RNA–Protein interactions for RNA: ENST00000545825.1

CCDC189-211, Transcript of coiled-coil domain containing 189, human

TSL 1 (best) BASIC

Gene CCDC189, Length 1,046 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC189-211	ENST00000545825	IQSEC2	Q5JU85	1478 aa		33.53	■■■□□ 2.96
CCDC189-211	ENST00000545825	MPHOSPH9	Q99550	1183 aa		33.53	■■■□□ 2.96
CCDC189-211	ENST00000545825	CPS1	P31327	1500 aa		33.51	■■■□□ 2.95
CCDC189-211	ENST00000545825	HDGF	P51858	240 aa	Known RBP	33.5	■■■□□ 2.95
CCDC189-211	ENST00000545825	FOXD1	Q16676	465 aa		33.49	■■■□□ 2.95
CCDC189-211	ENST00000545825	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.47	■■■□□ 2.95
CCDC189-211	ENST00000545825	PLEKHG1	Q9ULL1	1385 aa		33.47	■■■□□ 2.95
CCDC189-211	ENST00000545825	PPP1R15A	O75807	674 aa	Predicted RBP	33.46	■■■□□ 2.95
CCDC189-211	ENST00000545825	STRCP1	A6NGW2	1772 aa		33.46	■■■□□ 2.95
CCDC189-211	ENST00000545825	SLC26A8	Q96RN1	970 aa		33.44	■■■□□ 2.94
CCDC189-211	ENST00000545825	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.43	■■■□□ 2.94
CCDC189-211	ENST00000545825	KIF1B	O60333	1816 aa		33.4	■■■□□ 2.94
CCDC189-211	ENST00000545825	BCAN	Q96GW7	911 aa		33.4	■■■□□ 2.94
CCDC189-211	ENST00000545825	SENP3	Q9H4L4	574 aa	Predicted RBP	33.4	■■■□□ 2.94
CCDC189-211	ENST00000545825	ZNF326	Q5BKZ1	582 aa	Known RBP	33.39	■■■□□ 2.94
CCDC189-211	ENST00000545825	HRC	P23327	699 aa		33.37	■■■□□ 2.93
CCDC189-211	ENST00000545825	LRRC7	Q96NW7	1537 aa		33.36	■■■□□ 2.93
CCDC189-211	ENST00000545825	NEXMIF	Q5QGS0	1516 aa		33.34	■■■□□ 2.93
CCDC189-211	ENST00000545825	CCDC144A	A2RUR9	1427 aa		33.34	■■■□□ 2.93
CCDC189-211	ENST00000545825	ADAMTS13	Q76LX8	1427 aa		33.34	■■■□□ 2.93
CCDC189-211	ENST00000545825	KCNA6	P17658	529 aa		33.31	■■■□□ 2.92
CCDC189-211	ENST00000545825	TBX22	Q9Y458	520 aa		33.31	■■■□□ 2.92
CCDC189-211	ENST00000545825	NWD1	Q149M9	1564 aa		33.29	■■■□□ 2.92
CCDC189-211	ENST00000545825	DIP2A	Q14689	1571 aa		33.28	■■■□□ 2.92
CCDC189-211	ENST00000545825	SETBP1	Q9Y6X0	1596 aa		33.26	■■■□□ 2.92
CCDC189-211	ENST00000545825	UBAP1L	F5GYI3	381 aa		33.26	■■■□□ 2.91
CCDC189-211	ENST00000545825	NRXN3	Q9Y4C0	1643 aa		33.26	■■■□□ 2.91
CCDC189-211	ENST00000545825	SPATA31E1	Q6ZUB1	1445 aa		33.24	■■■□□ 2.91
CCDC189-211	ENST00000545825	RPGRIP1L	Q68CZ1	1315 aa		33.24	■■■□□ 2.91
CCDC189-211	ENST00000545825	NKTR	P30414	1462 aa	Known RBP	33.22	■■■□□ 2.91
CCDC189-211	ENST00000545825	CHD2	O14647	1828 aa	Known RBP	33.21	■■■□□ 2.91
CCDC189-211	ENST00000545825	PIK3R4	Q99570	1358 aa		33.2	■■■□□ 2.9
CCDC189-211	ENST00000545825	XIRP1	Q702N8	1843 aa	Known RBP	33.19	■■■□□ 2.9
CCDC189-211	ENST00000545825	VGF	O15240	615 aa	Predicted RBP	33.18	■■■□□ 2.9
CCDC189-211	ENST00000545825	PPL	O60437	1756 aa		33.18	■■■□□ 2.9
CCDC189-211	ENST00000545825	TMEM94	Q12767	1356 aa		33.17	■■■□□ 2.9
CCDC189-211	ENST00000545825	ANKRD30B	Q9BXX2	1392 aa		33.16	■■■□□ 2.9
CCDC189-211	ENST00000545825	ALK	Q9UM73	1620 aa		33.16	■■■□□ 2.9
CCDC189-211	ENST00000545825	TOM1	O60784	492 aa		33.15	■■■□□ 2.9
CCDC189-211	ENST00000545825	RGL3	Q3MIN7	710 aa		33.15	■■■□□ 2.9
CCDC189-211	ENST00000545825	PROSER2	Q86WR7	435 aa	Predicted RBP	33.15	■■■□□ 2.9
CCDC189-211	ENST00000545825	PTPRU	Q92729	1446 aa		33.12	■■■□□ 2.89
CCDC189-211	ENST00000545825	RBM33	Q96EV2	1170 aa	Known RBP	33.11	■■■□□ 2.89
CCDC189-211	ENST00000545825	MET	P08581	1390 aa		33.1	■■■□□ 2.89
CCDC189-211	ENST00000545825	IFT172	Q9UG01	1749 aa		33.09	■■■□□ 2.89
CCDC189-211	ENST00000545825	AMOTL2	Q9Y2J4	779 aa		33.07	■■■□□ 2.88
CCDC189-211	ENST00000545825	XRN1	Q8IZH2	1706 aa	Known RBP	33.05	■■■□□ 2.88
CCDC189-211	ENST00000545825	PIP4K2B	P78356	416 aa		33.05	■■■□□ 2.88
CCDC189-211	ENST00000545825	SETD1A	O15047	1707 aa	Known RBP	33.05	■■■□□ 2.88
CCDC189-211	ENST00000545825	ADGRF5	Q8IZF2	1346 aa		33.04	■■■□□ 2.88
CCDC189-211	ENST00000545825	SCAF1	Q9H7N4	1312 aa	Known RBP	33.02	■■■□□ 2.88
CCDC189-211	ENST00000545825	NCOA3	Q9Y6Q9	1424 aa		33	■■■□□ 2.87
CCDC189-211	ENST00000545825	TRIM26	Q12899	539 aa	Predicted RBP	32.99	■■■□□ 2.87
CCDC189-211	ENST00000545825	MSH6	P52701	1360 aa		32.97	■■■□□ 2.87
CCDC189-211	ENST00000545825	PIK3C2G	O75747	1445 aa		32.95	■■■□□ 2.87
CCDC189-211	ENST00000545825	MYOM2	P54296	1465 aa		32.94	■■■□□ 2.86
CCDC189-211	ENST00000545825	NRXN1	Q9ULB1	1477 aa		32.92	■■■□□ 2.86
CCDC189-211	ENST00000545825	C14orf37	Q86TY3	774 aa		32.9	■■■□□ 2.86
CCDC189-211	ENST00000545825	PRAG1	Q86YV5	1406 aa		32.88	■■■□□ 2.85
CCDC189-211	ENST00000545825	HSPA1L	P34931	641 aa		32.88	■■■□□ 2.85
CCDC189-211	ENST00000545825	C19orf44	Q9H6X5	657 aa		32.87	■■■□□ 2.85
CCDC189-211	ENST00000545825	PTCH1	Q13635	1447 aa		32.86	■■■□□ 2.85
CCDC189-211	ENST00000545825	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.85	■■■□□ 2.85
CCDC189-211	ENST00000545825	ASXL1	Q8IXJ9	1541 aa		32.85	■■■□□ 2.85
CCDC189-211	ENST00000545825	ROBO2	Q9HCK4	1378 aa		32.84	■■■□□ 2.85
CCDC189-211	ENST00000545825	FAM135B	Q49AJ0	1406 aa		32.84	■■■□□ 2.85
CCDC189-211	ENST00000545825	C14orf93	Q9H972	538 aa	Known RBP	32.82	■■■□□ 2.84
CCDC189-211	ENST00000545825	DHX57	Q6P158	1386 aa	Known RBP	32.82	■■■□□ 2.84
CCDC189-211	ENST00000545825	SLAIN2	Q9P270	581 aa		32.81	■■■□□ 2.84
CCDC189-211	ENST00000545825	CADPS2	Q86UW7	1296 aa		32.8	■■■□□ 2.84
CCDC189-211	ENST00000545825	DCAF11	Q8TEB1	546 aa		32.8	■■■□□ 2.84
CCDC189-211	ENST00000545825	ADGRL3	Q9HAR2	1447 aa		32.79	■■■□□ 2.84
CCDC189-211	ENST00000545825	TMEM132E	Q6IEE7	984 aa		32.79	■■■□□ 2.84
CCDC189-211	ENST00000545825	DCC	P43146	1447 aa		32.78	■■■□□ 2.84
CCDC189-211	ENST00000545825	LAMC1	P11047	1609 aa		32.78	■■■□□ 2.84
CCDC189-211	ENST00000545825	ATF3	P18847	181 aa		32.78	■■■□□ 2.84
CCDC189-211	ENST00000545825	CFAP70	Q5T0N1	1121 aa		32.78	■■■□□ 2.84
CCDC189-211	ENST00000545825	LRPPRC	P42704	1394 aa	Known RBP	32.78	■■■□□ 2.84
CCDC189-211	ENST00000545825	ROBO1	Q9Y6N7	1651 aa		32.78	■■■□□ 2.84
CCDC189-211	ENST00000545825	KDM2A	Q9Y2K7	1162 aa		32.77	■■■□□ 2.84
CCDC189-211	ENST00000545825	NALCN	Q8IZF0	1738 aa		32.77	■■■□□ 2.84
CCDC189-211	ENST00000545825	TECPR2	O15040	1411 aa		32.77	■■■□□ 2.84
CCDC189-211	ENST00000545825	STAC3	Q96MF2	364 aa		32.76	■■■□□ 2.83
CCDC189-211	ENST00000545825	ABCC11	Q96J66	1382 aa		32.74	■■■□□ 2.83
CCDC189-211	ENST00000545825	STK26	Q9P289	416 aa		32.74	■■■□□ 2.83
CCDC189-211	ENST00000545825	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.73	■■■□□ 2.83
CCDC189-211	ENST00000545825	KNDC1	Q76NI1	1749 aa		32.71	■■■□□ 2.83
CCDC189-211	ENST00000545825	MST1R	Q04912	1400 aa		32.68	■■■□□ 2.82
CCDC189-211	ENST00000545825	ADGRB1	O14514	1584 aa		32.66	■■■□□ 2.82
CCDC189-211	ENST00000545825	SIN3A	Q96ST3	1273 aa		32.66	■■■□□ 2.82
CCDC189-211	ENST00000545825	WAPL	Q7Z5K2	1190 aa		32.64	■■■□□ 2.82
CCDC189-211	ENST00000545825	PLEKHH1	Q9ULM0	1364 aa		32.63	■■■□□ 2.81
CCDC189-211	ENST00000545825	SIRT1	Q96EB6	747 aa		32.61	■■■□□ 2.81
CCDC189-211	ENST00000545825	BRINP3	Q76B58	766 aa		32.59	■■■□□ 2.81
CCDC189-211	ENST00000545825	NEUROD1	Q13562	356 aa		32.57	■■■□□ 2.8
CCDC189-211	ENST00000545825	CDC42BPG	Q6DT37	1551 aa		32.57	■■■□□ 2.8
CCDC189-211	ENST00000545825	DLC1	Q96QB1	1528 aa		32.56	■■■□□ 2.8
CCDC189-211	ENST00000545825	L3MBTL2	Q969R5	705 aa		32.56	■■■□□ 2.8
CCDC189-211	ENST00000545825	C1orf167	Q5SNV9	1468 aa		32.55	■■■□□ 2.8
CCDC189-211	ENST00000545825	PHLPP1	O60346	1717 aa		32.55	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms