RNA–Protein interactions for RNA: ENST00000549759.1

PFDN5-207, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-207ENST00000549759 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
PFDN5-207ENST00000549759 MED14O60244 1454 aa18.66■□□□□ 0.58
PFDN5-207ENST00000549759 NUTM2DQ5VT03 806 aaPredicted RBP18.66■□□□□ 0.58
PFDN5-207ENST00000549759 TMEM131LA2VDJ0 1609 aa18.65■□□□□ 0.58
PFDN5-207ENST00000549759 ZFYVE9O95405 1425 aa18.63■□□□□ 0.57
PFDN5-207ENST00000549759 PLEKHG1Q9ULL1 1385 aa18.62■□□□□ 0.57
PFDN5-207ENST00000549759 CLTCL1P53675 1640 aa18.62■□□□□ 0.57
PFDN5-207ENST00000549759 STRCQ7RTU9 1775 aa18.61■□□□□ 0.57
PFDN5-207ENST00000549759 SLC26A8Q96RN1 970 aa18.61■□□□□ 0.57
PFDN5-207ENST00000549759 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
PFDN5-207ENST00000549759 TBX22Q9Y458 520 aa18.6■□□□□ 0.57
PFDN5-207ENST00000549759 SPATA31E1Q6ZUB1 1445 aa18.59■□□□□ 0.57
PFDN5-207ENST00000549759 STAC3Q96MF2 364 aa18.59■□□□□ 0.57
PFDN5-207ENST00000549759 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
PFDN5-207ENST00000549759 NEURL4Q96JN8 1562 aa18.56■□□□□ 0.56
PFDN5-207ENST00000549759 ZNF335Q9H4Z2 1342 aaPredicted RBP18.56■□□□□ 0.56
PFDN5-207ENST00000549759 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
PFDN5-207ENST00000549759 DCAF11Q8TEB1 546 aa18.54■□□□□ 0.56
PFDN5-207ENST00000549759 KCNA6P17658 529 aa18.53■□□□□ 0.56
PFDN5-207ENST00000549759 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
PFDN5-207ENST00000549759 KIF1BO60333 1816 aa18.52■□□□□ 0.56
PFDN5-207ENST00000549759 KDM2AQ9Y2K7 1162 aa18.52■□□□□ 0.56
PFDN5-207ENST00000549759 POLR1AO95602 1720 aaPredicted RBP18.52■□□□□ 0.55
PFDN5-207ENST00000549759 CERKQ8TCT0 537 aa18.51■□□□□ 0.55
PFDN5-207ENST00000549759 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
PFDN5-207ENST00000549759 ADGRF5Q8IZF2 1346 aa18.5■□□□□ 0.55
PFDN5-207ENST00000549759 NEXMIFQ5QGS0 1516 aa18.5■□□□□ 0.55
PFDN5-207ENST00000549759 PIK3R4Q99570 1358 aa18.49■□□□□ 0.55
PFDN5-207ENST00000549759 ADAMTS13Q76LX8 1427 aa18.48■□□□□ 0.55
PFDN5-207ENST00000549759 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
PFDN5-207ENST00000549759 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
PFDN5-207ENST00000549759 AMOTL2Q9Y2J4 779 aa18.46■□□□□ 0.55
PFDN5-207ENST00000549759 PROSER2Q86WR7 435 aaPredicted RBP18.45■□□□□ 0.54
PFDN5-207ENST00000549759 C14orf93Q9H972 538 aaKnown RBP18.45■□□□□ 0.54
PFDN5-207ENST00000549759 MYO5BQ9ULV0 1848 aa18.44■□□□□ 0.54
PFDN5-207ENST00000549759 L3MBTL2Q969R5 705 aa18.44■□□□□ 0.54
PFDN5-207ENST00000549759 CPS1P31327 1500 aa18.44■□□□□ 0.54
PFDN5-207ENST00000549759 SETBP1Q9Y6X0 1596 aa18.43■□□□□ 0.54
PFDN5-207ENST00000549759 METP08581 1390 aa18.42■□□□□ 0.54
PFDN5-207ENST00000549759 DIP2AQ14689 1571 aa18.42■□□□□ 0.54
PFDN5-207ENST00000549759 MYOM2P54296 1465 aa18.42■□□□□ 0.54
PFDN5-207ENST00000549759 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
PFDN5-207ENST00000549759 CFAP70Q5T0N1 1121 aa18.41■□□□□ 0.54
PFDN5-207ENST00000549759 TONSLQ96HA7 1378 aa18.41■□□□□ 0.54
PFDN5-207ENST00000549759 PIK3C2GO75747 1445 aa18.4■□□□□ 0.54
PFDN5-207ENST00000549759 TMEM132EQ6IEE7 984 aa18.38■□□□□ 0.53
PFDN5-207ENST00000549759 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
PFDN5-207ENST00000549759 NRXN1Q9ULB1 1477 aa18.38■□□□□ 0.53
PFDN5-207ENST00000549759 C14orf37Q86TY3 774 aa18.37■□□□□ 0.53
PFDN5-207ENST00000549759 STK26Q9P289 416 aa18.37■□□□□ 0.53
PFDN5-207ENST00000549759 PPLO60437 1756 aa18.36■□□□□ 0.53
PFDN5-207ENST00000549759 TOM1O60784 492 aa18.36■□□□□ 0.53
PFDN5-207ENST00000549759 TMEM94Q12767 1356 aa18.36■□□□□ 0.53
PFDN5-207ENST00000549759 IQSEC2Q5JU85 1478 aa18.36■□□□□ 0.53
PFDN5-207ENST00000549759 ALKQ9UM73 1620 aa18.36■□□□□ 0.53
PFDN5-207ENST00000549759 LRRC7Q96NW7 1537 aa18.35■□□□□ 0.53
PFDN5-207ENST00000549759 NKTRP30414 1462 aaKnown RBP18.35■□□□□ 0.53
PFDN5-207ENST00000549759 PTPRUQ92729 1446 aa18.34■□□□□ 0.53
PFDN5-207ENST00000549759 NCOA3Q9Y6Q9 1424 aa18.34■□□□□ 0.53
PFDN5-207ENST00000549759 RBM33Q96EV2 1170 aaKnown RBP18.34■□□□□ 0.53
PFDN5-207ENST00000549759 UBAP1LF5GYI3 381 aa18.33■□□□□ 0.52
PFDN5-207ENST00000549759 FBXO41Q8TF61 875 aa18.33■□□□□ 0.52
PFDN5-207ENST00000549759 SIRT1Q96EB6 747 aa18.33■□□□□ 0.52
PFDN5-207ENST00000549759 LRPPRCP42704 1394 aaKnown RBP18.32■□□□□ 0.52
PFDN5-207ENST00000549759 ABCC11Q96J66 1382 aa18.32■□□□□ 0.52
PFDN5-207ENST00000549759 NRXN3Q9Y4C0 1643 aa18.32■□□□□ 0.52
PFDN5-207ENST00000549759 C19orf44Q9H6X5 657 aa18.32■□□□□ 0.52
PFDN5-207ENST00000549759 PRAG1Q86YV5 1406 aa18.3■□□□□ 0.52
PFDN5-207ENST00000549759 NWD1Q149M9 1564 aa18.3■□□□□ 0.52
PFDN5-207ENST00000549759 MSH6P52701 1360 aa18.3■□□□□ 0.52
PFDN5-207ENST00000549759 ATF3P18847 181 aa18.29■□□□□ 0.52
PFDN5-207ENST00000549759 YTHDC2Q9H6S0 1430 aaKnown RBP18.29■□□□□ 0.52
PFDN5-207ENST00000549759 IFT172Q9UG01 1749 aa18.29■□□□□ 0.52
PFDN5-207ENST00000549759 CADPS2Q86UW7 1296 aa18.28■□□□□ 0.52
PFDN5-207ENST00000549759 PTCH1Q13635 1447 aa18.27■□□□□ 0.52
PFDN5-207ENST00000549759 POGKQ9P215 609 aa18.27■□□□□ 0.52
PFDN5-207ENST00000549759 TRAK1Q9UPV9 953 aa18.27■□□□□ 0.52
PFDN5-207ENST00000549759 ROBO2Q9HCK4 1378 aa18.27■□□□□ 0.51
PFDN5-207ENST00000549759 NBPF1Q3BBV0 1214 aa18.26■□□□□ 0.51
PFDN5-207ENST00000549759 WAPLQ7Z5K2 1190 aa18.25■□□□□ 0.51
PFDN5-207ENST00000549759 CHD2O14647 1828 aaKnown RBP18.25■□□□□ 0.51
PFDN5-207ENST00000549759 TECPR2O15040 1411 aa18.24■□□□□ 0.51
PFDN5-207ENST00000549759 PRAM1Q96QH2 718 aa18.24■□□□□ 0.51
PFDN5-207ENST00000549759 LAMC1P11047 1609 aa18.23■□□□□ 0.51
PFDN5-207ENST00000549759 PIP4K2BP78356 416 aa18.23■□□□□ 0.51
PFDN5-207ENST00000549759 NBPF8Q3BBV2 869 aa18.23■□□□□ 0.51
PFDN5-207ENST00000549759 SLAIN2Q9P270 581 aa18.23■□□□□ 0.51
PFDN5-207ENST00000549759 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
PFDN5-207ENST00000549759 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
PFDN5-207ENST00000549759 STRCP1A6NGW2 1772 aa18.22■□□□□ 0.51
PFDN5-207ENST00000549759 ROCK2O75116 1388 aaKnown RBP18.22■□□□□ 0.51
PFDN5-207ENST00000549759 ADGRB1O14514 1584 aa18.2■□□□□ 0.5
PFDN5-207ENST00000549759 XRN1Q8IZH2 1706 aaKnown RBP18.2■□□□□ 0.5
PFDN5-207ENST00000549759 SAFB2Q14151 953 aaKnown RBP eCLIP18.19■□□□□ 0.5
PFDN5-207ENST00000549759 CARD11Q9BXL7 1154 aa18.19■□□□□ 0.5
PFDN5-207ENST00000549759 ASXL1Q8IXJ9 1541 aa18.18■□□□□ 0.5
PFDN5-207ENST00000549759 SETD1AO15047 1707 aaKnown RBP18.18■□□□□ 0.5
PFDN5-207ENST00000549759 ADGRL3Q9HAR2 1447 aa18.18■□□□□ 0.5
PFDN5-207ENST00000549759 ILDR1Q86SU0 546 aaPredicted RBP18.18■□□□□ 0.5
PFDN5-207ENST00000549759 DCCP43146 1447 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms