQ8WXG6 1647 aa12.74□□□□□ -0.37
LINC02407-202ENST00000553247 DIP2CQ9Y2E4 1556 aa12.74□□□□□ -0.37
LINC02407-202ENST00000553247 ZBED2Q9BTP6 218 aa12.74□□□□□ -0.37
LINC02407-202ENST00000553247 STK17AQ9UEE5 414 aa12.73□□□□□ -0.37
LINC02407-202ENST00000553247 KIDINS220Q9ULH0 1771 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms