RNA–Protein interactions for RNA: ENST00000549858.1

AC133555.3-203, humanhuman

APPRIS ALT2 TSL 2

Gene AC133555.3, Length 397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC133555.3-203ENST00000549858 NPHP4O75161 1426 aaPredicted RBP28.17■■■□□ 2.1
AC133555.3-203ENST00000549858 KIF1BO60333 1816 aa28.16■■■□□ 2.1
AC133555.3-203ENST00000549858 ZNF326Q5BKZ1 582 aaKnown RBP28.15■■■□□ 2.1
AC133555.3-203ENST00000549858 HDGFP51858 240 aaKnown RBP28.13■■■□□ 2.09
AC133555.3-203ENST00000549858 NUTM2DQ5VT03 806 aaPredicted RBP28.12■■■□□ 2.09
AC133555.3-203ENST00000549858 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.12■■■□□ 2.09
AC133555.3-203ENST00000549858 IQGAP1P46940 1657 aa28.1■■■□□ 2.09
AC133555.3-203ENST00000549858 PPP1R15AO75807 674 aaPredicted RBP28.09■■■□□ 2.09
AC133555.3-203ENST00000549858 SPATA31E1Q6ZUB1 1445 aa28.07■■■□□ 2.08
AC133555.3-203ENST00000549858 RGL3Q3MIN7 710 aa28.06■■■□□ 2.08
AC133555.3-203ENST00000549858 SENP3Q9H4L4 574 aaPredicted RBP28.06■■■□□ 2.08
AC133555.3-203ENST00000549858 DHX57Q6P158 1386 aaKnown RBP28.05■■■□□ 2.08
AC133555.3-203ENST00000549858 NEXMIFQ5QGS0 1516 aa28.04■■■□□ 2.08
AC133555.3-203ENST00000549858 PLEKHG1Q9ULL1 1385 aa28.04■■■□□ 2.08
AC133555.3-203ENST00000549858 RPGRIP1LQ68CZ1 1315 aa28.03■■■□□ 2.08
AC133555.3-203ENST00000549858 BCANQ96GW7 911 aa28.03■■■□□ 2.08
AC133555.3-203ENST00000549858 ZNF335Q9H4Z2 1342 aaPredicted RBP28.01■■■□□ 2.07
AC133555.3-203ENST00000549858 SLC26A8Q96RN1 970 aa28.01■■■□□ 2.07
AC133555.3-203ENST00000549858 VGFO15240 615 aaPredicted RBP27.96■■■□□ 2.07
AC133555.3-203ENST00000549858 PPLO60437 1756 aa27.95■■■□□ 2.06
AC133555.3-203ENST00000549858 LTBP4Q8N2S1 1624 aa27.95■■■□□ 2.06
AC133555.3-203ENST00000549858 ADAMTS13Q76LX8 1427 aa27.94■■■□□ 2.06
AC133555.3-203ENST00000549858 TBX22Q9Y458 520 aa27.92■■■□□ 2.06
AC133555.3-203ENST00000549858 SIN3AQ96ST3 1273 aa27.9■■■□□ 2.06
AC133555.3-203ENST00000549858 SETBP1Q9Y6X0 1596 aa27.9■■■□□ 2.06
AC133555.3-203ENST00000549858 ADGRF5Q8IZF2 1346 aa27.9■■■□□ 2.06
AC133555.3-203ENST00000549858 IFT172Q9UG01 1749 aa27.89■■■□□ 2.06
AC133555.3-203ENST00000549858 NRXN3Q9Y4C0 1643 aa27.89■■■□□ 2.06
AC133555.3-203ENST00000549858 CERKQ8TCT0 537 aa27.87■■■□□ 2.05
AC133555.3-203ENST00000549858 STRCP1A6NGW2 1772 aa27.86■■■□□ 2.05
AC133555.3-203ENST00000549858 KCNA6P17658 529 aa27.85■■■□□ 2.05
AC133555.3-203ENST00000549858 DIP2AQ14689 1571 aa27.85■■■□□ 2.05
AC133555.3-203ENST00000549858 NEUROD1Q13562 356 aa27.83■■■□□ 2.05
AC133555.3-203ENST00000549858 CPS1P31327 1500 aa27.82■■■□□ 2.04
AC133555.3-203ENST00000549858 DCAF11Q8TEB1 546 aa27.82■■■□□ 2.04
AC133555.3-203ENST00000549858 KDM2AQ9Y2K7 1162 aa27.81■■■□□ 2.04
AC133555.3-203ENST00000549858 MYOM2P54296 1465 aa27.81■■■□□ 2.04
AC133555.3-203ENST00000549858 ALKQ9UM73 1620 aa27.79■■■□□ 2.04
AC133555.3-203ENST00000549858 METP08581 1390 aa27.79■■■□□ 2.04
AC133555.3-203ENST00000549858 PIK3R4Q99570 1358 aa27.79■■■□□ 2.04
AC133555.3-203ENST00000549858 CHD2O14647 1828 aaKnown RBP27.78■■■□□ 2.04
AC133555.3-203ENST00000549858 NRXN1Q9ULB1 1477 aa27.77■■■□□ 2.04
AC133555.3-203ENST00000549858 PIK3C2GO75747 1445 aa27.77■■■□□ 2.04
AC133555.3-203ENST00000549858 PTPRUQ92729 1446 aa27.77■■■□□ 2.04
AC133555.3-203ENST00000549858 NWD1Q149M9 1564 aa27.77■■■□□ 2.04
AC133555.3-203ENST00000549858 STAC3Q96MF2 364 aa27.75■■■□□ 2.03
AC133555.3-203ENST00000549858 AMOTL2Q9Y2J4 779 aa27.75■■■□□ 2.03
AC133555.3-203ENST00000549858 LRRC7Q96NW7 1537 aa27.75■■■□□ 2.03
AC133555.3-203ENST00000549858 SETD1AO15047 1707 aaKnown RBP27.75■■■□□ 2.03
AC133555.3-203ENST00000549858 L3MBTL2Q969R5 705 aa27.73■■■□□ 2.03
AC133555.3-203ENST00000549858 C14orf93Q9H972 538 aaKnown RBP27.72■■■□□ 2.03
AC133555.3-203ENST00000549858 PROSER2Q86WR7 435 aaPredicted RBP27.71■■■□□ 2.03
AC133555.3-203ENST00000549858 NKTRP30414 1462 aaKnown RBP27.7■■■□□ 2.03
AC133555.3-203ENST00000549858 CFAP70Q5T0N1 1121 aa27.7■■■□□ 2.02
AC133555.3-203ENST00000549858 IQSEC2Q5JU85 1478 aa27.7■■■□□ 2.02
AC133555.3-203ENST00000549858 RBM33Q96EV2 1170 aaKnown RBP27.69■■■□□ 2.02
AC133555.3-203ENST00000549858 TMEM132EQ6IEE7 984 aa27.67■■■□□ 2.02
AC133555.3-203ENST00000549858 XRN1Q8IZH2 1706 aaKnown RBP27.67■■■□□ 2.02
AC133555.3-203ENST00000549858 TMEM94Q12767 1356 aa27.66■■■□□ 2.02
AC133555.3-203ENST00000549858 ASXL1Q8IXJ9 1541 aa27.65■■■□□ 2.02
AC133555.3-203ENST00000549858 XIRP1Q702N8 1843 aaKnown RBP27.64■■■□□ 2.01
AC133555.3-203ENST00000549858 CCER1Q8TC90 406 aaPredicted RBP27.62■■■□□ 2.01
AC133555.3-203ENST00000549858 CLSPNQ9HAW4 1339 aa27.62■■■□□ 2.01
AC133555.3-203ENST00000549858 LAMC1P11047 1609 aa27.61■■■□□ 2.01
AC133555.3-203ENST00000549858 PRAG1Q86YV5 1406 aa27.6■■■□□ 2.01
AC133555.3-203ENST00000549858 STK26Q9P289 416 aa27.6■■■□□ 2.01
AC133555.3-203ENST00000549858 LRPPRCP42704 1394 aaKnown RBP27.6■■■□□ 2.01
AC133555.3-203ENST00000549858 TONSLQ96HA7 1378 aa27.6■■■□□ 2.01
AC133555.3-203ENST00000549858 FBXO41Q8TF61 875 aa27.58■■■□□ 2.01
AC133555.3-203ENST00000549858 ROBO2Q9HCK4 1378 aa27.57■■■□□ 2
AC133555.3-203ENST00000549858 YTHDC2Q9H6S0 1430 aaKnown RBP27.57■■■□□ 2
AC133555.3-203ENST00000549858 ABCC11Q96J66 1382 aa27.56■■■□□ 2
AC133555.3-203ENST00000549858 UBAP1LF5GYI3 381 aa27.55■■■□□ 2
AC133555.3-203ENST00000549858 PTCH1Q13635 1447 aa27.55■■■□□ 2
AC133555.3-203ENST00000549858 NCOA3Q9Y6Q9 1424 aa27.55■■■□□ 2
AC133555.3-203ENST00000549858 ADGRB1O14514 1584 aa27.55■■■□□ 2
AC133555.3-203ENST00000549858 TECPR2O15040 1411 aa27.53■■■□□ 2
AC133555.3-203ENST00000549858 C14orf37Q86TY3 774 aa27.52■■■□□ 2
AC133555.3-203ENST00000549858 TOM1O60784 492 aa27.51■■□□□ 1.99
AC133555.3-203ENST00000549858 NBPF1Q3BBV0 1214 aa27.51■■□□□ 1.99
AC133555.3-203ENST00000549858 MSH6P52701 1360 aa27.5■■□□□ 1.99
AC133555.3-203ENST00000549858 NBPF8Q3BBV2 869 aa27.5■■□□□ 1.99
AC133555.3-203ENST00000549858 KIAA1210Q9ULL0 1709 aa27.5■■□□□ 1.99
AC133555.3-203ENST00000549858 WAPLQ7Z5K2 1190 aa27.49■■□□□ 1.99
AC133555.3-203ENST00000549858 KNDC1Q76NI1 1749 aa27.49■■□□□ 1.99
AC133555.3-203ENST00000549858 C19orf44Q9H6X5 657 aa27.48■■□□□ 1.99
AC133555.3-203ENST00000549858 ILDR1Q86SU0 546 aaPredicted RBP27.47■■□□□ 1.99
AC133555.3-203ENST00000549858 SIRT1Q96EB6 747 aa27.47■■□□□ 1.99
AC133555.3-203ENST00000549858 TRAK1Q9UPV9 953 aa27.47■■□□□ 1.99
AC133555.3-203ENST00000549858 PLEKHH1Q9ULM0 1364 aa27.46■■□□□ 1.99
AC133555.3-203ENST00000549858 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.44■■□□□ 1.98
AC133555.3-203ENST00000549858 FAM135BQ49AJ0 1406 aa27.43■■□□□ 1.98
AC133555.3-203ENST00000549858 ADGRL3Q9HAR2 1447 aa27.43■■□□□ 1.98
AC133555.3-203ENST00000549858 PIP4K2BP78356 416 aa27.43■■□□□ 1.98
AC133555.3-203ENST00000549858 DLC1Q96QB1 1528 aa27.42■■□□□ 1.98
AC133555.3-203ENST00000549858 TRPM1Q7Z4N2 1603 aa27.42■■□□□ 1.98
AC133555.3-203ENST00000549858 TIMELESSQ9UNS1 1208 aa27.42■■□□□ 1.98
AC133555.3-203ENST00000549858 PRAM1Q96QH2 718 aa27.41■■□□□ 1.98
AC133555.3-203ENST00000549858 NALCNQ8IZF0 1738 aa27.41■■□□□ 1.98
AC133555.3-203ENST00000549858 ATF3P18847 181 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms