RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 NPHP4O75161 1426 aaPredicted RBP25.44■■□□□ 1.66
HDAC7-227ENST00000548080 RIMS2Q9UQ26 1411 aa25.44■■□□□ 1.66
HDAC7-227ENST00000548080 IQGAP1P46940 1657 aa25.42■■□□□ 1.66
HDAC7-227ENST00000548080 EID1Q9Y6B2 187 aa25.42■■□□□ 1.66
HDAC7-227ENST00000548080 ZFYVE9O95405 1425 aa25.41■■□□□ 1.66
HDAC7-227ENST00000548080 ZNF326Q5BKZ1 582 aaKnown RBP25.41■■□□□ 1.66
HDAC7-227ENST00000548080 CCDC144AA2RUR9 1427 aa25.41■■□□□ 1.66
HDAC7-227ENST00000548080 MED14O60244 1454 aa25.4■■□□□ 1.66
HDAC7-227ENST00000548080 CLSPNQ9HAW4 1339 aa25.39■■□□□ 1.65
HDAC7-227ENST00000548080 PPP1R15AO75807 674 aaPredicted RBP25.36■■□□□ 1.65
HDAC7-227ENST00000548080 ANKRD30BQ9BXX2 1392 aa25.35■■□□□ 1.65
HDAC7-227ENST00000548080 ZNF335Q9H4Z2 1342 aaPredicted RBP25.34■■□□□ 1.65
HDAC7-227ENST00000548080 BCANQ96GW7 911 aa25.34■■□□□ 1.65
HDAC7-227ENST00000548080 RGL3Q3MIN7 710 aa25.33■■□□□ 1.65
HDAC7-227ENST00000548080 NEXMIFQ5QGS0 1516 aa25.32■■□□□ 1.64
HDAC7-227ENST00000548080 SLC26A8Q96RN1 970 aa25.31■■□□□ 1.64
HDAC7-227ENST00000548080 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.29■■□□□ 1.64
HDAC7-227ENST00000548080 SPATA31E1Q6ZUB1 1445 aa25.28■■□□□ 1.64
HDAC7-227ENST00000548080 PLEKHG1Q9ULL1 1385 aa25.28■■□□□ 1.64
HDAC7-227ENST00000548080 HDGFP51858 240 aaKnown RBP25.28■■□□□ 1.64
HDAC7-227ENST00000548080 PPLO60437 1756 aa25.26■■□□□ 1.64
HDAC7-227ENST00000548080 LTBP4Q8N2S1 1624 aa25.26■■□□□ 1.63
HDAC7-227ENST00000548080 STRCP1A6NGW2 1772 aa25.25■■□□□ 1.63
HDAC7-227ENST00000548080 IFT172Q9UG01 1749 aa25.22■■□□□ 1.63
HDAC7-227ENST00000548080 NRXN3Q9Y4C0 1643 aa25.22■■□□□ 1.63
HDAC7-227ENST00000548080 ADAMTS13Q76LX8 1427 aa25.2■■□□□ 1.62
HDAC7-227ENST00000548080 RPGRIP1LQ68CZ1 1315 aa25.19■■□□□ 1.62
HDAC7-227ENST00000548080 CERKQ8TCT0 537 aa25.17■■□□□ 1.62
HDAC7-227ENST00000548080 ADGRF5Q8IZF2 1346 aa25.17■■□□□ 1.62
HDAC7-227ENST00000548080 SETBP1Q9Y6X0 1596 aa25.16■■□□□ 1.62
HDAC7-227ENST00000548080 SIN3AQ96ST3 1273 aa25.16■■□□□ 1.62
HDAC7-227ENST00000548080 VGFO15240 615 aaPredicted RBP25.15■■□□□ 1.62
HDAC7-227ENST00000548080 DIP2AQ14689 1571 aa25.13■■□□□ 1.61
HDAC7-227ENST00000548080 TBX22Q9Y458 520 aa25.12■■□□□ 1.61
HDAC7-227ENST00000548080 NEUROD1Q13562 356 aa25.11■■□□□ 1.61
HDAC7-227ENST00000548080 KDM2AQ9Y2K7 1162 aa25.11■■□□□ 1.61
HDAC7-227ENST00000548080 CHD2O14647 1828 aaKnown RBP25.11■■□□□ 1.61
HDAC7-227ENST00000548080 CPS1P31327 1500 aa25.1■■□□□ 1.61
HDAC7-227ENST00000548080 SETD1AO15047 1707 aaKnown RBP25.09■■□□□ 1.61
HDAC7-227ENST00000548080 METP08581 1390 aa25.09■■□□□ 1.61
HDAC7-227ENST00000548080 ALKQ9UM73 1620 aa25.09■■□□□ 1.61
HDAC7-227ENST00000548080 KCNA6P17658 529 aa25.09■■□□□ 1.61
HDAC7-227ENST00000548080 RBM33Q96EV2 1170 aaKnown RBP25.09■■□□□ 1.61
HDAC7-227ENST00000548080 PTPRUQ92729 1446 aa25.08■■□□□ 1.61
HDAC7-227ENST00000548080 NWD1Q149M9 1564 aa25.08■■□□□ 1.61
HDAC7-227ENST00000548080 DCAF11Q8TEB1 546 aa25.08■■□□□ 1.6
HDAC7-227ENST00000548080 LRRC7Q96NW7 1537 aa25.07■■□□□ 1.6
HDAC7-227ENST00000548080 MYOM2P54296 1465 aa25.05■■□□□ 1.6
HDAC7-227ENST00000548080 XIRP1Q702N8 1843 aaKnown RBP25.04■■□□□ 1.6
HDAC7-227ENST00000548080 PIK3C2GO75747 1445 aa25.04■■□□□ 1.6
HDAC7-227ENST00000548080 AMOTL2Q9Y2J4 779 aa25.02■■□□□ 1.6
HDAC7-227ENST00000548080 NRXN1Q9ULB1 1477 aa25.02■■□□□ 1.6
HDAC7-227ENST00000548080 PROSER2Q86WR7 435 aaPredicted RBP25.02■■□□□ 1.6
HDAC7-227ENST00000548080 XRN1Q8IZH2 1706 aaKnown RBP25■■□□□ 1.59
HDAC7-227ENST00000548080 PIK3R4Q99570 1358 aa25■■□□□ 1.59
HDAC7-227ENST00000548080 TIMELESSQ9UNS1 1208 aa25■■□□□ 1.59
HDAC7-227ENST00000548080 NKTRP30414 1462 aaKnown RBP24.99■■□□□ 1.59
HDAC7-227ENST00000548080 TMEM94Q12767 1356 aa24.99■■□□□ 1.59
HDAC7-227ENST00000548080 ASXL1Q8IXJ9 1541 aa24.98■■□□□ 1.59
HDAC7-227ENST00000548080 CFAP70Q5T0N1 1121 aa24.98■■□□□ 1.59
HDAC7-227ENST00000548080 TMEM132EQ6IEE7 984 aa24.98■■□□□ 1.59
HDAC7-227ENST00000548080 L3MBTL2Q969R5 705 aa24.96■■□□□ 1.59
HDAC7-227ENST00000548080 IQSEC2Q5JU85 1478 aa24.96■■□□□ 1.59
HDAC7-227ENST00000548080 STK26Q9P289 416 aa24.94■■□□□ 1.58
HDAC7-227ENST00000548080 C14orf93Q9H972 538 aaKnown RBP24.93■■□□□ 1.58
HDAC7-227ENST00000548080 UBAP1LF5GYI3 381 aa24.92■■□□□ 1.58
HDAC7-227ENST00000548080 LAMC1P11047 1609 aa24.92■■□□□ 1.58
HDAC7-227ENST00000548080 FBXO41Q8TF61 875 aa24.91■■□□□ 1.58
HDAC7-227ENST00000548080 TONSLQ96HA7 1378 aa24.9■■□□□ 1.58
HDAC7-227ENST00000548080 ROBO2Q9HCK4 1378 aa24.89■■□□□ 1.57
HDAC7-227ENST00000548080 ILDR1Q86SU0 546 aaPredicted RBP24.89■■□□□ 1.57
HDAC7-227ENST00000548080 C14orf37Q86TY3 774 aa24.89■■□□□ 1.57
HDAC7-227ENST00000548080 PRAG1Q86YV5 1406 aa24.87■■□□□ 1.57
HDAC7-227ENST00000548080 YTHDC2Q9H6S0 1430 aaKnown RBP24.87■■□□□ 1.57
HDAC7-227ENST00000548080 LRPPRCP42704 1394 aaKnown RBP24.86■■□□□ 1.57
HDAC7-227ENST00000548080 STAC3Q96MF2 364 aa24.85■■□□□ 1.57
HDAC7-227ENST00000548080 ADGRB1O14514 1584 aa24.85■■□□□ 1.57
HDAC7-227ENST00000548080 SCAF1Q9H7N4 1312 aaKnown RBP24.85■■□□□ 1.57
HDAC7-227ENST00000548080 PIP4K2BP78356 416 aa24.84■■□□□ 1.57
HDAC7-227ENST00000548080 PTCH1Q13635 1447 aa24.83■■□□□ 1.57
HDAC7-227ENST00000548080 KNDC1Q76NI1 1749 aa24.83■■□□□ 1.57
HDAC7-227ENST00000548080 MSH6P52701 1360 aa24.82■■□□□ 1.56
HDAC7-227ENST00000548080 NALCNQ8IZF0 1738 aa24.82■■□□□ 1.56
HDAC7-227ENST00000548080 WAPLQ7Z5K2 1190 aa24.82■■□□□ 1.56
HDAC7-227ENST00000548080 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.82■■□□□ 1.56
HDAC7-227ENST00000548080 NBPF1Q3BBV0 1214 aa24.81■■□□□ 1.56
HDAC7-227ENST00000548080 PLEKHH1Q9ULM0 1364 aa24.81■■□□□ 1.56
HDAC7-227ENST00000548080 TOM1O60784 492 aa24.8■■□□□ 1.56
HDAC7-227ENST00000548080 ABCC11Q96J66 1382 aa24.79■■□□□ 1.56
HDAC7-227ENST00000548080 TECPR2O15040 1411 aa24.79■■□□□ 1.56
HDAC7-227ENST00000548080 KIAA1210Q9ULL0 1709 aa24.78■■□□□ 1.56
HDAC7-227ENST00000548080 NBPF8Q3BBV2 869 aa24.78■■□□□ 1.56
HDAC7-227ENST00000548080 TRAK1Q9UPV9 953 aa24.78■■□□□ 1.56
HDAC7-227ENST00000548080 SAFB2Q14151 953 aaKnown RBP eCLIP24.77■■□□□ 1.56
HDAC7-227ENST00000548080 NCOA3Q9Y6Q9 1424 aa24.76■■□□□ 1.55
HDAC7-227ENST00000548080 TRPM1Q7Z4N2 1603 aa24.76■■□□□ 1.55
HDAC7-227ENST00000548080 ADGRL3Q9HAR2 1447 aa24.76■■□□□ 1.55
HDAC7-227ENST00000548080 C19orf44Q9H6X5 657 aa24.75■■□□□ 1.55
HDAC7-227ENST00000548080 PRAM1Q96QH2 718 aa24.73■■□□□ 1.55
HDAC7-227ENST00000548080 ATF3P18847 181 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms