RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 TSPY4P0CV99 314 aa20.32■□□□□ 0.84
SNRPF-204ENST00000552085 TSPY10P0CW01 314 aa20.32■□□□□ 0.84
SNRPF-204ENST00000552085 STAG3Q9UJ98 1225 aa20.32■□□□□ 0.84
SNRPF-204ENST00000552085 ARHGAP31Q2M1Z3 1444 aa20.31■□□□□ 0.84
SNRPF-204ENST00000552085 CEP162Q5TB80 1403 aa20.31■□□□□ 0.84
SNRPF-204ENST00000552085 RBM6P78332 1123 aaKnown RBP20.31■□□□□ 0.84
SNRPF-204ENST00000552085 ATAD2Q6PL18 1390 aa20.3■□□□□ 0.84
SNRPF-204ENST00000552085 QTRT2Q9H974 415 aaKnown RBP20.28■□□□□ 0.84
SNRPF-204ENST00000552085 MAST1Q9Y2H9 1570 aa20.28■□□□□ 0.84
SNRPF-204ENST00000552085 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.27■□□□□ 0.84
SNRPF-204ENST00000552085 NCOA3Q9Y6Q9 1424 aa20.26■□□□□ 0.83
SNRPF-204ENST00000552085 BCANQ96GW7 911 aa20.23■□□□□ 0.83
SNRPF-204ENST00000552085 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
SNRPF-204ENST00000552085 IDI1Q13907 227 aa20.21■□□□□ 0.83
SNRPF-204ENST00000552085 C14orf37Q86TY3 774 aa20.21■□□□□ 0.83
SNRPF-204ENST00000552085 C8orf37Q96NL8 207 aa20.21■□□□□ 0.83
SNRPF-204ENST00000552085 NGLY1Q96IV0 654 aa20.2■□□□□ 0.82
SNRPF-204ENST00000552085 ADGRB3O60242 1522 aa20.19■□□□□ 0.82
SNRPF-204ENST00000552085 ATF3P18847 181 aa20.18■□□□□ 0.82
SNRPF-204ENST00000552085 SETD5Q9C0A6 1442 aa20.18■□□□□ 0.82
SNRPF-204ENST00000552085 DUOX2Q9NRD8 1548 aa20.17■□□□□ 0.82
SNRPF-204ENST00000552085 BRINP3Q76B58 766 aa20.17■□□□□ 0.82
SNRPF-204ENST00000552085 C19orf44Q9H6X5 657 aa20.17■□□□□ 0.82
SNRPF-204ENST00000552085 LRP5O75197 1615 aa20.16■□□□□ 0.82
SNRPF-204ENST00000552085 NHSL1Q5SYE7 1610 aa20.16■□□□□ 0.82
SNRPF-204ENST00000552085 CCDC125Q86Z20 511 aa20.14■□□□□ 0.81
SNRPF-204ENST00000552085 MYO5BQ9ULV0 1848 aa20.13■□□□□ 0.81
SNRPF-204ENST00000552085 PLEKHG1Q9ULL1 1385 aa20.13■□□□□ 0.81
SNRPF-204ENST00000552085 ASXL1Q8IXJ9 1541 aa20.12■□□□□ 0.81
SNRPF-204ENST00000552085 LRRC59Q96AG4 307 aaKnown RBP20.11■□□□□ 0.81
SNRPF-204ENST00000552085 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
SNRPF-204ENST00000552085 ZFYVE9O95405 1425 aa20.09■□□□□ 0.81
SNRPF-204ENST00000552085 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.81
SNRPF-204ENST00000552085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
SNRPF-204ENST00000552085 NOS1P29475 1434 aa20.07■□□□□ 0.8
SNRPF-204ENST00000552085 ERBINQ96RT1 1412 aa20.07■□□□□ 0.8
SNRPF-204ENST00000552085 KANK1Q14678 1352 aa20.07■□□□□ 0.8
SNRPF-204ENST00000552085 TRPC5Q9UL62 973 aaPredicted RBP20.06■□□□□ 0.8
SNRPF-204ENST00000552085 LMTK2Q8IWU2 1503 aa20.06■□□□□ 0.8
SNRPF-204ENST00000552085 PPP1R15AO75807 674 aaPredicted RBP20.05■□□□□ 0.8
SNRPF-204ENST00000552085 USP21Q9UK80 565 aa20.05■□□□□ 0.8
SNRPF-204ENST00000552085 GCC2Q8IWJ2 1684 aa20.04■□□□□ 0.8
SNRPF-204ENST00000552085 DCCP43146 1447 aa20.04■□□□□ 0.8
SNRPF-204ENST00000552085 ADAMTS2O95450 1211 aa20.04■□□□□ 0.8
SNRPF-204ENST00000552085 EP400Q96L91 3159 aa20.04■□□□□ 0.8
SNRPF-204ENST00000552085 RIMS2Q9UQ26 1411 aa20.03■□□□□ 0.8
SNRPF-204ENST00000552085 HDGFP51858 240 aaKnown RBP20.03■□□□□ 0.8
SNRPF-204ENST00000552085 SLC52A1Q9NWF4 448 aa20.03■□□□□ 0.8
SNRPF-204ENST00000552085 KIF15Q9NS87 1388 aa20.03■□□□□ 0.8
SNRPF-204ENST00000552085 MST1RQ04912 1400 aa20.02■□□□□ 0.79
SNRPF-204ENST00000552085 PIK3R4Q99570 1358 aa20.01■□□□□ 0.79
SNRPF-204ENST00000552085 ATRNO75882 1429 aa20.01■□□□□ 0.79
SNRPF-204ENST00000552085 ADAMTS13Q76LX8 1427 aa20■□□□□ 0.79
SNRPF-204ENST00000552085 TMEM131LA2VDJ0 1609 aa19.98■□□□□ 0.79
SNRPF-204ENST00000552085 CROCC2H7BZ55 1655 aa19.98■□□□□ 0.79
SNRPF-204ENST00000552085 BLMP54132 1417 aaPredicted RBP19.97■□□□□ 0.79
SNRPF-204ENST00000552085 FNBP4Q8N3X1 1017 aaPredicted RBP19.97■□□□□ 0.79
SNRPF-204ENST00000552085 DDX17Q92841 729 aaKnown RBP19.97■□□□□ 0.79
SNRPF-204ENST00000552085 RRP7BPQ9NSQ0 103 aa19.96■□□□□ 0.79
SNRPF-204ENST00000552085 TRPM2O94759 1503 aa19.96■□□□□ 0.79
SNRPF-204ENST00000552085 MYOM3Q5VTT5 1437 aa19.95■□□□□ 0.78
SNRPF-204ENST00000552085 PTCH1Q13635 1447 aa19.94■□□□□ 0.78
SNRPF-204ENST00000552085 AMOTL2Q9Y2J4 779 aa19.94■□□□□ 0.78
SNRPF-204ENST00000552085 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
SNRPF-204ENST00000552085 PTPRUQ92729 1446 aa19.93■□□□□ 0.78
SNRPF-204ENST00000552085 DEFB132Q7Z7B7 95 aa19.92■□□□□ 0.78
SNRPF-204ENST00000552085 LAMC1P11047 1609 aa19.91■□□□□ 0.78
SNRPF-204ENST00000552085 XRN1Q8IZH2 1706 aaKnown RBP19.91■□□□□ 0.78
SNRPF-204ENST00000552085 MARF1Q9Y4F3 1742 aaKnown RBP19.9■□□□□ 0.78
SNRPF-204ENST00000552085 RPRD2Q5VT52 1461 aaKnown RBP19.89■□□□□ 0.77
SNRPF-204ENST00000552085 BRWD3Q6RI45 1802 aa19.89■□□□□ 0.77
SNRPF-204ENST00000552085 COL22A1Q8NFW1 1626 aaPredicted RBP19.88■□□□□ 0.77
SNRPF-204ENST00000552085 UNC13BO14795 1591 aa19.87■□□□□ 0.77
SNRPF-204ENST00000552085 SF3B2Q13435 895 aaKnown RBP19.87■□□□□ 0.77
SNRPF-204ENST00000552085 BCL9LQ86UU0 1499 aa19.86■□□□□ 0.77
SNRPF-204ENST00000552085 SPHKAPQ2M3C7 1700 aa19.86■□□□□ 0.77
SNRPF-204ENST00000552085 HRCP23327 699 aa19.86■□□□□ 0.77
SNRPF-204ENST00000552085 ABCC5O15440 1437 aa19.85■□□□□ 0.77
SNRPF-204ENST00000552085 NALCNQ8IZF0 1738 aa19.85■□□□□ 0.77
SNRPF-204ENST00000552085 PSDA5PKW4 1024 aaPredicted RBP19.85■□□□□ 0.77
SNRPF-204ENST00000552085 GJD4Q96KN9 370 aaPredicted RBP19.85■□□□□ 0.77
SNRPF-204ENST00000552085 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.85■□□□□ 0.77
SNRPF-204ENST00000552085 CHGAP10645 457 aaKnown RBP19.83■□□□□ 0.77
SNRPF-204ENST00000552085 YY1P25490 414 aa19.83■□□□□ 0.77
SNRPF-204ENST00000552085 ADGRL3Q9HAR2 1447 aa19.83■□□□□ 0.76
SNRPF-204ENST00000552085 SOS2Q07890 1332 aaPredicted RBP19.82■□□□□ 0.76
SNRPF-204ENST00000552085 GLI3P10071 1580 aa19.81■□□□□ 0.76
SNRPF-204ENST00000552085 C1orf167Q5SNV9 1468 aa19.8■□□□□ 0.76
SNRPF-204ENST00000552085 NRXN3Q9Y4C0 1643 aa19.8■□□□□ 0.76
SNRPF-204ENST00000552085 MYOM2P54296 1465 aa19.79■□□□□ 0.76
SNRPF-204ENST00000552085 DAPK1P53355 1430 aa19.78■□□□□ 0.76
SNRPF-204ENST00000552085 RALGAPBQ86X10 1494 aa19.77■□□□□ 0.76
SNRPF-204ENST00000552085 ANKRD30AQ9BXX3 1397 aa19.76■□□□□ 0.75
SNRPF-204ENST00000552085 PTPN23Q9H3S7 1636 aa19.76■□□□□ 0.75
SNRPF-204ENST00000552085 BAG6P46379 1132 aa19.72■□□□□ 0.75
SNRPF-204ENST00000552085 ORAI2Q96SN7 254 aa19.72■□□□□ 0.75
SNRPF-204ENST00000552085 CHIC2Q9UKJ5 165 aa19.71■□□□□ 0.75
SNRPF-204ENST00000552085 METP08581 1390 aa19.7■□□□□ 0.74
SNRPF-204ENST00000552085 IFFO2Q5TF58 517 aa19.7■□□□□ 0.74
SNRPF-204ENST00000552085 UNC5CLQ8IV45 518 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms