RNA–Protein interactions for RNA: ENST00000549858.1

AC133555.3-203, humanhuman

APPRIS ALT2 TSL 2

Gene AC133555.3, Length 397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC133555.3-203ENST00000549858 NISCHQ9Y2I1 1504 aa46.12■■■■■ 4.97
AC133555.3-203ENST00000549858 CCDC180Q9P1Z9 1646 aa40.83■■■■■ 4.13
AC133555.3-203ENST00000549858 ABCC9O60706 1549 aa39.82■■■■□ 3.97
AC133555.3-203ENST00000549858 DCAF8L2P0C7V8 631 aa38.51■■■■□ 3.76
AC133555.3-203ENST00000549858 ZCCHC6Q5VYS8 1495 aaKnown RBP38.45■■■■□ 3.75
AC133555.3-203ENST00000549858 NACADO15069 1562 aa38.36■■■■□ 3.73
AC133555.3-203ENST00000549858 RB1CC1Q8TDY2 1594 aa38.35■■■■□ 3.73
AC133555.3-203ENST00000549858 MYO15BQ96JP2 1530 aa38.19■■■■□ 3.7
AC133555.3-203ENST00000549858 DCAF1Q9Y4B6 1507 aa38.13■■■■□ 3.69
AC133555.3-203ENST00000549858 UNC13AQ9UPW8 1703 aa37.49■■■■□ 3.59
AC133555.3-203ENST00000549858 SCRIBQ14160 1630 aa37.33■■■■□ 3.57
AC133555.3-203ENST00000549858 PABPN1Q86U42 306 aaKnown RBP eCLIP37.3■■■■□ 3.56
AC133555.3-203ENST00000549858 BICRAQ9NZM4 1560 aa37.22■■■■□ 3.55
AC133555.3-203ENST00000549858 SHROOM4Q9ULL8 1493 aa36.76■■■■□ 3.48
AC133555.3-203ENST00000549858 DNAJC5BQ9UF47 199 aa36.41■■■■□ 3.42
AC133555.3-203ENST00000549858 EIF4G1Q04637 1599 aaKnown RBP36.2■■■■□ 3.39
AC133555.3-203ENST00000549858 CC2D2AQ9P2K1 1620 aa36.01■■■■□ 3.35
AC133555.3-203ENST00000549858 CECR2Q9BXF3 1484 aa35.94■■■■□ 3.34
AC133555.3-203ENST00000549858 SMARCA4P51532 1647 aa35.72■■■■□ 3.31
AC133555.3-203ENST00000549858 BAZ1AQ9NRL2 1556 aaPredicted RBP35.7■■■■□ 3.31
AC133555.3-203ENST00000549858 MROH2BQ7Z745 1585 aa35.57■■■■□ 3.28
AC133555.3-203ENST00000549858 ATAD2BQ9ULI0 1458 aa35.49■■■■□ 3.27
AC133555.3-203ENST00000549858 NCAPD3P42695 1498 aa35.43■■■■□ 3.26
AC133555.3-203ENST00000549858 SMARCA2P51531 1590 aa35.42■■■■□ 3.26
AC133555.3-203ENST00000549858 PEG3Q9GZU2 1588 aa35.35■■■■□ 3.25
AC133555.3-203ENST00000549858 RSF1Q96T23 1441 aaPredicted RBP35.25■■■■□ 3.23
AC133555.3-203ENST00000549858 HMGXB3Q12766 1538 aa35.23■■■■□ 3.23
AC133555.3-203ENST00000549858 WIZO95785 1651 aa35.19■■■■□ 3.22
AC133555.3-203ENST00000549858 BAZ1BQ9UIG0 1483 aaKnown RBP35.19■■■■□ 3.22
AC133555.3-203ENST00000549858 TOP2AP11388 1531 aaKnown RBP34.8■■■■□ 3.16
AC133555.3-203ENST00000549858 SUPT5HO00267 1087 aaKnown RBP34.57■■■■□ 3.12
AC133555.3-203ENST00000549858 NESP48681 1621 aa34.54■■■■□ 3.12
AC133555.3-203ENST00000549858 CCDC88BA6NC98 1476 aa34.44■■■■□ 3.1
AC133555.3-203ENST00000549858 LAMC3Q9Y6N6 1575 aa34.42■■■■□ 3.1
AC133555.3-203ENST00000549858 CADPSQ9ULU8 1353 aa34.42■■■■□ 3.1
AC133555.3-203ENST00000549858 ERCC6Q03468 1493 aa34.27■■■■□ 3.08
AC133555.3-203ENST00000549858 CFTRP13569 1480 aa34.25■■■■□ 3.07
AC133555.3-203ENST00000549858 PDS5BQ9NTI5 1447 aa34.21■■■■□ 3.07
AC133555.3-203ENST00000549858 KIF21AQ7Z4S6 1674 aa34.09■■■■□ 3.05
AC133555.3-203ENST00000549858 FANCD2Q9BXW9 1451 aa34.01■■■■□ 3.04
AC133555.3-203ENST00000549858 PRDM2Q13029 1718 aa33.94■■■■□ 3.02
AC133555.3-203ENST00000549858 CEP164Q9UPV0 1460 aa33.93■■■■□ 3.02
AC133555.3-203ENST00000549858 THOC2Q8NI27 1593 aaKnown RBP33.91■■■■□ 3.02
AC133555.3-203ENST00000549858 MRC2Q9UBG0 1479 aa33.84■■■■□ 3.01
AC133555.3-203ENST00000549858 CUX2O14529 1486 aa33.81■■■■□ 3
AC133555.3-203ENST00000549858 WDR62O43379 1518 aa33.71■■■□□ 2.99
AC133555.3-203ENST00000549858 URB2Q14146 1524 aaKnown RBP33.68■■■□□ 2.98
AC133555.3-203ENST00000549858 TOPBP1Q92547 1522 aa33.5■■■□□ 2.95
AC133555.3-203ENST00000549858 ABCC8Q09428 1581 aa33.47■■■□□ 2.95
AC133555.3-203ENST00000549858 DNMBPQ6XZF7 1577 aa33.46■■■□□ 2.95
AC133555.3-203ENST00000549858 CUX1P39880 1505 aa33.34■■■□□ 2.93
AC133555.3-203ENST00000549858 POLA1P09884 1462 aaPredicted RBP33.23■■■□□ 2.91
AC133555.3-203ENST00000549858 IFT140Q96RY7 1462 aa33.22■■■□□ 2.91
AC133555.3-203ENST00000549858 WRNQ14191 1432 aaPredicted RBP eCLIP33.2■■■□□ 2.91
AC133555.3-203ENST00000549858 FGD5Q6ZNL6 1462 aa33.18■■■□□ 2.9
AC133555.3-203ENST00000549858 RAD54L2Q9Y4B4 1467 aa33.12■■■□□ 2.89
AC133555.3-203ENST00000549858 SOGA1O94964 1423 aa33.12■■■□□ 2.89
AC133555.3-203ENST00000549858 SYNJ1O43426 1573 aa33.12■■■□□ 2.89
AC133555.3-203ENST00000549858 TARBP1Q13395 1621 aaKnown RBP33.1■■■□□ 2.89
AC133555.3-203ENST00000549858 TOP2BQ02880 1626 aa33.09■■■□□ 2.89
AC133555.3-203ENST00000549858 ZNF608Q9ULD9 1512 aaPredicted RBP33.08■■■□□ 2.89
AC133555.3-203ENST00000549858 BIVM-ERCC5R4GMW8 1640 aa33.07■■■□□ 2.88
AC133555.3-203ENST00000549858 AQRO60306 1485 aaKnown RBP eCLIP32.93■■■□□ 2.86
AC133555.3-203ENST00000549858 TDRD9Q8NDG6 1382 aaKnown RBP32.92■■■□□ 2.86
AC133555.3-203ENST00000549858 EIF4G3O43432 1585 aaKnown RBP32.91■■■□□ 2.86
AC133555.3-203ENST00000549858 WDR97A6NE52 1622 aa32.87■■■□□ 2.85
AC133555.3-203ENST00000549858 ABCA10Q8WWZ4 1543 aa32.87■■■□□ 2.85
AC133555.3-203ENST00000549858 GAPVD1Q14C86 1478 aa32.73■■■□□ 2.83
AC133555.3-203ENST00000549858 ABCA5Q8WWZ7 1642 aa32.69■■■□□ 2.82
AC133555.3-203ENST00000549858 GRIN2BQ13224 1484 aa32.67■■■□□ 2.82
AC133555.3-203ENST00000549858 TRIM41Q8WV44 630 aa32.62■■■□□ 2.81
AC133555.3-203ENST00000549858 SNAPC4Q5SXM2 1469 aa32.61■■■□□ 2.81
AC133555.3-203ENST00000549858 PBRM1Q86U86 1689 aa32.6■■■□□ 2.81
AC133555.3-203ENST00000549858 DNAJC5Q9H3Z4 198 aa32.57■■■□□ 2.8
AC133555.3-203ENST00000549858 MAGI1Q96QZ7 1491 aaPredicted RBP32.54■■■□□ 2.8
AC133555.3-203ENST00000549858 OSCARQ8IYS5 282 aa32.51■■■□□ 2.79
AC133555.3-203ENST00000549858 FBLN2P98095 1184 aa32.5■■■□□ 2.79
AC133555.3-203ENST00000549858 KIF27Q86VH2 1401 aa32.49■■■□□ 2.79
AC133555.3-203ENST00000549858 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
AC133555.3-203ENST00000549858 CHD1O14646 1710 aa32.46■■■□□ 2.79
AC133555.3-203ENST00000549858 CHMP7Q8WUX9 453 aaPredicted RBP32.44■■■□□ 2.78
AC133555.3-203ENST00000549858 SYNJ2O15056 1496 aa32.43■■■□□ 2.78
AC133555.3-203ENST00000549858 CHIC1Q5VXU3 224 aa32.41■■■□□ 2.78
AC133555.3-203ENST00000549858 ADAMTS12P58397 1594 aa32.37■■■□□ 2.77
AC133555.3-203ENST00000549858 IGF1RP08069 1367 aa32.37■■■□□ 2.77
AC133555.3-203ENST00000549858 FHAD1B1AJZ9 1412 aa32.34■■■□□ 2.77
AC133555.3-203ENST00000549858 RUSC2Q8N2Y8 1516 aa32.33■■■□□ 2.77
AC133555.3-203ENST00000549858 GRIN2AQ12879 1464 aa32.25■■■□□ 2.75
AC133555.3-203ENST00000549858 CUL7Q14999 1698 aa32.18■■■□□ 2.74
AC133555.3-203ENST00000549858 CARMIL1Q5VZK9 1371 aa32.18■■■□□ 2.74
AC133555.3-203ENST00000549858 CLASP1Q7Z460 1538 aa32.12■■■□□ 2.73
AC133555.3-203ENST00000549858 NUP160Q12769 1436 aa32.11■■■□□ 2.73
AC133555.3-203ENST00000549858 CEP170Q5SW79 1584 aa32.09■■■□□ 2.73
AC133555.3-203ENST00000549858 CSRNP3Q8WYN3 585 aa32■■■□□ 2.71
AC133555.3-203ENST00000549858 EEA1Q15075 1411 aa32■■■□□ 2.71
AC133555.3-203ENST00000549858 RAPGEF2Q9Y4G8 1499 aa31.98■■■□□ 2.71
AC133555.3-203ENST00000549858 FAM9AQ8IZU1 332 aaPredicted RBP31.98■■■□□ 2.71
AC133555.3-203ENST00000549858 ARHGEF11O15085 1522 aa31.95■■■□□ 2.7
AC133555.3-203ENST00000549858 PRXQ9BXM0 1461 aa31.94■■■□□ 2.7
AC133555.3-203ENST00000549858 RIMBP3CA6NJZ7 1639 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms