RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, humanhuman

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-213ENST00000546120 SLFN5Q08AF3 891 aa12.88□□□□□ -0.35
UBC-213ENST00000546120 WDR43Q15061 677 aaKnown RBP eCLIP12.88□□□□□ -0.35
UBC-213ENST00000546120 CFAP44Q96MT7 982 aa12.88□□□□□ -0.35
UBC-213ENST00000546120 NKTRP30414 1462 aaKnown RBP12.88□□□□□ -0.35
UBC-213ENST00000546120 ADGBQ8N7X0 1667 aa12.88□□□□□ -0.35
UBC-213ENST00000546120 SYNJ2O15056 1496 aa12.87□□□□□ -0.35
UBC-213ENST00000546120 ST20-MTHFSA0A0A6YYL1 179 aa12.87□□□□□ -0.35
UBC-213ENST00000546120 ZSCAN30Q86W11 494 aa12.87□□□□□ -0.35
UBC-213ENST00000546120 PPP1R9BQ96SB3 815 aa12.87□□□□□ -0.35
UBC-213ENST00000546120 MAGI3Q5TCQ9 1506 aa12.87□□□□□ -0.35
UBC-213ENST00000546120 PIK3C2GO75747 1445 aa12.87□□□□□ -0.35
UBC-213ENST00000546120 LRRIQ1Q96JM4 1722 aa12.86□□□□□ -0.35
UBC-213ENST00000546120 GOLGA6L22H0YM25 854 aa12.86□□□□□ -0.35
UBC-213ENST00000546120 TNNT2P45379 298 aaPredicted RBP12.86□□□□□ -0.35
UBC-213ENST00000546120 UTP14CQ5TAP6 766 aaKnown RBP12.86□□□□□ -0.35
UBC-213ENST00000546120 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
UBC-213ENST00000546120 CDCA7LQ96GN5 454 aa12.86□□□□□ -0.35
UBC-213ENST00000546120 COL17A1Q9UMD9 1497 aaPredicted RBP12.85□□□□□ -0.35
UBC-213ENST00000546120 TMF1P82094 1093 aa12.85□□□□□ -0.35
UBC-213ENST00000546120 SNX21Q969T3 373 aa12.85□□□□□ -0.35
UBC-213ENST00000546120 POLR3GLQ9BT43 218 aa12.85□□□□□ -0.35
UBC-213ENST00000546120 RWDD1Q9H446 243 aaPredicted RBP12.85□□□□□ -0.35
UBC-213ENST00000546120 PLXNC1O60486 1568 aa12.85□□□□□ -0.35
UBC-213ENST00000546120 PLIN1O60240 522 aa12.84□□□□□ -0.35
UBC-213ENST00000546120 PKD2Q13563 968 aa12.84□□□□□ -0.35
UBC-213ENST00000546120 CYB5RLQ6IPT4 315 aa12.84□□□□□ -0.35
UBC-213ENST00000546120 CLUAP1Q96AJ1 413 aa12.84□□□□□ -0.35
UBC-213ENST00000546120 PTPRGP23470 1445 aa12.84□□□□□ -0.35
UBC-213ENST00000546120 EIF2AK4Q9P2K8 1649 aaKnown RBP12.84□□□□□ -0.35
UBC-213ENST00000546120 ABCC2Q92887 1545 aa12.83□□□□□ -0.35
UBC-213ENST00000546120 DYNC1I1O14576 645 aa12.83□□□□□ -0.36
UBC-213ENST00000546120 MSNP26038 577 aaKnown RBP12.83□□□□□ -0.36
UBC-213ENST00000546120 TAF3Q5VWG9 929 aa12.83□□□□□ -0.36
UBC-213ENST00000546120 CLEC17AQ6ZS10 378 aa12.83□□□□□ -0.36
UBC-213ENST00000546120 TBC1D2Q9BYX2 928 aa12.83□□□□□ -0.36
UBC-213ENST00000546120 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.36
UBC-213ENST00000546120 CT47B1P0C2W7 299 aaPredicted RBP12.82□□□□□ -0.36
UBC-213ENST00000546120 RGS3P49796 1198 aa12.82□□□□□ -0.36
UBC-213ENST00000546120 RSPH4AQ5TD94 716 aa12.82□□□□□ -0.36
UBC-213ENST00000546120 HSCBQ8IWL3 235 aa12.82□□□□□ -0.36
UBC-213ENST00000546120 ANKRD50Q9ULJ7 1429 aa12.81□□□□□ -0.36
UBC-213ENST00000546120 NLRP1Q9C000 1473 aa12.81□□□□□ -0.36
UBC-213ENST00000546120 ZNF500O60304 480 aaPredicted RBP12.81□□□□□ -0.36
UBC-213ENST00000546120 FOXD1Q16676 465 aa12.81□□□□□ -0.36
UBC-213ENST00000546120 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
UBC-213ENST00000546120 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
UBC-213ENST00000546120 ARHGAP31Q2M1Z3 1444 aa12.8□□□□□ -0.36
UBC-213ENST00000546120 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
UBC-213ENST00000546120 PRAG1Q86YV5 1406 aa12.79□□□□□ -0.36
UBC-213ENST00000546120 NCOA3Q9Y6Q9 1424 aa12.79□□□□□ -0.36
UBC-213ENST00000546120 KIAA1211Q6ZU35 1233 aa12.78□□□□□ -0.36
UBC-213ENST00000546120 SLKQ9H2G2 1235 aaPredicted RBP12.78□□□□□ -0.36
UBC-213ENST00000546120 ADAMTS12P58397 1594 aa12.77□□□□□ -0.36
UBC-213ENST00000546120 C20orf194Q5TEA3 1177 aa12.77□□□□□ -0.37
UBC-213ENST00000546120 GTPBP4Q9BZE4 634 aaKnown RBP12.77□□□□□ -0.37
UBC-213ENST00000546120 ADAMTS8Q9UP79 889 aa12.77□□□□□ -0.37
UBC-213ENST00000546120 KNSTRNQ9Y448 316 aa12.77□□□□□ -0.37
UBC-213ENST00000546120 GRIN2AQ12879 1464 aa12.77□□□□□ -0.37
UBC-213ENST00000546120 PRDM15P57071 1507 aaPredicted RBP12.77□□□□□ -0.37
UBC-213ENST00000546120 IQGAP2Q13576 1575 aa12.77□□□□□ -0.37
UBC-213ENST00000546120 KIF20AO95235 890 aa12.76□□□□□ -0.37
UBC-213ENST00000546120 RBM25P49756 843 aaKnown RBP12.76□□□□□ -0.37
UBC-213ENST00000546120 C22orf23Q9BZE7 217 aa12.76□□□□□ -0.37
UBC-213ENST00000546120 CHMP4BQ9H444 224 aaKnown RBP12.76□□□□□ -0.37
UBC-213ENST00000546120 PRDM4Q9UKN5 801 aa12.76□□□□□ -0.37
UBC-213ENST00000546120 TROQ12816 1431 aaPredicted RBP12.76□□□□□ -0.37
UBC-213ENST00000546120 ERBINQ96RT1 1412 aa12.76□□□□□ -0.37
UBC-213ENST00000546120 DDIT3P35638 169 aa12.75□□□□□ -0.37
UBC-213ENST00000546120 HMGN5P82970 282 aaKnown RBP12.75□□□□□ -0.37
UBC-213ENST00000546120 KANK1Q14678 1352 aa12.75□□□□□ -0.37
UBC-213ENST00000546120 KIAA0586Q9BVV6 1533 aa12.75□□□□□ -0.37
UBC-213ENST00000546120 YEATS2Q9ULM3 1422 aa12.75□□□□□ -0.37
UBC-213ENST00000546120 NOL7Q9UMY1 257 aaKnown RBP12.75□□□□□ -0.37
UBC-213ENST00000546120 ABCC10Q5T3U5 1492 aa12.74□□□□□ -0.37
UBC-213ENST00000546120 CCDC141Q6ZP82 1450 aa12.74□□□□□ -0.37
UBC-213ENST00000546120 NUP155O75694 1391 aa12.74□□□□□ -0.37
UBC-213ENST00000546120 ZNF326Q5BKZ1 582 aaKnown RBP12.74□□□□□ -0.37
UBC-213ENST00000546120 PANK3Q9H999 370 aa12.74□□□□□ -0.37
UBC-213ENST00000546120 CFDP1Q9UEE9 299 aaPredicted RBP12.74□□□□□ -0.37
UBC-213ENST00000546120 CROCC2H7BZ55 1655 aa12.73□□□□□ -0.37
UBC-213ENST00000546120 TRPM1Q7Z4N2 1603 aa12.73□□□□□ -0.37
UBC-213ENST00000546120 PPP2R1AP30153 589 aa12.73□□□□□ -0.37
UBC-213ENST00000546120 KLHL40Q2TBA0 621 aa12.73□□□□□ -0.37
UBC-213ENST00000546120 ATP10AO60312 1499 aa12.72□□□□□ -0.37
UBC-213ENST00000546120 PLEKHH1Q9ULM0 1364 aa12.72□□□□□ -0.37
UBC-213ENST00000546120 CANXP27824 592 aaKnown RBP12.72□□□□□ -0.37
UBC-213ENST00000546120 NASPP49321 788 aaPredicted RBP12.72□□□□□ -0.37
UBC-213ENST00000546120 ZNF445P59923 1031 aa12.72□□□□□ -0.37
UBC-213ENST00000546120 RAB3GAP1Q15042 981 aa12.72□□□□□ -0.37
UBC-213ENST00000546120 WDR63Q8IWG1 891 aa12.72□□□□□ -0.37
UBC-213ENST00000546120 TESK2Q96S53 571 aa12.72□□□□□ -0.37
UBC-213ENST00000546120 ADCY10Q96PN6 1610 aa12.72□□□□□ -0.37
UBC-213ENST00000546120 PANK2Q9BZ23 570 aa12.71□□□□□ -0.37
UBC-213ENST00000546120 IGHDP01880 384 aa12.7□□□□□ -0.38
UBC-213ENST00000546120 TSPY4P0CV99 314 aa12.7□□□□□ -0.38
UBC-213ENST00000546120 TSPY10P0CW01 314 aa12.7□□□□□ -0.38
UBC-213ENST00000546120 HDAC1Q13547 482 aaPredicted RBP12.7□□□□□ -0.38
UBC-213ENST00000546120 CCDC27Q2M243 656 aa12.7□□□□□ -0.38
UBC-213ENST00000546120 SASS6Q6UVJ0 657 aa12.7□□□□□ -0.38
UBC-213ENST00000546120 PRIMPOLQ96LW4 560 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms