RNA–Protein interactions for RNA: ENST00000550898.1

KRR1-204, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-204ENST00000550898 ARHGEF12Q9NZN5 1544 aa11.06□□□□□ -0.64
KRR1-204ENST00000550898 AFAP1Q8N556 730 aa11.06□□□□□ -0.64
KRR1-204ENST00000550898 MYT1LQ9UL68 1186 aa11.06□□□□□ -0.64
KRR1-204ENST00000550898 YEATS2Q9ULM3 1422 aa11.06□□□□□ -0.64
KRR1-204ENST00000550898 TRAPPC8Q9Y2L5 1435 aa11.06□□□□□ -0.64
KRR1-204ENST00000550898 MLH3Q9UHC1 1453 aa11.05□□□□□ -0.64
KRR1-204ENST00000550898 VGFO15240 615 aaPredicted RBP11.04□□□□□ -0.64
KRR1-204ENST00000550898 ARID4BQ4LE39 1312 aaPredicted RBP11.04□□□□□ -0.64
KRR1-204ENST00000550898 HECW2Q9P2P5 1572 aa11.03□□□□□ -0.64
KRR1-204ENST00000550898 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
KRR1-204ENST00000550898 C9orf84Q5VXU9 1444 aa11.03□□□□□ -0.64
KRR1-204ENST00000550898 MIA2Q96PC5 1412 aa11.03□□□□□ -0.64
KRR1-204ENST00000550898 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
KRR1-204ENST00000550898 HNRNPMP52272 730 aaKnown RBP eCLIP11.03□□□□□ -0.64
KRR1-204ENST00000550898 EMP3P54852 163 aa11.03□□□□□ -0.64
KRR1-204ENST00000550898 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
KRR1-204ENST00000550898 SPAG9O60271 1321 aaKnown RBP11.03□□□□□ -0.64
KRR1-204ENST00000550898 ATP10AO60312 1499 aa11.02□□□□□ -0.65
KRR1-204ENST00000550898 CAMSAP2Q08AD1 1489 aa11.02□□□□□ -0.65
KRR1-204ENST00000550898 ZNF644Q9H582 1327 aaPredicted RBP11.02□□□□□ -0.65
KRR1-204ENST00000550898 RSPH4AQ5TD94 716 aa11.01□□□□□ -0.65
KRR1-204ENST00000550898 HS3ST6Q96QI5 342 aa11.01□□□□□ -0.65
KRR1-204ENST00000550898 KRTAP3-3Q9BYR6 98 aa11.01□□□□□ -0.65
KRR1-204ENST00000550898 KRTAP3-2Q9BYR7 98 aa11.01□□□□□ -0.65
KRR1-204ENST00000550898 CCDC141Q6ZP82 1450 aa11□□□□□ -0.65
KRR1-204ENST00000550898 MBD5Q9P267 1494 aa11□□□□□ -0.65
KRR1-204ENST00000550898 FAM205CA6NFA0 338 aa11□□□□□ -0.65
KRR1-204ENST00000550898 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
KRR1-204ENST00000550898 SOX12O15370 315 aa10.99□□□□□ -0.65
KRR1-204ENST00000550898 PKD2Q13563 968 aa10.99□□□□□ -0.65
KRR1-204ENST00000550898 DIP2CQ9Y2E4 1556 aa10.99□□□□□ -0.65
KRR1-204ENST00000550898 G3V3G9 751 aa10.98□□□□□ -0.65
KRR1-204ENST00000550898 FBXO22Q8NEZ5 403 aa10.98□□□□□ -0.65
KRR1-204ENST00000550898 BCL11BQ9C0K0 894 aaPredicted RBP10.98□□□□□ -0.65
KRR1-204ENST00000550898 ATP7AQ04656 1500 aa10.98□□□□□ -0.65
KRR1-204ENST00000550898 REREQ9P2R6 1566 aa10.98□□□□□ -0.65
KRR1-204ENST00000550898 RTEL1-TNFRSF6BF6WH68 1400 aa10.97□□□□□ -0.65
KRR1-204ENST00000550898 FGD6Q6ZV73 1430 aa10.97□□□□□ -0.65
KRR1-204ENST00000550898 ABCA6Q8N139 1617 aa10.97□□□□□ -0.65
KRR1-204ENST00000550898 ARHGEF5Q12774 1597 aa10.96□□□□□ -0.65
KRR1-204ENST00000550898 INO80Q9ULG1 1556 aaPredicted RBP10.96□□□□□ -0.65
KRR1-204ENST00000550898 TSPY4P0CV99 314 aa10.96□□□□□ -0.65
KRR1-204ENST00000550898 TSPY10P0CW01 314 aa10.96□□□□□ -0.65
KRR1-204ENST00000550898 MMRN1Q13201 1228 aa10.96□□□□□ -0.65
KRR1-204ENST00000550898 RGL2O15211 777 aa10.95□□□□□ -0.66
KRR1-204ENST00000550898 MLECQ14165 292 aa10.95□□□□□ -0.66
KRR1-204ENST00000550898 AGLP35573 1532 aa10.94□□□□□ -0.66
KRR1-204ENST00000550898 A2MP01023 1474 aa10.94□□□□□ -0.66
KRR1-204ENST00000550898 TCOF1Q13428 1488 aaKnown RBP10.94□□□□□ -0.66
KRR1-204ENST00000550898 MFRPQ9BY79 579 aa10.94□□□□□ -0.66
KRR1-204ENST00000550898 KIDINS220Q9ULH0 1771 aa10.94□□□□□ -0.66
KRR1-204ENST00000550898 BCORL1Q5H9F3 1711 aa10.94□□□□□ -0.66
KRR1-204ENST00000550898 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
KRR1-204ENST00000550898 PTPN23Q9H3S7 1636 aa10.93□□□□□ -0.66
KRR1-204ENST00000550898 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
KRR1-204ENST00000550898 STK24Q9Y6E0 443 aa10.92□□□□□ -0.66
KRR1-204ENST00000550898 PTPRMP28827 1452 aa10.92□□□□□ -0.66
KRR1-204ENST00000550898 SHANK2Q9UPX8 1470 aa10.92□□□□□ -0.66
KRR1-204ENST00000550898 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
KRR1-204ENST00000550898 MADDQ8WXG6 1647 aa10.91□□□□□ -0.66
KRR1-204ENST00000550898 DHX29Q7Z478 1369 aaKnown RBP10.9□□□□□ -0.66
KRR1-204ENST00000550898 PLXNC1O60486 1568 aa10.9□□□□□ -0.66
KRR1-204ENST00000550898 MAST1Q9Y2H9 1570 aa10.9□□□□□ -0.66
KRR1-204ENST00000550898 SIGLEC1Q9BZZ2 1709 aa10.9□□□□□ -0.66
KRR1-204ENST00000550898 FAM50AQ14320 339 aaKnown RBP10.9□□□□□ -0.66
KRR1-204ENST00000550898 ESF1Q9H501 851 aaKnown RBP10.9□□□□□ -0.66
KRR1-204ENST00000550898 ABCC5O15440 1437 aa10.9□□□□□ -0.66
KRR1-204ENST00000550898 DAPK1P53355 1430 aa10.9□□□□□ -0.66
KRR1-204ENST00000550898 PPARGC1BQ86YN6 1023 aaKnown RBP10.88□□□□□ -0.67
KRR1-204ENST00000550898 CNTLNQ9NXG0 1405 aa10.88□□□□□ -0.67
KRR1-204ENST00000550898 STK25O00506 426 aa10.87□□□□□ -0.67
KRR1-204ENST00000550898 DOK7Q18PE1 504 aa10.87□□□□□ -0.67
KRR1-204ENST00000550898 ZNF710Q8N1W2 664 aa10.87□□□□□ -0.67
KRR1-204ENST00000550898 ADGBQ8N7X0 1667 aa10.87□□□□□ -0.67
KRR1-204ENST00000550898 DNMT1P26358 1616 aaKnown RBP10.87□□□□□ -0.67
KRR1-204ENST00000550898 NLRP6P59044 892 aa10.86□□□□□ -0.67
KRR1-204ENST00000550898 GPR153Q6NV75 609 aa10.86□□□□□ -0.67
KRR1-204ENST00000550898 GGT6Q6P531 493 aa10.86□□□□□ -0.67
KRR1-204ENST00000550898 ANKRD30AQ9BXX3 1397 aa10.86□□□□□ -0.67
KRR1-204ENST00000550898 KIF15Q9NS87 1388 aa10.86□□□□□ -0.67
KRR1-204ENST00000550898 RIMS1Q86UR5 1692 aaKnown RBP10.85□□□□□ -0.67
KRR1-204ENST00000550898 KIF3BO15066 747 aa10.85□□□□□ -0.67
KRR1-204ENST00000550898 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.85□□□□□ -0.67
KRR1-204ENST00000550898 DUOX2Q9NRD8 1548 aa10.84□□□□□ -0.67
KRR1-204ENST00000550898 KHSRPQ92945 711 aaKnown RBP eCLIP10.84□□□□□ -0.67
KRR1-204ENST00000550898 FER1L4A9Z1Z3 1794 aa10.84□□□□□ -0.67
KRR1-204ENST00000550898 ERBINQ96RT1 1412 aa10.84□□□□□ -0.67
KRR1-204ENST00000550898 CROCC2H7BZ55 1655 aa10.83□□□□□ -0.68
KRR1-204ENST00000550898 ADGRL2O95490 1459 aa10.83□□□□□ -0.68
KRR1-204ENST00000550898 RRP7BPQ9NSQ0 103 aa10.83□□□□□ -0.68
KRR1-204ENST00000550898 CHIC2Q9UKJ5 165 aa10.83□□□□□ -0.68
KRR1-204ENST00000550898 FAM135AQ9P2D6 1515 aa10.83□□□□□ -0.68
KRR1-204ENST00000550898 VARS2Q5ST30 1063 aaKnown RBP10.82□□□□□ -0.68
KRR1-204ENST00000550898 RRBP1Q9P2E9 1410 aaKnown RBP10.82□□□□□ -0.68
KRR1-204ENST00000550898 ERBB3P21860 1342 aa10.82□□□□□ -0.68
KRR1-204ENST00000550898 KDM5DQ9BY66 1539 aa10.81□□□□□ -0.68
KRR1-204ENST00000550898 KIF3CO14782 793 aa10.81□□□□□ -0.68
KRR1-204ENST00000550898 NCOA1Q15788 1441 aa10.81□□□□□ -0.68
KRR1-204ENST00000550898 EIF2AK4Q9P2K8 1649 aaKnown RBP10.8□□□□□ -0.68
KRR1-204ENST00000550898 ZMYM3Q14202 1370 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms